Saccharobesus litoralis: C2869_16820
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Entry
C2869_16820 CDS
T05408
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
cate
Saccharobesus litoralis
Pathway
cate03410
Base excision repair
cate03430
Mismatch repair
cate03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cate00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C2869_16820 (recJ)
03430 Mismatch repair
C2869_16820 (recJ)
03440 Homologous recombination
C2869_16820 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cate03400
]
C2869_16820 (recJ)
DNA repair and recombination proteins [BR:
cate03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
C2869_16820 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
C2869_16820 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
C2869_16820 (recJ)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Glyco_transf_4
2-ph_phosp
Motif
Other DBs
NCBI-ProteinID:
AWB67983
UniProt:
A0A2S0VUX4
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Position
complement(4521927..4523642)
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AA seq
571 aa
AA seq
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MSASIIRRQPEQVGGLPSSVHPLLRRVLANRGINQPELLELSAKALPKPQLKGLEQAVSI
LIDAIKQQLKIIVVGDFDADGATSTALSVMSLKQLGSRNVDFLVPNRFDFGYGLSPQIVD
VAAQHGAQVIMTVDNGISCIAGVERAKQLGIKVIVTDHHLPGDVLPNADAIVNPNQVDCP
FPSKNLAGVGVAFYLMLAVRGQLRAENFFADQQIPEPNLAEYLDLVALGTVADVVKLDHV
NRILVQQGLNRIRQGYCRPGIKALLDVADRNPQFLVSSDFGFALGPRLNAAGRLDDMTLG
ISCLMAQDYSNAIMLAARLDELNKERREIESGMQAEAMATLEKTQVDGSASGICLFDETW
HQGVIGIVAGRIKEQYYRPTVVFAEGDNDELKGSCRSIPGFHIRDALEFIDTRQPGLVIK
FGGHAMAAGLSIRKHDYAVFKQAFELAVSKLIEPECLQHCIYSDGGLDGNYLTTQVADLL
KRAMPWGQAFPEPIFDDEFIVINERILKDKHLKLVLQHPSGLSYDAIWFNYDQSLWRAQQ
IHQVRVAYVLDTNTFRGKTSVQMMIRAMEVL
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
gtgtcagccagtattattcgccgtcaacctgaacaagttggcggtttaccttcttctgtt
caccctttgctacgccgtgttttagccaatcgcggtattaatcaaccagaattacttgag
ttatcggcaaaagccttacctaaacctcagctcaaagggttagagcaagccgttagcatt
ttaattgatgcgataaaacaacaacttaagattattgtggttggtgattttgacgccgat
ggcgcgaccagtacggccttaagcgtaatgtcgttaaaacaattaggtagtcgcaatgtc
gattttctggtgccgaatcgttttgactttggttatggtttgtcgccacaaatagtggat
gtagcggcacaacatggcgctcaagtgattatgacggtagacaatgggatatcttgtatt
gccggtgttgaacgagccaagcaattaggtattaaagtgattgtaacagatcaccattta
ccgggtgacgtgttgcccaatgccgacgccattgttaatcctaaccaagttgactgcccg
ttcccgagtaaaaatttagctggggttggggtggcgttttacttaatgttggcggtgcgc
gggcagttacgcgccgaaaacttttttgcggatcaacaaataccagagcccaatttagcc
gaatacttagatttggtggcattagggacggtagccgatgtcgtcaagttggatcatgtt
aatcgtattttagtgcaacaagggttaaatcggatccgccaaggatattgtcgaccgggg
atcaaagcattgcttgatgtggccgatcgcaacccgcaatttttagtgtcgagtgatttt
ggttttgccttgggaccacgtttaaacgccgccggtcgattagatgacatgactttaggc
attagttgtttaatggcgcaggactacagtaatgccattatgctggcagcgcgattagat
gagcttaataaagaacgccgtgaaattgaaagcggaatgcaagccgaagccatggcgacg
ctcgagaaaacccaagtagatggttctgcatcgggcatttgtctgtttgatgaaacttgg
catcaaggggttattggtattgttgctggacgcattaaagagcaatactaccgacccaca
gtggtttttgctgaaggtgacaatgatgaattaaaaggttcctgccgctcgatacccggt
tttcatattcgtgatgcacttgaattcatagatacacgccaacctgggttagtgattaaa
tttggtggacatgccatggcagcgggcttgtctattcgcaagcatgactatgcggtattt
aaacaggcctttgagttagccgtaagcaagctcattgaaccagaatgtttacagcattgt
atatattctgacggcggcttagatggcaattatttaacgacgcaagtggcggatttacta
aaacgtgcgatgccttgggggcaggcgtttccagagcctatttttgatgatgagtttatt
gttattaacgaacgcattctcaaagataagcatcttaagttagtgttacagcacccaagt
ggcttaagttatgacgcgatctggtttaactatgatcaatcgctgtggcgcgcgcaacaa
attcatcaagtgcgggtagcttacgttttggacaccaatacatttcgcggaaaaaccagc
gtacaaatgatgatccgcgcgatggaagtgctgtaa
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