Saccharobesus litoralis: C2869_21585
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Entry
C2869_21585 CDS
T05408
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
cate
Saccharobesus litoralis
Pathway
cate03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cate00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C2869_21585 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cate03021
]
C2869_21585 (rho)
03019 Messenger RNA biogenesis [BR:
cate03019
]
C2869_21585 (rho)
Transcription machinery [BR:
cate03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
C2869_21585 (rho)
Messenger RNA biogenesis [BR:
cate03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
C2869_21585 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
AAA_25
AAA
AAA_22
OB_RNB
S1CSD-TOTE-2
DnaB_C
Motif
Other DBs
NCBI-ProteinID:
AWB68832
UniProt:
A0A2S0VXD2
LinkDB
All DBs
Position
complement(5635066..5636334)
Genome browser
AA seq
422 aa
AA seq
DB search
MNLTELKQKPISELVQLAESMGLENMARLRKQDIIFAILKNHAKSGEDIFGDGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTLSGKIRPPKDGERYFALLKINQVN
FDRPENSRNKILFENLTPLHATDRMIMERGNGSKEDITARVLDLASPIGKGQRALLVAPP
KAGKTMLLQNIAQSIAANHPECQLMVLLIDERPEEVTEMQRLVRGEVVASTFDEPASRHV
QVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVIPSSGKVLTGGVDANALHKPKRF
FGAARNVEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNSEIHLNRKIAEKRVFPAIDI
NRSGTRREELLTSSEELQKMWILRKIVHEMTEIDAMEFMIDKLSMTKTNDEFFEAMKRQR
SQ
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgaacttaacagaactcaaacaaaaacctattagtgagcttgtacagttagccgagtct
atgggactggaaaacatggctcgtttacgcaagcaggacattatttttgccattcttaaa
aaccacgcaaaaagtggtgaagatatttttggagatggcgtattagagattctgcaagat
ggttttggttttttaagatcagctgactcatcatacttagctggtccagacgacatttat
gtatcaccttcgcaaatccgccgttttaacttacgtacaggtgatactttatctggcaaa
attcgcccaccgaaagacggcgagcgttattttgcattattaaaaattaaccaagttaat
tttgatcgcccagaaaattcacgcaataaaattctttttgaaaacttaacgccattacat
gcgactgatcgtatgattatggaacgcggtaacggttcaaaagaagatattaccgctcga
gtacttgatttagcttcacccattggtaaaggtcagcgtgccttattggttgcaccgccg
aaggccggtaaaaccatgttattgcaaaatattgctcaatcgattgccgctaaccaccct
gaatgtcaattaatggtgttattgattgacgagcgtccggaagaagtgactgaaatgcaa
cgtttggtacgtggtgaagtggtagcgtcaacatttgatgagcctgctagccgtcacgtt
caggtagctgaaatggttatagaaaaagccaagcgtttagttgagcataaaaaagacgtg
gttattttacttgactctattacccgtttagctcgtgcttataacacggttattccttct
tcaggtaaggtattaaccggtggtgttgatgccaatgcattacataaacctaagcgtttc
tttggtgctgctcgtaacgtagaagaaggtggtagtttaactattattgcaactgcgctt
attgataccggctctaaaatggatgaagttatctatgaagagtttaaaggaaccggtaac
tctgaaatccacttaaatcgtaagattgctgaaaaacgtgttttccctgctattgatatt
aaccgttcaggtacacgtcgtgaagagttgttaacctcttctgaagagctgcagaaaatg
tggattctacgtaagatcgttcatgaaatgacagaaatcgatgcgatggaatttatgatc
gacaagttatccatgactaaaactaatgacgagttttttgaagctatgaagcgtcaaaga
agtcagtag
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