Catellatospora sp. IY07-71: CS0771_07270
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Entry
CS0771_07270 CDS
T07191
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
cati
Catellatospora sp. IY07-71
Pathway
cati03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cati00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CS0771_07270 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cati03021
]
CS0771_07270 (rpoC)
03400 DNA repair and recombination proteins [BR:
cati03400
]
CS0771_07270 (rpoC)
Enzymes [BR:
cati01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CS0771_07270 (rpoC)
Transcription machinery [BR:
cati03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CS0771_07270 (rpoC)
DNA repair and recombination proteins [BR:
cati03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CS0771_07270 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
BCJ71183
UniProt:
A0A810NIH4
LinkDB
All DBs
Position
complement(794728..798618)
Genome browser
AA seq
1296 aa
AA seq
DB search
MLDVNFFDELRIGLAGAEDIRRWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPQRDWEC
YCGKYKRVRFKGIVCERCGVEVTRSKVRRERMGHIELAAAVTHIWYFKGVPSRLGYLLDL
APKDLEKIIYFASYVITSVDAEARHRDMTTIENEIFAEKRQAENARDAEIEKRAVKLESD
LAELEAEGAKADVRRKVKEAGEREMRQIRDKAQREIDRLDEVLDTFRKLDSKQLVTDELL
YRELRDRFGEYFTGGMGAEAIKALVQNMDLEAEADSLRETIRSGKGQRKLRALKRLKVVA
AFLATGNSPLGMVLDCVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLIDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPRLKLHQCGLPKQMALELFKPFVMKRLVDLNHAQNIKSAKRMVERQR
PVVWDVLEEVITEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQIHPLVCTAFNADFDGDQ
MAVHVPLSAEAQAEARILMLSSNNILKPADGKPVTMPTQDMIIGLYHLTHKRTGMVGEGR
VFSSEAEAMMAFDNGELHLQAPVRIRLKGVTSVDNGPGAEAWTAPEEWEPNEPLILDTTL
GRVLFNETLPVGYRFVNHEVRKGQLSGIVNDLAERYPKVALAATLDALKEAGFHWATWSG
VTIGMEDVISPPRKGQILERYEKEAERFDKQYQRGLMTAEERRGELIELWTKATNEVAKE
LETALPLENPLWRMIHSGARGNMLQLRQIAAIRGLVANPKGEIIPRPIKSSYREGLSVLE
YFISTHGARKGLADTALRTADSGYLTRRLVDVSQDVIIREDDCGTDRAIPMQIGTRHDGV
LSVHEHAETGAHARTLAEDMSDPSGNLVAARGTDLNSIVVDKLVKAGIENVRVRSVLTCE
SKLGVCAACYGRSLPTGKLVDVGEAVGIIAAQSIGEPGTQLTMRTFHTGGAASGEDITQG
LPRVQEIFEARVPKGKAPIADTPGRIRIEAGDRSKKIIIVPDDGSEEIVHDKISNRVKLR
VHDGAHVEVGEKLTEGTIDPHELLRIMGPRAVQVHLTNEVQEVYRSQGVMIHDKHIEIII
RQMLKRVTIIDSGATEFLPGVLVDRAQFEGENRRLVSEGGEPAAGRPVLMGITKASLATE
SWLSAASFQETTRVLTDAAINARSDSLIGLKENVIIGKLIPAGTGISKYRNVRVEPTEEA
KAKVYSMTSYGETDYGFGPASGVAVPLDDFDFGSYR
NT seq
3891 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgttaacttcttcgatgagcttcggatcggcctggcgggcgctgaagacatc
cggcgctggtcgcacggcgaggtcaagaagcccgagaccatcaactaccgcaccctgaag
cccgagaaggacggactcttctgcgagaagatcttcggtccgcagcgggactgggagtgc
tactgcggcaagtacaagcgggtccgcttcaagggcatcgtctgtgagcgctgcggcgtc
gaggtgacccggtccaaggtgcgccgtgagcgcatgggccacatcgagctcgccgccgcg
gtcacccacatctggtacttcaagggcgtgccgagccggctgggctacctgctggacctc
gcgcccaaggaccttgagaagatcatttacttcgcctcgtacgtgatcacgagcgtggac
gccgaggcgcgtcaccgcgacatgaccaccatcgagaacgagatcttcgccgagaagcgg
caggccgagaacgcccgcgacgccgagatcgagaagcgagcggtcaagctcgagtccgac
ctggccgagctggaggccgagggcgccaaggcggacgtgcgccgcaaggtcaaggaggcc
ggcgagcgcgagatgcgccagatccgcgacaaggcgcagcgcgagatcgaccgcctggac
gaggtgctggacacgttccgcaagctcgactccaagcagctggtcaccgacgagctgctc
taccgcgagctgcgcgaccgcttcggtgagtacttcaccggcggcatgggcgccgaggcc
