Saccharobesus litoralis: C2869_13875
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Entry
C2869_13875 CDS
T05408
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
cate
Saccharobesus litoralis
Brite
KEGG Orthology (KO) [BR:
cate00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cate03016
]
C2869_13875 (rnd)
Enzymes [BR:
cate01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
C2869_13875 (rnd)
Transfer RNA biogenesis [BR:
cate03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
C2869_13875 (rnd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
Motif
Other DBs
NCBI-ProteinID:
AWB67460
UniProt:
A0A2S0VTP5
LinkDB
All DBs
Position
3848044..3849171
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AA seq
375 aa
AA seq
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MSFKRIESQSQLDALCAELAQRQVIAIDTEFVRQRTYFPKLGLIQINCGQQLYLIDPLPM
TDWQAFNAILSNANIIKVIHSCSEDIEVFKSALNSQLAGFFDTQIAEAFCSGTTALGLAV
LVERYCQVKLDKGHARTDWLQRPLAEAQLSYAADDVRWLLDVYQQQQQSLSDKSELVIND
VDAIINKKYEPLNAELAWRDIKSNWQLTSRQLAVLKELVEWRLNQALTRDLAVNFVVNER
SLVLLAQRQPTSLNSMKNIPGIHPMEIRKHGKAMLECIKRAKSLDISQCPEKVKRLSEQP
RYKTIYAQAKAKLQSIADANDVSIELLASKRQINQFIAYHWQLLPWSQEKQPELAVGWRG
QLVNQALLDIVLCEQ
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttaaacggattgaaagccaatcacaactcgatgcgctctgcgctgaactcgct
caacgtcaagttattgccatagacactgaatttgtccgccaacgaacttattttcctaag
ttggggttaattcaaattaattgtggtcaacaactgtatctaattgacccgttacccatg
acagattggcaagcgttcaatgctattttaagtaatgcgaatattattaaagttattcat
tcgtgtagtgaagatattgaagtgtttaaatcggcacttaacagccaattagcaggcttt
tttgatacacaaatagccgaagcgttttgttcaggtactaccgcattaggcctagcggta
ttggttgagcgttattgccaagttaaattagataaaggtcatgctagaacagattggtta
caacgaccattagctgaagcgcaattaagctatgcagctgatgatgtgcgttggttacta
gatgtttatcagcagcaacagcaaagcttatcagataaatctgaattagtgattaatgac
gtggatgccatcattaataaaaagtatgagcctctaaatgcagaattggcttggcgcgac
attaaatcaaattggcaattaacttctcgtcagttagcggtactaaaagagctcgttgaa
tggcgactgaatcaggcattaacccgtgatttagcggttaattttgtagtgaatgaacgc
agtttagttttattggctcaaagacaaccgacgagtctcaatagcatgaagaatattccg
ggtatccatcctatggagatccgcaaacatggaaaagccatgttggaatgcattaaacgg
gctaagtcgttagacattagtcaatgtccagaaaaggttaagcgtctatcagaacaaccc
agatataagacgatttacgctcaggcgaaagccaaactgcaatctatagctgatgcaaat
gatgtgagtattgagctacttgcttctaagcggcaaattaatcagtttattgcgtatcat
tggcagttgttaccttggagccaagaaaaacaacctgagctggctgttggctggcgcggt
caattagttaatcaagctttgttagatattgtgctctgcgagcaataa
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