Saccharobesus litoralis: C2869_11880
Help
Entry
C2869_11880 CDS
T05408
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
cate
Saccharobesus litoralis
Pathway
cate03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cate00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C2869_11880 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cate03019
]
C2869_11880 (pnp)
03016 Transfer RNA biogenesis [BR:
cate03016
]
C2869_11880 (pnp)
Enzymes [BR:
cate01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
C2869_11880 (pnp)
Messenger RNA biogenesis [BR:
cate03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
C2869_11880 (pnp)
Transfer RNA biogenesis [BR:
cate03016
]
Prokaryotic type
tRNA degradation factors
C2869_11880 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
PNPase
RNase_PH_C
KH_1
OB_RRP5_4th
S1_RRP5
KH_2
KH-I_KHDC4-BBP
aRib
KH_SLS1_2
DUF3016
EFP
Motif
Other DBs
NCBI-ProteinID:
AWB67087
UniProt:
A0A2S0VSB0
LinkDB
All DBs
Position
3312686..3314785
Genome browser
AA seq
699 aa
AA seq
DB search
MLNPITHSFQYGQHTVTLETGMIARQASAAVMASMDDTSVLVSVVEKKSDEPRDFFPLTV
NYQEKAYAAGKIPGGFFKREGRPSEGETLIARLIDRPIRPLFPKAYCNEVQVVITVVSAN
PEIPTDVISMIGVSAALSIAGTPFQGPVGAARVGYKDGQYMLNPVISELPSSQLDLVVAG
TESAVLMVESEAEVLSEDVMLGAVVYGHEQSQAVIEGVKAFKAAVNPTESDWVAPEVNTE
LKEKVTAASKDGFTAAYQITDKMARYEAVGVVKAEALAKLLAEDEELDEGEIGDMLSSVE
KSVVRDRIIAGEPRIDGRDPESVRALDVRTGILPRTHGSSLFTRGETQAIVAATLGTPRD
AQIIDSLTGESTDNFMLHYNFPPYCVGETGMIGSPKRREIGHGRLAKRGVQAVMPSLDEF
PYTVRVVSEITESNGSSSMASVCGTSLALMDAGVPIKASVAGIAMGLVKEDDKFVVLSDI
LGDEDHLGDMDFKVAGTQEGVTALQMDIKIEGITKEIMQIALNQAKAARLHILNVMDEAI
SGHREEVSEFAPRIYEMKIDADKIRDVIGKGGATIRQLTEETETTIEIEDDGKVKIAATD
KSKAEAAMERIKQITAEVEVNQVYQGKVVRIVDFGAFVEVLPGKQGLVHISQISEERVEK
VQDYIQEGQEVTVKVLEIDRQGRVRLSMKAAVEKPEVAE
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgttaaatccaattacacattcttttcagtatggccaacatactgttactttagaaacg
ggtatgattgcccgccaagcaagtgccgctgttatggccagcatggacgacacatcagta
ctcgtttcagttgttgagaaaaaatcggatgaaccgcgtgactttttcccattaactgta
aactatcaagaaaaagcctatgctgcaggtaaaattccaggtggtttctttaagcgtgaa
ggtcgtccaagtgaaggcgaaaccttgatagcacgtcttattgaccgtccaatccgtcct
ttattccctaaagcttattgtaatgaagtacaagttgtgatcactgtggtttcagctaac
ccagaaattccaactgacgttatttcaatgataggtgtatctgcggcattatcaattgct
ggaacgccattccaaggccctgttggtgctgctcgtgttggttataaagatggtcaatac
atgttaaaccctgttatttctgaattaccaagcagccaacttgatttagtggttgctggt
actgaaagtgcagtgttgatggtggaatcagaagctgaagtattatctgaagatgtcatg
cttggcgctgttgtttatggtcatgagcaatctcaagctgtaatcgaaggtgttaaagca
tttaaagcagcggttaacccaaccgaatcagattgggtagcaccagaagttaatactgaa
ttaaaagagaaagtgacagccgcttctaaagacggttttacagcagcctatcaaatcaca
gataaaatggcgcgttatgaagctgtaggcgtagttaaagccgaagcattagcgaaattg
ctagccgaagatgaagagcttgatgaaggcgaaattggcgacatgctaagttcagttgaa
aaatcagttgtacgtgatcgcattatcgccggtgagccacgcattgatggtcgtgatcct
gaaagtgttcgtgctcttgatgttcgtacgggtattttaccacgtacacacggttcatct
ttattcactcgtggtgaaacacaagctattgtcgcagcgacgttaggtactccacgtgat
gcacaaatcatcgatagtctaacgggcgagtctactgataacttcatgttgcactataac
ttccctccatactgtgtaggtgaaactggcatgataggctcacctaagcgtcgtgaaatt
ggtcacggtcgtttggctaagcgcggcgtacaagcggttatgccaagccttgacgaattc
ccatacacagttcgtgttgtatcagagatcactgaatcaaacggttcaagctctatggct
tctgtttgtggtacctctttagcacttatggatgccggtgtaccgattaaagcgtctgta
gcgggtattgctatgggtctagttaaagaagatgacaagtttgtcgtgttatcagacata
ttaggtgacgaagaccacttaggtgacatggactttaaagtagcgggtacccaagaaggg
gttacagcgttacaaatggatatcaaaattgaaggtatcactaaagagatcatgcagatt
gctttgaaccaagcaaaagcggctcgtttacatattttgaatgttatggatgaagcgatt
tctggtcaccgtgaagaagtttctgagtttgcgcctcgcatatacgagatgaagattgac
gctgataagatccgtgatgttatcggtaaaggtggcgcaacaattcgccagcttactgaa
gagacagaaaccacaatcgaaatcgaagacgatggtaaagttaagatcgcagcaactgat
aaatctaaagcagaagcagcaatggagcgcattaagcaaattactgctgaagttgaagtg
aaccaagtttatcaaggtaaagttgtacgtatcgttgactttggtgcctttgttgaagtg
ttaccgggtaaacaaggtcttgttcatatttcacaaatctctgaagagcgtgttgaaaaa
gttcaagattacattcaagagggtcaagaagtcactgttaaggtacttgagattgaccgt
caaggccgcgtacgcttaagcatgaaagcggcagttgaaaagcctgaagtagctgaataa
DBGET
integrated database retrieval system
