Corynebacterium atrinae: CATRI_03005
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Entry
CATRI_03005 CDS
T09346
Symbol
gabD2
Name
(GenBank) Succinate-semialdehyde dehydrogenase [NADP(+)] GabD
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
catr
Corynebacterium atrinae
Pathway
catr00250
Alanine, aspartate and glutamate metabolism
catr00310
Lysine degradation
catr00350
Tyrosine metabolism
catr00650
Butanoate metabolism
catr00760
Nicotinate and nicotinamide metabolism
catr01100
Metabolic pathways
catr01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
catr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
CATRI_03005 (gabD2)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
CATRI_03005 (gabD2)
00310 Lysine degradation
CATRI_03005 (gabD2)
00350 Tyrosine metabolism
CATRI_03005 (gabD2)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
CATRI_03005 (gabD2)
Enzymes [BR:
catr01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
CATRI_03005 (gabD2)
1.2.1.20 glutarate-semialdehyde dehydrogenase
CATRI_03005 (gabD2)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
CATRI_03005 (gabD2)
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Motif
Pfam:
Aldedh
DUF3102
Motif
Other DBs
NCBI-ProteinID:
WJY62706
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Position
complement(594314..595786)
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AA seq
490 aa
AA seq
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MNTTIDALLAKVPTGLLIGGQWRDSSDGSTFAVENPATGEVLLTLASATSDDARAALDAA
CAVQDEWARIAPRERAELLRRGFDLVQERKEEFATLMTLEMGKPLAEARGEVNYGTEYLR
WFSEEAVRDYGRTFPAPEGTLQMLTRRKPVGPCLLITPWNFPLAMATRKIAPAIAAGCTM
VLKPAKLTPLTSQYFAQTMLDAGLPAGVLNVVSGSSASAISEPIMADRRLRKISFTGSTA
VGKSLLKAAADNVLRTSMELGGNAPFLVFEDADIDQAVEGAMGAKMRNIGEACTAANRFI
VHESVAEEFSTKFARRISELTLGNGLDEGVTCGPLIDESARESITQLVDDAVAQGARALT
GGTPGQGAGYFYTPTVLIDVPREARVAQEEIFGPVAPIITFREEKEAIAIANDTEYGLAS
YVYTESVDRLWRLSDGLEFGLMGANVGVISNAAAPFGGVKQSGMGREGGAEGLAEYTTLQ
YIGVRNPYGS
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgaacaccaccatcgatgccctcctcgcgaaagttcctaccggcctgctgatcggcggg
cagtggcgagactcctctgacggttctaccttcgcggttgaaaatccggccaccggcgag
gtgctgttgacgttggcgtccgcgacgtcggacgatgcccgcgccgcgctggatgctgcg
tgtgccgtccaggacgagtgggcacgcatcgcaccgcgtgagcgcgctgagctgctgcgc
cgcggtttcgatttggtccaggagcgcaaggaggagttcgcgaccctcatgacgttggag
atgggcaagcccctcgcggaggcgcgcggcgaagtgaactacggcaccgaatacctgcgc
tggttctccgaggaggcggtgcgcgactatggccgcacattccctgccccggaaggtacg
ttgcagatgctcacgcgccgcaagccagtgggcccgtgcttgctcattactccgtggaac
ttcccgctggcgatggcgacccgcaagattgctccggcgatcgccgcggggtgcacgatg
gtgctcaaacccgcgaagctgacgccgctgacctcgcagtacttcgcccagaccatgctt
gatgcgggtcttccggcgggagtgctcaatgtcgtctcgggttcttctgcctcggcgatt
tccgagcccattatggccgaccgtcgcctccgcaagatctctttcaccggctccaccgcc
gtgggcaagtcgctcctcaaggccgccgctgataacgtcctgcgcacgtccatggagctg
ggcggtaacgcccccttcctcgtattcgaggatgcggacattgatcaggccgttgagggt
gccatgggcgccaaaatgcgcaacattggtgaggcttgcacggccgcgaatcggtttatc
gtgcacgagtcagtcgcggaggagttctccaccaagttcgcccgccggatcagcgaactc
accctcggcaatgggctcgacgagggcgtgacctgcggtcctctcatcgatgagagtgcc
cgcgagtccatcacccagcttgtcgacgacgccgtggcccaaggcgcgcgcgccctcacc
ggtggtactcccggccagggggccgggtacttctacaccccaacggtgcttatcgacgtc
ccccgcgaagcccgagtcgcccaagaggaaatctttggccccgtcgctcccatcattacc
ttccgcgaggaaaaggaggccatcgcgattgccaacgacaccgagtacggcctcgcttcg
tacgtctacaccgaatccgtggaccgtttgtggcggctgtccgacggcctcgagttcggg
ctcatgggagccaacgtcggggtcatctccaacgccgccgcccccttcggcggagtcaag
cagtccggaatgggtcgcgagggaggcgccgagggactggccgagtacaccactctccag
tacatcggcgtgcgcaacccctacggctcttaa
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