Catellatospora sp. IY07-71: CS0771_25560
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Entry
CS0771_25560 CDS
T07191
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
cati
Catellatospora sp. IY07-71
Brite
KEGG Orthology (KO) [BR:
cati00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cati03016
]
CS0771_25560 (rnd)
Enzymes [BR:
cati01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
CS0771_25560 (rnd)
Transfer RNA biogenesis [BR:
cati03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CS0771_25560 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
BCJ73012
UniProt:
A0A810NGL0
LinkDB
All DBs
Position
complement(2839743..2841083)
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AA seq
446 aa
AA seq
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MTDEDAPLRRRTRHRTPTGEVAPDGTSNGAGPRLLTEPADGTPAPVDTPAGLAEVVARFA
AGTGPVAVDAERASGFRYSQRAYLVQLRRKGAGTALIDPVPLPDLSALDEVLADTEWVLH
AASQDLPCLSEVGLRPRRLFDTELAARLADFERVGLAALTEQLLGRTLEKHHSAADWSTR
PLPHDWLTYAALDVELLVELRDALDVELARQGKSEWAAEEFAALVAGGARPPRQRTDPWR
RTSGMHRVRGARAQARVRSLWYARDAIAVRRDTAPGRVLPDAAIVAAAEMNPKTERELLL
LPGFGGRSVRRLAATWLEALEDARSLPDDALPTTPQFDGPPPPHRWADKDPEAAARLARC
KEVVTRTAEEHHLPPENLITPDFVRRLAWEPPVEPDAATVTEVLRGFGARPWQCGLLAGE
LAQALLVPPPAAETDEEAEETPGDGS
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgaggacgcacccctgcgccgtcggacccgccaccgcacgccgacgggcgag
gtggcgccggacgggacgtcgaacggcgcgggaccgaggctgctgaccgagccggccgac
ggcacccctgccccggtcgacacacctgccggcctggccgaggtggtggcccgtttcgcc
gcgggcaccggcccggtcgcggtggacgccgaacgggcctccggcttccgctacagccag
cgggcatacctggtccagctgcgccgcaagggggccggcacggctctgatcgaccccgtg
ccactgcccgatctgtcggctttggacgaggtgctggccgacaccgagtgggtgctccac
gcggccagccaggacctgccgtgcctgtccgaggtgggtctgcggccgcgccgtctcttc
gatacggaattggccgcccggctggccgacttcgagcgggtcgggcttgccgcgctgacc
gaacagctactgggccgcaccctggagaagcatcattcggcggccgactggtcgacccgg
ccgctgccgcacgactggctgacctacgccgcgctcgacgtcgagctgctcgtggagctg
cgcgacgcgctcgacgtggagctggcccggcagggcaagtccgaatgggctgccgaggag
ttcgccgcgctggtcgccgggggcgcccggccgccccggcagcgcaccgacccgtggcgg
cgcacctccggcatgcaccgggtgcggggcgcccgcgcccaggcccgggtgcggtcgctg
tggtacgcccgggacgccatcgcggtgcgccgggacaccgcgcccggccgggtgctgccc
gacgcggcgatcgtcgcggcggccgagatgaacccgaagaccgagcgcgagctgctgctg
ctgcccggcttcggcgggcgctcggtgcgccggctcgcggcgacctggctggaggcgctg
gaggacgcgcgcagcctgcccgacgacgcgctgccgacgacgccgcagttcgacggcccg
ccgccgccgcaccgctgggcggacaaggacccggaggccgccgcgcgcctggcccgctgc
aaggaggtggtgaccaggaccgccgaggagcaccacctgccgccggagaacctgatcacc
ccggacttcgtacgccggctggcgtgggagccgccggtggagccggacgccgccacggtc
accgaggtgctccgcggcttcggcgcccggccctggcagtgcggcctgctcgcgggcgag
ctggctcaggcgctgctcgtcccgcccccggcggcggagacggacgaggaggccgaggag
acgcccggcgacggctcctga
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