Corynebacterium atrinae: CATRI_01520
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Entry
CATRI_01520 CDS
T09346
Symbol
fadD
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
catr
Corynebacterium atrinae
Pathway
catr00061
Fatty acid biosynthesis
catr00071
Fatty acid degradation
catr01100
Metabolic pathways
catr01212
Fatty acid metabolism
catr02024
Quorum sensing
catr04146
Peroxisome
Module
catr_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
catr00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
CATRI_01520 (fadD)
00071 Fatty acid degradation
CATRI_01520 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
CATRI_01520 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
CATRI_01520 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
catr01004
]
CATRI_01520 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
catr04147
]
CATRI_01520 (fadD)
Enzymes [BR:
catr01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
CATRI_01520 (fadD)
Lipid biosynthesis proteins [BR:
catr01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
CATRI_01520 (fadD)
Exosome [BR:
catr04147
]
Exosomal proteins
Exosomal proteins of breast milk
CATRI_01520 (fadD)
Exosomal proteins of breast cancer cells
CATRI_01520 (fadD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
WJY62415
LinkDB
All DBs
Position
complement(303810..305516)
Genome browser
AA seq
568 aa
AA seq
DB search
MSAYEDKAWLKYYDEWTPHSLEYDDTTLLDVYDNNLALNADKSATWFFGRSQTYGELDRQ
VRRAAAGLRAFGVRPGDKVAIILPNCPQHIAAFYAVLKLGATVVEHNPLYTAHELKAPFA
DHGARVAIAWDKAAPTLEKLRGSTALETIISVNMVEAMPKFKQLALSLPLKKIRESRDAL
TAPAPNTVPWEALIGSAIGGDGEDIVSEPSVTKDTTALILYTSGTTGTPKGAQLSHGNLF
ANCLQGKNWVPGLGEEDERMLAALPMFHAYGLTMVGTLAFYVGGEMVLLPAPRVPLIMDV
MKKHTPTWVPGVPTLYEKIVEAAEAEDISITGVRNSFCGAATLPVSTVEKWERLTGGLLV
EGYGLTETSPIIVGNPMNKNRRPGYVGIPFPDTEIRIANPENLDETQPDGTEGEILVKGP
QVFSGYLNQPEATEASFHDGWYRTGDVGVMEEDGFIRLVARIKEVIITGGFNVYPIEVEE
AMREHPDIIDLAVVGRPRADGSEDVVACVTLSEGAALDPEGLKDFARERLTRYKVPRTFY
HFEDLARDQLGKIRRREVQQDLLKLLNR
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcatacgaggacaaggcttggcttaagtattacgacgagtggacgccccactcg
ctggagtacgacgacaccaccctgttggatgtctacgacaacaatctcgcgctcaacgca
gacaagtcagccacctggttcttcggccgcagccagacctacggggagctcgatcgccag
gtccgccgcgctgccgctggcctgcgcgcctttggcgttcgcccgggcgacaaagttgcc
atcatcctcccgaactgcccgcagcacatcgccgcgttctacgcggtgctcaagctcggt
gcgaccgtcgtggagcacaatcctctctacaccgcgcatgagctcaaggcacccttcgcc
gaccatggtgcccgtgtggccatcgcgtgggacaaggctgctccgacgttggagaagctg
cgcggaagcaccgcactggagaccatcatctcggtgaacatggtcgaggcgatgcccaag
ttcaagcagttggccctgagcctgccgctgaagaagatccgcgaatcccgcgatgcgctg
acggcgcctgcccccaacacggtgccgtgggaggcccttattggttcggccatcggcggc
gacggtgaggacatcgtctcagagccgagcgtgaccaaagacaccactgccctcatcctc
tacacctccggcacgacgggcaccccgaagggagcgcagctctcgcacggcaacctcttt
gccaactgcctgcaaggtaagaactgggtgccgggcctcggcgaagaggacgagcggatg
ctcgctgccctgccaatgttccacgcctatggcctcaccatggtgggcaccctcgccttc
tacgtcggcggcgaaatggtcctgctcccggcacccagggtgccgttgatcatggacgtg
atgaagaagcacaccccgacctgggtgccgggtgtgccgacgctctacgagaagatcgtc
gaggccgccgaggccgaggacatcagcatcaccggcgttcgcaattccttctgtggcgcc
gcgaccctgccggtgtccacggtggagaagtgggagcgcctcaccggcggcctgctcgtc
gagggctacggcctcaccgagacgtccccgatcatcgtcggtaacccgatgaacaagaac
cgccgcccgggctatgtgggtatccccttcccggacacggagatccggatcgccaacccc
gagaacctcgacgagactcagcctgatggcaccgagggcgagatcctagtcaagggtccg
caggtcttttccggctacctcaaccagccggaagccaccgaagccagcttccacgatggg
tggtaccgcaccggtgacgtgggagtgatggaagaggacggcttcatccgcctcgttgcc
cgcatcaaggaagtcatcatcaccggtggcttcaacgtctaccccattgaggtggaggag
gccatgcgcgagcaccccgacattatcgatctggcggtcgtcggtcgtccccgcgccgat
ggctccgaggatgtcgtcgcttgtgtcaccctcagcgaaggtgccgccctggacccggag
ggcctcaaggacttcgcccgcgagcgcctcacgcgctacaaggtcccgcgcaccttctat
cacttcgaggatctggcccgcgaccagctgggcaagattcgccgccgcgaggtccagcag
gatctgctgaagctgctgaaccgctaa
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