Catellatospora sp. IY07-71: CS0771_45930
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Entry
CS0771_45930 CDS
T07191
Symbol
cshA
Name
(GenBank) DEAD-box ATP-dependent RNA helicase CshA
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
cati
Catellatospora sp. IY07-71
Pathway
cati03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cati00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CS0771_45930 (cshA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cati03019
]
CS0771_45930 (cshA)
03009 Ribosome biogenesis [BR:
cati03009
]
CS0771_45930 (cshA)
Enzymes [BR:
cati01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CS0771_45930 (cshA)
Messenger RNA biogenesis [BR:
cati03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CS0771_45930 (cshA)
Ribosome biogenesis [BR:
cati03009
]
Prokaryotic type
rRNA helicases
CS0771_45930 (cshA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
WSD
Motif
Other DBs
NCBI-ProteinID:
BCJ75049
UniProt:
A0A810NSX0
LinkDB
All DBs
Position
complement(5174533..5176257)
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AA seq
574 aa
AA seq
DB search
MSQEQTRTSSEDTTAFIDLGLRPELLKALATLGYEEPTPIQREAIGPLLAGRDLLGQAAT
GTGKTAAFALPVLQQWADGIEGRKSTDPVALILVPTRELAVQVSEAFHRYGRDLGVQVLP
IYGGQPIGRQLQALRRGVDIVVATPGRALDHIGRGTLRLADLRTVVLDEADEMLDMGFAE
DIEAILQETPDTRQTVLFSATMPSRVDGLVKRYLRNAIRIQMGRAAAAPGESPKVRQSAY
VVARAHKPAALGRVLDVEAPAAAIVFCRTREEVDQLTETMNGRGFRAEALHGGMSQEQRD
RVMGRLRAGTADLLVATDVAARGLDIEQLTHVINYDVPSAPEAYVHRIGRVGRAGREGVA
VTLAEPREHRMLKAIERVTKQRITMEKIPTVADMRSRRLEMTRAALQENLLEGDFDRFRV
VVETLADEFDIVEVALAAVKLAHETMGNAPDDETIPDIAEPPADRRDRSGPGAGRRDSAR
GARTAAGAVKLFIGLGRRDGVRPQDLVGAIAGESGLAGRDIGAIEIADRFSLVEVPAAAA
DHVIDALRTATIKNKRVSVRLDRDREAPARRQRW
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaggaacagacccggacctcgtccgaggacaccaccgccttcatcgacctggga
ctgcggcccgaactgctgaaggcgctggccacgctcggctatgaggaaccgacgccgatc
cagcgcgaggccatcggaccgctgctggcaggccgtgacctgctcggccaggccgccacc
ggtaccggcaagaccgctgcgttcgcactgccggtgctgcagcagtgggccgacggcatc
gagggccgcaagagcaccgatccggtggcgctcatcctggtcccgacccgcgaactcgcc
gtgcaggtctccgaagccttccaccgctacggccgcgacctcggcgtacaggtgctgccc
atctacggcggccagcccatcggccgccaactgcaggcgttgcggcgcggcgtcgacatc
gtcgtggccacccccggccgggccctggaccacatcggccggggcacgctgcggctggcc
gacctgcgcaccgtcgtgctggacgaagccgacgagatgcttgacatgggcttcgccgag
gacatcgaggccatcctgcaggagacgcccgacacccggcagaccgtactgttctcggcc
accatgccgtcgcgggtggacggtctggtcaagcgctacctgcgtaacgcgatccggatc
cagatgggccgggccgctgccgcgccaggcgagtcgccgaaggtccggcagagcgcctac
gtggtggcccgcgcgcacaagccggccgcactgggccgggtgctcgacgtcgaagccccc
gcggccgcgatcgtcttctgccgtacccgcgaggaggtcgaccagctcaccgagaccatg
aacggccgcggcttccgggccgaggcgctgcacggcgggatgagccaggagcagcgcgac
cgggtgatgggccggctgcgcgccggcaccgccgacctgctggtcgccaccgacgtcgcc
gcccgcggcctggacatcgagcagctcacccacgtgatcaactatgatgtgccgtcggcg
ccggaggcctacgtgcaccgcatcggccgagtcggccgcgccggtcgcgaaggcgtcgcc
gtcaccctcgccgaaccccgcgagcaccggatgctcaaggcgatcgagcgggtcaccaag
cagcgcatcaccatggagaagatccccaccgtcgccgacatgcgctcccgccggctggag
atgacccgcgccgccctgcaggagaacctgctcgaaggcgacttcgaccggttccgggtc
gtcgtcgagacgctggccgacgagttcgacatcgtcgaggtcgcactggccgccgtcaaa
ctcgctcacgagacgatgggcaacgcacccgacgacgagacgatcccggacatcgccgag
ccgcccgccgaccgtcgtgaccggtccggccccggtgccggccgccgcgacagcgcccgc
ggcgcccgtaccgcggcgggtgcggtcaagctcttcatcgggctcggccgccgcgacggt
gtacgcccccaggatctggtcggcgcgatcgccggggagtcgggcctggccggccgcgac
atcggcgctatcgagatcgccgaccggttctcgctggtcgaggtccctgcggcggcggcc
gaccacgtcatcgacgcgcttcggaccgcgaccatcaagaacaaacgcgtcagcgtacgg
cttgatcgcgaccgggaagcgccggctcgtcgccaacgctggtag
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