atcaaggccctggtccagaacatggacctggaggccgaggccgactcgctgcgcgagacc
atccgctcgggcaaggggcagcgcaagctgcgcgcgctcaagcggctcaaggtcgtggcc
gcgttcctggccaccggcaactcgccgctgggcatggtgctcgactgcgtcccggtcatc
ccgccggacctgcgcccgatggtgcagctcgacggcggccgcttcgcgacgtccgacctg
aacgacctgtaccgccgggtcatcaaccgcaacaaccgcctcaagcgtctgatcgacctc
ggcgcgcccgagatcatcgtgaacaacgagaagcggatgctgcaggaggccgtcgacgcg
ctgttcgacaacggccgccgtggccggccggtgaccggtccgggcaaccgcccgctcaag
tcgctgtccgacatgctcaagggcaagcagggccggttccgccagaacctgctcggcaag
cgcgtggactactcgggccggtccgtgatcgtcgtcggcccgcggctgaagctgcaccag
tgcggtctgcccaagcagatggcgctggagctgttcaagccgttcgtgatgaagcggctg
gtcgacctgaaccacgcccagaacatcaagtccgccaagcgcatggtcgagcggcagcgc
ccggtcgtgtgggacgtgctggaagaggtcatcaccgagcacccggtgctgctcaaccgc
gcgcccaccctgcaccgcctgggcatccaggcgttcgagccgcagctggtcgagggcaag
gcgatccagatccacccgctggtctgcaccgccttcaacgccgacttcgacggcgaccag
atggcggtgcacgtgccgctgtccgccgaggcccaggccgaggcgcgcatcctcatgctg
tccagcaacaacatcctcaagccggccgacggcaagccggtgaccatgcccacccaggac
atgatcatcgggctgtaccacctgacccacaagcgcaccggcatggtgggcgagggccgg
gtgttcagctccgaggccgaggcgatgatggccttcgacaacggcgagctgcacctgcag
gcgccggtgcggatccgcctcaagggcgtcacctcggtcgacaacgggccgggcgccgag
gcgtggaccgcgccggaggagtgggagccgaacgagccgctgatcctggacaccacgctg
ggccgggtcctgttcaacgagaccctcccggtgggctaccggttcgtcaaccacgaggtc
cgcaagggccagctctcgggcatcgtgaacgacctcgccgagcgctaccccaaggtcgcc
ctggcggcgacgctggacgcgctcaaggaggccggcttccactgggccacctggtctggc
gtcaccatcggcatggaggacgtcatctcgccgccgcgcaagggccagatccttgagcgg
tacgagaaggaggccgagcgcttcgacaagcagtaccagcgtggtctgatgaccgccgag
gagcgccgcggcgagctgatcgagctgtggaccaaggcgaccaacgaggtggccaaggag
ctggagaccgcgctgccgctggagaacccgctgtggcgcatgatccactccggcgcgcga
ggcaacatgctgcagctgcgtcagatcgcggcgatccgtggtctggtggccaacccgaag
ggtgagatcatcccgcggccgatcaagtcctcgtaccgcgagggcctgagcgtgctggag
tacttcatctccacgcacggcgcccgcaagggtctggccgacaccgcgctgcgtaccgcc
gactcgggttacctgacccgtcgtctggtggacgtctcgcaggacgtgatcatccgcgag
gacgactgcggcaccgaccgcgcgatcccgatgcagatcggcacgcgccacgacggtgtg
ctgtcggtgcacgagcacgccgagaccggcgcgcacgcccgcaccctggccgaggacatg
tcggacccgtccggcaacctcgtcgcggcccgcggcaccgacctcaactcgatcgtcgtc
gacaagctggtcaaggccggtatcgagaacgtccgggtgcgctccgtgctcacctgcgag
agcaagctgggcgtctgcgcggcctgctacggccgttcgctgccgaccggcaagctggtg
gacgtcggcgaggccgtcggcatcatcgcggcgcagtccatcggtgagcccggtacgcag
ctgacgatgcgtaccttccacaccggtggtgcggcctcgggtgaggacatcacccagggt
ctgccgcgtgtccaggagatcttcgaggcgcgggtgcccaagggcaaggcgccgatcgcg
gacactcccggccgcatccgcatcgaggccggcgaccggtcgaagaagatcatcatcgtg
ccggacgacggcagcgaggagatcgtccacgacaagatctcgaaccgcgtcaagctgcgc
gtgcacgacggcgcccacgtcgaggtcggcgagaagctgaccgagggcaccatcgacccg
cacgagctgctgcgcatcatgggcccgcgcgcggtccaggtccacctgaccaacgaggtc
caggaggtctaccgctcgcagggcgtgatgatccacgacaagcacatcgagatcatcatc
cgccagatgctcaagcgcgtgacgatcatcgactcgggtgccacggagttcctgccgggc
gtcctggtcgaccgggcacagttcgagggcgagaaccggcgcctggtctccgagggcggc
gagcccgcggccggccggccggtgctgatgggtatcaccaaggcgtcgctggcgaccgag
tcgtggctctcggcggcctccttccaggagaccacccgggtgctcaccgacgcggccatc
aacgcgcgcagtgactcgctcatcggtctcaaggagaacgtcatcatcggcaagctcatc
ccggcgggtaccggcatcagcaagtaccgcaacgtccgggtggagccgaccgaggaggcg
aaggccaaggtctactccatgacctcgtacggcgagaccgactacggcttcggcccggcg
tccggtgtcgcggtgccgctggacgacttcgacttcgggtcgtaccggtaa
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