Corynebacterium atrinae: CATRI_03505
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Entry
CATRI_03505 CDS
T09346
Symbol
uvrD2
Name
(GenBank) ATP-dependent DNA helicase UvrD1
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
catr
Corynebacterium atrinae
Pathway
catr03420
Nucleotide excision repair
catr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
catr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CATRI_03505 (uvrD2)
03430 Mismatch repair
CATRI_03505 (uvrD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
catr03400
]
CATRI_03505 (uvrD2)
Enzymes [BR:
catr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CATRI_03505 (uvrD2)
DNA repair and recombination proteins [BR:
catr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CATRI_03505 (uvrD2)
MMR (mismatch excision repair)
Other MMR factors
CATRI_03505 (uvrD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_11
ResIII
Motif
Other DBs
NCBI-ProteinID:
WJY62799
LinkDB
All DBs
Position
695689..698052
Genome browser
AA seq
787 aa
AA seq
DB search
MESPFTPSPAPSPQPSSQDLTLGLNEQQRAAVEHAGSPLLIVAGAGSGKTAVLTRRIAYL
MSQRGVSPFDILAITFTNKAAAEMKERVAALVGPVAERMWVSTFHSVCVRILRQQAQLVP
GLNTNFTIYDSDDSRRLLSMIAKDHSLDLKRFTARVLASAISNLKNELIGPEEAIADAEA
TRNPFEITVAQVYKDYQRRLRSANAVDFDDLIGEVVRIFTEHPAVTDYYRRRFRHVLIDE
YQDTNHAQYMLIARLVGDGPDAPELCVVGDSDQSIYAFRGATIRNIEEFERDYPQARTIL
LEQNYRSTQTILNAANSVISRNDGRREKKLWTALGTGQEIIGYVADNEHDEARFVAGEID
AIVDKGKTYADVAVMYRTNNASRALEDIFIRSGIPYKVVGGTRFYERREIRDLVAYLRVL
DNPDDTVSLRRIINTPRRGIGDRAQAFIALHAENNNQSFGQALIDAAGDKVDFLGARGRN
AVAKFNEMMDAVRAEMPSMTNEVTGMPDLGELISRVLDITGYRGELEASNDPQDGARLDN
LNELVSVAREFSSEAANQVAYAEMDGDEFELEEGEAQPGSLQAFLEKVSLVADADQIPDN
EQGVVTLMTLHTAKGLEFPVVFLTGWEDGQFPHLRALGDPKELAEERRLAYVGITRAREQ
LYLTRAMLRSSWGNSVTNPPSRFLAEIPLELIDWRREEPEHSFSDAWGMSSGYQRPSVPK
KKPSLPKASRNNNLQLAVGDRVNHDKYGLGTVIAADGSGARATVTIDFGSSGKVRLMLIG
GVPMEKL
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atggaatcgccgtttactcccagccctgctcccagccctcagccttcttcccaggatctc
accctcggtctcaatgagcagcagcgcgctgccgttgagcacgcgggctccccgcttctc
atcgtcgccggtgctggttctgggaagaccgccgtccttactcggcgaatcgcctatttg
atgagccagcgaggggtgtctcccttcgatatcttggctattaccttcaccaacaaggct
gcggcggagatgaaggagcgcgtcgccgccctcgtgggcccagtcgcggagcggatgtgg
gtgtccacgttccactcggtgtgcgtgcgtattttgcggcagcaagcgcagctggtgccg
gggttgaacaccaacttcaccatctatgattcggatgattcgcgccggctgctcagcatg
atcgctaaggatcattcgctggacctcaagcggtttacggcgcgagttctggcgagcgct
atttccaatttgaagaatgagctgattgggccggaggaagccatcgcggatgcggaggcg
actcgcaatcctttcgagatcaccgtcgcgcaggtgtacaaggattatcagcggcggctg
cggtcggccaatgccgtggacttcgatgacctgatcggtgaggtcgtgcggatcttcacc
gagcatccggcggtgacggattactaccggcgtcgcttccgccacgtcctcatcgatgag
taccaggacaccaaccacgcgcagtacatgctcatcgcccgtttggtcggggatgggccg
gatgccccggaattgtgtgtcgtgggtgattcggatcagtcgatctacgctttccgtggg
gccacgatccgcaatatcgaggagttcgagcgagactatccgcaggcacgcacgattctg
ttggagcagaactaccgctcgactcagacgattctcaatgccgcgaactcggtcatttcc
cgcaatgatggccgccgggagaagaagctgtggacggcgctggggaccggccaggagatc
atcggctacgtggcggacaacgaacacgacgaggcgcggtttgttgctggggagattgac
gcgatcgtcgataagggaaagacctatgccgatgtggcggtgatgtaccgcacgaacaat
gcttcccgcgcactggaggacatttttatccgctccggcattccatacaaggtggtcggc
ggcacgcgcttttatgagcgccgtgagatccgtgatctggtcgcctacctgcgggtcctg
gacaatccggatgacacggtgagcctgcggcgcatcatcaataccccccgccgtggcatc
ggcgaccgggcgcaggccttcatcgcgttgcacgcggagaacaacaatcagtccttcgga
caggcgcttatcgacgccgcgggggacaaggtggacttcctcggcgcgcgcggacgcaat
gcggtagcaaagttcaacgagatgatggacgccgtgcgcgcagagatgccgtcgatgacc
aacgaggtgacggggatgccggacctcggcgagttgatcagccgagttctcgacatcacg
ggctatcgcggtgaactggaagcgagcaacgacccgcaagatggggctcgtttggataac
ctcaacgagctcgtgtccgtggctcgggagttttcctcagaggcggcgaaccaagttgcc
tacgccgaaatggatggggatgaattcgagctggaggaaggtgaggcgcagccgggctca
ctccaagccttcctggaaaaggtctcgttggtcgccgatgccgaccagatccccgacaat
gagcagggcgtggtcacgctcatgaccctgcacactgccaagggcctggagttccccgtc
gtgttcctcactggctgggaggacggccaattcccgcacctgcgtgccctgggagatccc
aaggagctggcagaagaacggcgcctggcctacgtgggcattacccgcgcccgggagcag
ctctacctcacccgagccatgctgcgatcttcctggggcaactcggtgaccaacccaccg
agtcgcttcctggcagagattccgctggagctcattgattggcgccgggaggaaccggag
cattccttctccgatgcgtgggggatgagctccggctatcagcggccgagcgtgccgaaa
aagaaaccgagcctgcccaaggcctcgcgcaataacaacctgcaactggcagtgggggat
cgcgttaaccacgataaatatggcctgggaacggtcatcgccgccgacggctcgggtgcc
cgtgccacggtgaccatcgatttcgggtcatccggcaaggtgcgcctcatgctcatcggc
ggcgtgcccatggaaaagctctaa
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