Saccharobesus litoralis: C2869_15225
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Entry
C2869_15225 CDS
T05408
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
cate
Saccharobesus litoralis
Pathway
cate03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cate00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
C2869_15225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cate03400
]
C2869_15225
Enzymes [BR:
cate01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
C2869_15225
DNA repair and recombination proteins [BR:
cate03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
C2869_15225
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
C2869_15225
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
C2869_15225
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ExoI_SH3
ExoI_C
RNase_T
IF3_C
Motif
Other DBs
NCBI-ProteinID:
AWB67707
UniProt:
A0A2S0VU12
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All DBs
Position
4164338..4165777
Genome browser
AA seq
479 aa
AA seq
DB search
MSQQQSPSILWYDFETWGTSPKYDRPCQFAGIRTNYDLEIIGEPLNFYCYPASDYLPQPQ
ACLITGITPQLTFKKGTNEHQFMKKIHHELMQPNTVSCGYNTIRFDDEVTRYSLYRNLFE
PFSREWKNGNSRWDIIDMVRTCYALRPEDIEWPEREPGIPSFKLEHLTKANGLEHYAAHD
ALSDVYATIDIAKLIKSKQPKLFSYLFSLRNKHKVKELLDLEGLTPLVHISSKIPSSQGC
CTWIVPIAWHPTNANAVIVLDLTKSAQPLTELDTQALKQKLFTSSQDLQPDEERLPIKLV
HINKSPVLATAKSLSPDNAERLGIDRQQCLTNLQWIKQNHSAVKQKVIDLYQAMEFETES
DADFALYDGFIQDNDKQWLEKIQCSQPEHYAAMTPAFNDPRLQTLWFRFKARNYPDTLNE
AEQLKWQVFCRERLTQNIHKTQLTLEEFAQELENLAETVQNDESKIKILKALYQYIQNL
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgtcacagcaacaatcaccctctatcctttggtatgactttgaaacgtggggcacctct
ccaaaatatgatcgcccatgtcaatttgcaggcatacgtaccaactacgatttagaaatt
attggcgaaccgcttaatttttattgctatcctgctagtgactatttacctcaacctcaa
gcctgtttaatcactgggataacgccgcaacttacatttaaaaaaggcacaaatgaacat
caatttatgaagaaaattcatcatgaattgatgcagccgaatacggttagctgtgggtac
aacacaatccgcttcgacgatgaagtcacacgctacagcttataccgtaatttatttgaa
cctttcagtcgagaatggaaaaacggcaatagccgatgggacataatagacatggtcaga
acctgttatgcattgcgcccagaagatattgaatggccagaacgtgagccaggtatacct
agctttaaattagaacatttaacaaaagctaatggtttagagcactacgctgcgcatgat
gcattgagtgacgtatatgcgacaattgatattgctaaactgatcaaatccaaacaaccg
aaacttttttcgtatctattttcgttacgcaataagcacaaagtaaaagaattacttgat
ttagaaggcctaactccactggttcatatttcatcaaaaatccctagttcacaaggttgc
tgtacttggatagtgccaattgcatggcatccgactaacgccaatgccgttatcgtttta
gatttaaccaaatcagcacaaccactaaccgagttagatacacaagcccttaaacagaaa
ctatttacgtcttcacaagacttacaacctgatgaagagcgtctcccaataaaactggtg
catataaataaatcacctgtattagcaaccgctaaaagcttatctccagacaatgcagaa
agattaggcatagacaggcaacagtgtttaactaatttacagtggattaaacaaaatcat
tcagctgtaaaacaaaaagttatcgacctttatcaagccatggagtttgaaacagaatct
gacgcagactttgctttgtatgatggttttattcaagacaatgacaaacaatggctagaa
aaaatacaatgtagccagcctgagcactatgcagccatgacacccgcttttaatgatcct
cgcttacaaaccttatggtttagatttaaagcacgtaattatccagacacgctaaacgaa
gctgaacaattaaagtggcaagtattttgtcgggaaagactgactcaaaacatacataaa
acgcaattaacattagaagagtttgcccaagagttagaaaatttggccgaaacagtccaa
aatgatgaaagtaaaataaaaatccttaaagcgctataccaatacattcaaaacttataa
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