Corynebacterium atrinae: CATRI_00025
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Entry
CATRI_00025 CDS
T09346
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
catr
Corynebacterium atrinae
Brite
KEGG Orthology (KO) [BR:
catr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
catr03032
]
CATRI_00025 (gyrB)
03400 DNA repair and recombination proteins [BR:
catr03400
]
CATRI_00025 (gyrB)
Enzymes [BR:
catr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CATRI_00025 (gyrB)
DNA replication proteins [BR:
catr03032
]
Prokaryotic type
DNA Topoisomerases
CATRI_00025 (gyrB)
DNA repair and recombination proteins [BR:
catr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CATRI_00025 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
WJY62130
LinkDB
All DBs
Position
5022..7076
Genome browser
AA seq
684 aa
AA seq
DB search
MANAEHNYDASSITILEGLEAVRKRPGMYIGSTGTRGLHHLVWEVVDNSVDEAMAGEATK
VEVTLLHDGGVQVVDDGRGIPVEMHPSGAPTVQVVMTQLHAGGKFDSDSYAVSGGLHGVG
ISVVNALSTRVEADIKREGKHWLQNFNNAVPEDLVEGGNARGTGTTIRFWPDGEIFEDTE
FNYDVIARRLQEMAFLNKGLTITLKDERVSEAELELEALAEEGDTAQPIDGSSFDDIEAE
EAPAGAAPKTPKKREKKVVYHYPDGLVDYVNHLNKSKSVIHPSIVGFEAKGDDHEVEVAM
QWNSGYKESVHTFANTINTHEGGTHEEGFRSALTSLVNKYARDHRLIKDKDPNVTGEDCR
EGIAAVVAVRVGDPQFEGQTKTKLGNTEIRSFVQRMVNSHVGDWLEANPAEAKAIVSKAV
SSSQARIAARKARELVRRKSATDLGGLPGKLADCRSKDPSASELYIVEGDSAGGSAKAGR
DSMYQAILPLRGKILNVEKARMDKVLKNAEVQAIITALGTGIHEEFDISRLRYHKIVLMA
DADVDGQHIATLLLTLLFRFMPQLIEEGHVYLANPPLYKLKWRSGEPGYAYSDAERDREL
EEGLAAGRKINTDDGIQRYKGLGEMNPSELWETTLDPHTRLLRRVDLLDAQRADELFSIL
MGDDVAARRSFITRKAKDVRFLDV
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaacgctgaacacaattacgacgcgtcatcgatcacgattctcgagggtcttgaa
gccgtccgtaaacgccccggcatgtacatcggttcgaccggtacccgcggccttcaccac
ctggtgtgggaggtcgtggacaactcggtcgatgaggcgatggctggtgaggccaccaag
gtcgaggtcaccttgctccacgacggcggagtccaggtcgtcgatgacggccgcggcatc
cccgtcgaaatgcacccgtccggagcaccaactgtccaggtcgtcatgacccagttgcac
gccggcggcaagttcgattccgattcctatgctgtctccggtggcctccacggcgtcggt
atctcggttgttaacgcgctgtcgacccgcgttgaggcggatatcaagcgcgagggcaag
cactggctgcagaacttcaacaacgccgtgcccgaggatctcgtcgagggtggcaacgcc
cggggcaccggcaccacgattcggttctggccggacggtgagatcttcgaagataccgag
ttcaactacgacgtcatcgcgcgccgcctgcaggagatggccttcctcaacaagggcctg
accatcacgctcaaggatgagcgcgtctccgaggcagaactcgagttggaggctctcgcc
gaggaaggtgacaccgcccagccgatcgacggttcctccttcgatgacatcgaggcggag
gaggccccggccggtgctgctccgaagacaccgaagaagcgggaaaagaaggtcgtctac
cactaccccgacggcctggtcgactacgtcaatcacttgaacaagtcgaagtcggtcatc
cacccgtcgatcgtcggcttcgaagccaagggcgatgaccacgaggttgaagtggctatg
cagtggaactccggctacaaggagtccgtgcacacctttgccaacaccatcaacacccat
gagggtggcacccacgaagagggtttccgctctgcactgacgtcgctggtgaacaagtac
gcccgcgatcaccggctgatcaaggacaaggatcccaacgtcaccggcgaggattgccgt
gagggcatcgccgccgtcgttgcggtccgcgtgggcgacccgcagttcgagggccagacg
aagacgaagctgggtaacaccgagatccggtcctttgtccagcgcatggtcaactcccat
gtcggtgactggctggaggccaaccctgcggaggccaaggccatcgtgagcaaggccgtg
tcctcctcgcaggcgcgtattgctgcccgcaaggcgcgcgaattggtgcgccggaagtcc
gcgaccgatcttggtggtctgcccggtaagttggctgattgccgctccaaggatccgagc
gcttccgagctctacatcgtggagggtgactccgcaggtggttccgcaaaggcgggccgt
gactccatgtaccaggcaattttgccgctgcgaggaaagatcctcaacgtggagaaggcc
cgcatggataaggtgctcaagaacgccgaagtccaggccatcatcaccgcgctgggcacc
ggcatccacgaggaatttgatatctcgcgcctgcgctaccacaagatcgtcctcatggct
gacgccgacgtcgatggccagcacatcgcgaccctgttgctgaccctgctgttccgcttc
atgccgcagctgatcgaggaaggccacgtctacctggccaatccgccgctgtacaagctc
aagtggcgttcgggcgagcccggttacgcctactccgacgctgagcgcgaccgggagctg
gaagagggcctggccgctggccgcaagatcaacaccgacgacggaatccagcgctacaag
ggcctgggcgagatgaacccctccgagctgtgggagacgactctcgacccgcacactcgt
ctgctgcgccgcgtggatctgcttgacgcccagcgagccgacgagctcttctccatcctc
atgggtgatgatgtggcggctcgccgttccttcatcacccgcaaggcgaaggacgtccgt
ttcctcgacgtctag
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