Corynebacterium atrinae: CATRI_03120
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Entry
CATRI_03120 CDS
T09346
Symbol
uvrD1
Name
(GenBank) ATP-dependent DNA helicase UvrD2
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
catr
Corynebacterium atrinae
Pathway
catr03420
Nucleotide excision repair
catr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
catr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CATRI_03120 (uvrD1)
03430 Mismatch repair
CATRI_03120 (uvrD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
catr03400
]
CATRI_03120 (uvrD1)
Enzymes [BR:
catr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CATRI_03120 (uvrD1)
DNA repair and recombination proteins [BR:
catr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CATRI_03120 (uvrD1)
MMR (mismatch excision repair)
Other MMR factors
CATRI_03120 (uvrD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
HHH
Viral_helicase1
DUF6011
HHH_5
ORC-CDC6-like
Motif
Other DBs
NCBI-ProteinID:
WJY62729
LinkDB
All DBs
Position
618433..620478
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AA seq
681 aa
AA seq
DB search
MIDLHELDDDQRVAATAPRGPVCILAGAGTGKTRTITYRIAHLIDQGFVSPNRVLAVTFT
SRAAGEMRHRLGLMGIGGVQARTFHAAARRQLSYFWPQVAGSLPWKLLDNKFPLVGRAAR
SVGVESSKENVRDLLSEIEWAKATLISADQYVESTANSDRTPPVPAEKVAEVYRRYEASK
LTEDGILLDFDDLLLHVAAALENAPGVAEEFREQYRTFVVDEYQDVTPLQQRVLQAWLGE
RDDLTVVGDANQTIYSFTGATPNYLLDFSRTYDNATVVKLQRDYRSTPQVTGMANTVISK
ATGRVAGTRLELVGMRAPGPQPTFNAYDDEPTEAREVAGQILSLLNQGVPASEIAVLYRI
NAQSQAFEQALADAGIVYQVRGGEGFFNRNEVRQAISELVRATQRTDLPDDPVAVSRAAL
APLGLTPTEPEGAQARERWQSLHALVDLIEEIVRATPDLDLTGVLGALRQRAEAKHPPTV
EGVTLASLHAAKGLEWDAVFLVGLVENTLPISHAIKAGEHQVEEERRLFYVGITRAREHL
HLSWALARQEGGRKSRSRTRFLDGIVPELEIEKVPARTVRPKRCRVCGQPLATPAEKVLG
RHEGCPSGADEAVFETLRAWRSEVARENNVPAYLIFSDATLMAVAEAAPQDEPELLEVPG
IGPVKAERFGADLLALLDSFR
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgatcgacctgcacgaacttgatgatgaccaacgggtcgccgccaccgccccccgcggc
cccgtgtgcatcctcgctggtgccgggaccggaaaaacccgtactattacctaccgcatt
gcacacctcatcgaccagggatttgtcagccccaaccgcgtgctagcggtgacgtttact
tcccgggcggccggggagatgcgtcatcgccttggcctcatgggtatcggcggggtccag
gcgcgcaccttccacgccgccgcccgccgacaattgtcctacttctggccgcaagtcgcc
ggctccctgccctggaagctactggataacaagtttcccctggtgggccgggccgcgcgc
tccgtcggcgtggaatcctcgaaggagaacgtccgcgacctcctcagcgagatcgagtgg
gcgaaagccaccctcatcagtgcggaccagtacgtcgaatccacggctaactccgatcgc
accccgcccgtcccggcggagaaagttgccgaggtctaccggcgctacgaggcatccaag
ttaaccgaagacggcatcctcctcgacttcgatgacctgctcctccacgtcgccgccgcc
ttggaaaacgcccccggcgtggccgaggaattccgtgagcagtatcgcaccttcgtcgtc
gacgagtaccaggacgtcacacccttgcaacaacgggtgctccaggcctggttgggggag
cgcgatgacctcaccgtcgtcggggacgccaaccagaccatctattccttcaccggcgcg
acgcccaactacctgttggacttctcgcggacctatgacaacgcgaccgtcgtcaagctg
cagcgggactaccgctccactccgcaggtgacgggaatggctaacactgtcatttcgaag
gcgaccggacgggtggctggcacgcgcctggaattggtcggcatgcgggccccggggccg
cagcccaccttcaacgcctacgacgacgaaccgaccgaggcccgcgaggtcgccgggcag
atcctcagcctgctcaaccagggcgtgcccgccagcgaaatcgccgttctctaccgcatc
aacgcccaatcgcaggcgtttgagcaggcgctcgccgacgccggcattgtctaccaagtc
cgcggcggcgaaggttttttcaaccggaacgaggttcgccaggccatcagcgagctcgtc
cgcgctacccaacgcaccgatctccccgacgatcccgtcgccgtctcccgcgcggcactg
gcacccctggggctcacgccgacggaaccggaaggtgcgcaggcccgggagcgctggcag
tcgctgcacgcgctcgtcgacctcatcgaggagatcgtccgagcgaccccggacctcgac
ctcaccggggtgctcggggcgttacgccagcgcgcggaggccaagcacccgccgaccgtc
gagggcgtcaccctggccagcttgcacgcggcgaagggcttggaatgggacgccgtattc
ctcgtcggactcgtcgaaaacacgctgcccattagccacgccatcaaggccggcgagcac
caggtcgaggaggaacgtcgcctgttctacgtcggcattacccgcgcgcgggagcatttg
cacctgtcctgggcgctggcgcggcaagaaggcggccgcaaatcccgcagccgcacccgc
ttccttgacggaatcgtgccggagctagagatcgagaaggtccccgcgcgcaccgttcgc
cccaagcgctgccgggtgtgcggacagcccctggcaacacccgcggagaaggtgctgggc
cgacacgaaggctgcccctcaggcgcggacgaagccgtctttgagacgctgcgcgcctgg
cgctccgaagtcgcccgcgagaacaacgtccccgcctacctgattttctccgatgccacc
ctcatggcggtcgccgaagcagcaccgcaggacgaacccgaactgctcgaggtccccggc
atcggccccgtcaaagccgagcgcttcggcgcggacctgctcgccctgctcgattccttc
cgctag
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