Saccharobesus litoralis: C2869_21595
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Entry
C2869_21595 CDS
T05408
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
cate
Saccharobesus litoralis
Pathway
cate03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cate00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C2869_21595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cate03019
]
C2869_21595
Enzymes [BR:
cate01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
C2869_21595
Messenger RNA biogenesis [BR:
cate03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
C2869_21595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AWB68834
UniProt:
A0A2S0VXA3
LinkDB
All DBs
Position
5636988..5638268
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AA seq
426 aa
AA seq
DB search
MNSKKHLTETKFSDLNLDPRIQQALDDAQFVYCTPIQEKSLPLAIKGQDIAGQAQTGTGK
TMAFLLATFNYLITHPREDEADKRPRALILAPTRELAVQIHKDAALLAKHTGFSLALIYG
GEGYDEQRAQLESGADIIVGTTGRIIDYYKQGEINLSGIQVVVLDEADRMFDLGFIKDIR
FLFRKMPEPTQRLNLVFSATLSHKVKELAYEHMGEPVDVYVEPEKMLSGRISEEIFFPAQ
PDKMLLLLTLMEEEWPEKAIVFCNTKHDCEDVANWLKADKHRVGLLTGDVSQKKRLSILN
HFTKGNLDILVATDVAARGLHISDVSHVFNYDLPDDYEDYVHRIGRTGRAGKTGTAISFA
CEKYVYNLPAIEEYIGHAIPVAQYNADALLDDVIPPAPVARKPYRGNRPNGSRPNKANRG
NRNYNR
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgaatagcaaaaaacacttaacagaaaccaagtttagtgatctaaacctagatcctcgc
atccaacaagccttggatgacgcacaatttgtctactgtacgccaatccaagagaagagc
ttgcctttagctattaaaggtcaagatatcgcaggccaagcacaaacaggtacgggtaaa
accatggccttcctgctggctacttttaattatttaattactcaccctcgtgaagacgaa
gctgataaacgtccgcgtgcgctgattttagcgccaactcgtgaactagcggtgcaaatt
cataaagatgctgcattactagccaagcatacgggattttcacttgcgttgatctacggt
ggtgaaggatacgatgagcaacgcgcccaattagagtctggggctgatattattgtcggc
acgacaggacgcattattgattactataagcagggcgaaataaatctgtctggtattcaa
gtggttgtactggatgaagcagatcgtatgtttgatcttggttttatcaaagacatccgc
tttttattccgcaaaatgccagagcctactcaacgtctcaatttggttttttcagctacc
ttatcccataaagttaaagagttggcttatgaacatatgggtgaaccggttgatgtctat
gttgagccggaaaaaatgctatcagggcgcatcagtgaagaaatattcttccctgcccaa
cctgacaaaatgctgttgttattaaccctgatggaagaagaatggccagaaaaagccatt
gttttttgtaacactaaacatgattgcgaagacgttgcaaactggcttaaagccgacaag
caccgtgtaggattactcactggcgatgtcagccagaaaaagcgcctaagtattttaaat
cactttactaaaggcaacttggatatattagtcgcaaccgatgtagctgcgcgagggttg
catatttcagatgtcagtcatgtatttaattatgacttgcctgatgattacgaagattat
gtacatcgcataggccgtacaggtcgcgcgggtaaaacggggacagccattagttttgcg
tgtgaaaagtatgtatacaacctaccggccatcgaagaatatatcggccacgcgatccct
gttgcgcaatataacgctgatgcattgttagacgacgttattccgccagcccctgtggct
cgcaaaccttatcgtggcaacagacctaacggaagtcgtccgaataaggctaatcgcggc
aataggaactacaatagataa
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