Corynebacterium atrinae: CATRI_05740
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Entry
CATRI_05740 CDS
T09346
Symbol
ddl
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
catr
Corynebacterium atrinae
Pathway
catr00470
D-Amino acid metabolism
catr00550
Peptidoglycan biosynthesis
catr01100
Metabolic pathways
catr01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
catr00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CATRI_05740 (ddl)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CATRI_05740 (ddl)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
CATRI_05740 (ddl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
catr01011
]
CATRI_05740 (ddl)
Enzymes [BR:
catr01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
CATRI_05740 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:
catr01011
]
Precursor biosynthesis
Amino acid ligase
CATRI_05740 (ddl)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
ATP-grasp_3
CPSase_L_D2
ATP-grasp_4
RimK
GARS_A
Motif
Other DBs
NCBI-ProteinID:
WJY63237
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All DBs
Position
1149757..1150833
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AA seq
358 aa
AA seq
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MEKPQRIRVGVVYGGRSPEHSVSCVSAGAIMTHLDPEAFDVVAIGITPEGKWTAGESDPS
ALVIRDGKLPTVGDQGPELALSLNPVTRGQIRNAETGELHATVDVIFPVLHGPFGEDGTI
QGLLEMSGIPYVGTGVLSSACGMDKEYMKKLMAAVGLPITPEVILRDRTELTAEEKALLG
LPVFVKPARGGSSIGVSKVKDWADLPAAVALALESDNKVIVEAEIIGAEVEVGVLERPDG
SVVASVPAMLNGTGDSDEGFYGFDTKYLDDVVTATIPAPFDEGMTSALQNMAIDTFQALN
CEGLARVDFFVTDQGPVINEINTMPGFTPISMYPQVFAASGVAYEDLLRTLVEQALAR
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagccacaacgaattcgcgtcggggtcgtctatggcggccgcagtccagagcat
tccgtttcctgcgtgtcggcaggggcgatcatgacacacctggaccccgaggcgtttgac
gtcgtggcaatcggtattaccccagagggcaagtggacggcgggggagtccgatcccagc
gccctggtcatccgggatggcaagctccccaccgtgggcgatcaggggcctgagctggcg
ctctccctcaacccagtcacacgtgggcagatccgcaacgccgagaccggcgagcttcat
gccaccgtggatgtcatcttccccgtgctccacggccccttcggtgaggacggcaccatt
caggggctgctcgagatgtcgggcattccttacgtgggtaccggcgtgctctcctccgcg
tgcggcatggacaaggagtacatgaagaaactcatggcggcggtcggattgccgatcacc
cctgaggtcattttgcgggatcgcacggagctcactgccgaggagaaggcattgctcggg
ttgccggtgttcgtgaaacctgcccgcggtggttcatcgattggtgtgtccaaggtgaag
gactgggctgatcttccggcagctgttgccctggctctggagtccgataacaaggtcatc
gttgaggccgagattatcggcgctgaggtagaggtcggtgtgctggagcgcccggatggc
agcgtcgtcgcctcagtcccggccatgctcaacggcaccggggactcggacgagggcttc
tacggttttgacaccaagtatcttgatgacgtggttacggctacgatcccggcccccttc
gacgagggcatgacctcagcgctgcaaaacatggccatcgatacgttccaggccctcaac
tgcgagggcctggcccgggtggacttttttgtcaccgaccaaggtccggtgatcaacgag
atcaacaccatgcccggcttcacacccatctcgatgtacccgcaggtcttcgcggctagc
ggcgtcgcttatgaggacttgttgcgcaccctcgtcgagcaggcgctagcccgctaa
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