Corynebacterium atrinae: CATRI_03705
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Entry
CATRI_03705 CDS
T09346
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
catr
Corynebacterium atrinae
Pathway
catr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
catr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CATRI_03705 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
catr03019
]
CATRI_03705 (recQ)
03400 DNA repair and recombination proteins [BR:
catr03400
]
CATRI_03705 (recQ)
Enzymes [BR:
catr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CATRI_03705 (recQ)
Messenger RNA biogenesis [BR:
catr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CATRI_03705 (recQ)
DNA repair and recombination proteins [BR:
catr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CATRI_03705 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
RecQ_Zn_bind
HTH_Cmi2_C
HEM4
HVO_A0261_N
Motif
Other DBs
NCBI-ProteinID:
WJY62839
LinkDB
All DBs
Position
733840..735906
Genome browser
AA seq
688 aa
AA seq
DB search
MELTRGTANELLVGIAGQGAHLRDDQWTAIQALVEQRRRMLVVQRTGWGKSAVYFIAAKL
LREAGRGPTLIISPLLALMRNQVEAAGKAGIVAATLNSANMTEWEEIQAQVVSGEVDVLL
ISPERLNNPGFREEVLPHIAHTVGMVVVDEAHCISDWGHDFRPDYRRIRTLLTELPEGVP
VLATTATANDRVVADVQAQLGAETGLLRGGLDRESLHLSVVQLDDSTQRPAWLATHLSEL
EGSGVIYCLTVAAAEDLAEALDAAGWNVAAYTGRTEAGERERLEQALIANELKALVATSA
LGMGFDKPDLGFVVHVGAPSSPVSYYQQIGRAGRGTDRADVILLPGAEDRDIWRYFASVS
FPEEQTVQQLLSVLGDEPQSTIRLESQVDLSRSRLDQVLKVLDVDGAVNRVRGGWVSTGQ
PWTYDAARYQGLAAARTAEQNAMMEYQRTSGCRLLFLRRQLDDVTATSNCGRCDNCTGQA
WDTGVDASVASRVSTRLTAPGVRLTQRKQWPTGISVKGKIHGVEPGRALGRLNDIARGPA
LRELLGDKAWRPTSPWQEDTWLPRIVAVLAEWDWNQRPTSVIALGTVDPEATAQVTALAE
AVAGVGRMAFVGTLPVRPGTGEVTAQNSAYRVKGLLEHWDFTGLPTVDGPILLVTDLVDT
GWSVTVAGEALARITGQVVLPLALASRG
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggagcttactcggggtacagcaaacgaactgctcgtcggcatcgcggggcagggcgcc
cacttgcgcgatgatcagtggacggccatccaagcactcgtcgagcagcggcggcggatg
ctcgtggtgcaacgaacgggctggggcaagtcggcggtgtacttcatcgcggcgaaattg
ctgcgggaggcggggaggggtccaacgctcatcatctccccgctgttggcgctcatgcgc
aaccaggtggaggcggcaggaaaagcggggatcgtcgccgccaccctcaacagcgcgaac
atgactgaatgggaggagatccaagcccaggtggtgtcgggtgaggtcgatgtcctgctt
atctcgccggagcggctgaacaaccccggcttccgcgaggaggttctgccccacatcgcc
cacaccgtgggcatggtagtcgtggatgaggcgcactgtatctcggactgggggcatgat
ttccgcccggattatcggcgcatccgcacgctcttgaccgagctcccggaaggagtgccg
gtgttagccacgacggcgacggccaacgaccgcgtggtcgccgatgtccaggcccagctg
ggagcggagaccggtctgctgcggggcgggttggacagagagtcgctgcacttatctgtg
gtccagctggatgattcgacccaacgcccggcctggctggccacgcacctgagcgaactc
gaaggctccggcgtcatctattgcctgacggtcgccgcggctgaagacctggcggaagct
ctcgacgccgctggctggaacgtcgccgcgtacaccggccgaacagaggcgggggagcgg
gagcgcttggagcaggcgctgatagccaatgagctcaaggcgttggtggccacgtcggcg
ctgggcatggggtttgataaaccggatctgggattcgtcgtccacgtcggggcaccgagc
tccccggtgtcctactaccagcagattggccgcgccggccgaggcacggaccgagccgac
gtcatcctcctccccggtgcggaagaccgcgacatctggcgctactttgcctccgtgtca
ttccccgaagagcagacggttcagcagctcctctcggtactaggggatgagccgcagtcg
acgatccgactggaaagccaggtagatctcagtcgttctcgcctcgaccaagtgctaaag
gtcctcgacgtcgatggcgcggtcaaccgggtccggggcggttgggtgtccaccggccaa
ccgtggacctacgatgccgcacgctaccaaggtctggctgccgcccgcactgccgagcaa
aacgccatgatggaataccagcgcacttctggctgtcgcttgctcttcctgcgccgccaa
ctggatgacgtcactgcgactagtaactgcggccgctgtgacaactgcacgggccaggcc
tgggacacgggcgtcgatgcctccgtggctagccgggtgtccacccgactcaccgcgccg
ggagtgcgactgacccagcgcaaacaatggccgaccggcatcagcgtcaagggcaagatt
cacggcgtcgagcccggtcgagcactcggtcgcctcaatgacatcgctcgtggcccggca
ttgagagagttgctcggcgacaaagcgtggcggccgacgtcaccgtggcaagaagacacg
tggttgccccgaatcgttgctgtgttggctgaatgggattggaatcaacggcccaccagc
gtcattgcgcttggcacagtcgatccggaggccacagctcaggtgacggctctggcggaa
gcggtcgccggggtgggccggatggccttcgtgggtacgctgcccgtgcgccccggcacg
ggagaagtcaccgcgcagaactctgcctatcgggtgaaaggcctcctggagcactgggac
ttcacgggcctacccaccgtggatggcccgatcctgctggtcacggacctggtggacacc
gggtggtccgtgacggtggcgggcgaagccctcgccagaatcaccgggcaggtggtgcta
cctctcgccctggccagccggggttag
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