Corynebacterium atrinae: CATRI_05835
Help
Entry
CATRI_05835 CDS
T09346
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
catr
Corynebacterium atrinae
Pathway
catr03030
DNA replication
catr03410
Base excision repair
catr03420
Nucleotide excision repair
catr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
catr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CATRI_05835 (polA)
03410 Base excision repair
CATRI_05835 (polA)
03420 Nucleotide excision repair
CATRI_05835 (polA)
03440 Homologous recombination
CATRI_05835 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
catr03032
]
CATRI_05835 (polA)
03400 DNA repair and recombination proteins [BR:
catr03400
]
CATRI_05835 (polA)
Enzymes [BR:
catr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CATRI_05835 (polA)
DNA replication proteins [BR:
catr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CATRI_05835 (polA)
DNA repair and recombination proteins [BR:
catr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CATRI_05835 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CATRI_05835 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_lambd_f
HHH_2
HHH_5
Motif
Other DBs
NCBI-ProteinID:
WJY63255
LinkDB
All DBs
Position
1165979..1168624
Genome browser
AA seq
881 aa
AA seq
DB search
MNENNRLLLIDGHSMAFRAFYALPAENFSTTGGQHTNAIYGFLSMLANILSEEKPDKVAV
AFDVGRKTFRTDMFPEYKAQREASPEEFKGQVGILEGLLGTLGITTLSMENFEADDILAT
LTTAAKGLDYETLIVTGDRDYLQLVDPKTTVLYPMRGVSTIHTFTPEAVEEKYGLTPEQY
PDFAALRGDPSDNLPNIPGVGEKTATKWIQQYGTLDNLLEHADEIKGKAGENLRERIEQV
KLNRKLTHMLTDMELPVTPDQLEFQPVDVAAVAEQFDALQFGTNLRERVLAVVRTDGSAV
EESVELADVVVDDAELADWLAERSGQGLALFAVGTPSPGQGDVSGFAIVDKQRHAVSVEA
VDLSPRDEKALAGWLASEDPKYLHESKAAFHMFAGRGMVLNGVTQDTAIAAYLLRPGQRT
YDLKDVYQRHLQRQLVEPDGQLSLMGDTSLVDSAVAVLELSEKLTEQLKEINAFELYYDM
ELPLARILAEMEAVGIAVDVEILEDQLGSFIDMVAEEEIAARELADDPGLNLSSPKQLQV
VLFDKLGLPKTKKTKTGYSTAAKEIEGLAEKHPHPFLDHLLAHREYQKMKTTLEGLIKTV
QPDGRIRTTFNQTVASTGRLSSTEPNLQNIPVRTPAGRKIRSAFVVGKGFETLLTADYSQ
IEMRVMAHLSQDPGLIEAYREGEDLHNFVGSKVFEVPIDEVTPELRRRVKAMSYGLVYGL
SAFGLSQQLNIPAGEAKSIMESYFERFGGVQRYLAEVVDQARKDGYTSTLFGRRRYLPEL
TSDNRVARENAERAALNAPIQGTAADIIKVAMIRVDRSLRAAGVTSRVLLQVHDELVVEI
APGELEQVREIVEHEMDQAITLRVPLEVSAGHGANWDEAAH
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgagaacaatcgccttttgctcattgatggtcactctatggccttccgcgctttt
tatgccctgccggcagagaatttctctacgacgggcgggcagcacacgaacgctatctat
gggttcttgtccatgttggccaatattttgtcggaggagaagcctgacaaggtggcggtg
gcgtttgacgtggggcggaagacgtttcgcacggatatgttcccggagtacaaggcccag
cgggaggcgtctccggaggaattcaagggccaggtcgggatcctggaggggctgctgggg
accttgggtatcacgacgttgagtatggaaaattttgaggcagatgacatcctcgccacg
ttgaccacagcggcgaaggggcttgattatgagacgctcatcgtcaccggtgatcgtgat
tatctgcagttggtggacccgaagacgacggtgctgtatccgatgcgcggggtctccacg
atccatacgtttacgccggaggcggtagaggagaagtacgggctgacgccggagcagtat
ccggatttcgcggcgttgcggggggacccgtcggacaacttgccgaatatcccgggggtg
ggggagaagaccgccacgaagtggattcagcagtacggaaccttggacaatctcctcgag
catgccgatgagattaagggcaaggcgggggagaatctccgggagcgcattgaacaggtc
aaactcaatcggaagctcacgcacatgctcacggacatggagctgccggtcactcctgat
cagttggagtttcagccggtggatgtcgcggcggtggccgagcagtttgatgccctacag
tttggtacgaatctccgcgagcgagtcctagcagtcgtccgcacggatggttcggcggtg
gaggagtcggtagagcttgccgacgtcgtcgtcgacgacgccgagctcgccgactggttg
gcggagcgcagcgggcagggcttggcgttgtttgcggtggggacgcccagcccggggcag
ggtgacgtgtcgggtttcgcgatcgtcgataagcaaaggcacgcggtgagcgtggaagcg
gttgacctgtccccgcgcgatgagaaggcgctggccgggtggttggcgtcggaggatccg
aagtacctgcatgagtcgaaggcggcgtttcatatgtttgctggccgaggcatggtgctc
aatggggtgacgcaggatacggcgattgcggcgtatttgctgcggccggggcagcggaca
tatgacctcaaggatgtgtaccagcgtcatttgcagcgccagctcgtggagcccgatggg
cagctgtcactgatgggggatacctccctggtcgattccgcggttgccgtgttggagctg
agcgagaagctcaccgagcagctcaaggagatcaatgccttcgagctgtactacgacatg
gagttgccgctggcgcggatcctcgccgagatggaggccgtgggtattgccgtcgatgtg
gagatcttggaggatcagctgggctcgttcattgacatggtggcggaggaggagatcgcg
gcccgcgaattggctgatgatccgggcttgaatctctcgagcccaaagcagctgcaggtc
gtgctctttgacaagttgggtctgcccaaaaccaagaagacgaagaccgggtattccacc
gcggcgaaggagattgagggcctggcggagaagcatccgcatcccttcctggatcacctg
ctcgcacaccgtgagtatcagaagatgaagaccacgctggaggggctgatcaagacagtt
cagcctgatgggcgcatccgcacgaccttcaatcagacggtggcttcgacgggtcggctg
agctcgaccgagccgaatttgcagaatattcccgtgcgcactccggctggtcgcaagatc
cgttcggcgttcgtggtgggcaagggcttcgagacgctcctgacggcggactattcccag
attgagatgcgcgtcatggcgcacctgtcgcaggatccggggttgatcgaggcgtatcgc
gaaggcgaggacctgcacaactttgttggttccaaggtcttcgaggttccgattgatgag
gtcacgccggagttgcgtcgccgcgtcaaggcgatgtcttacggcctcgtctacggcctg
tcggcgttcggcctctcccagcagctcaatattcccgccggtgaggcgaagtcgatcatg
gagagctacttcgagcgtttcggcggcgtccagcgctacctcgctgaggtcgtcgatcag
gcccgcaaggacggctacacctcgacgctgtttgggcggcgccgttacctgccggagctg
acgtcggataaccgcgtggcgcgggagaatgcggagcgcgcggcgttgaatgcgccgatt
cagggcacggccgcggacatcattaaggtcgcgatgatccgcgtcgatcgctcactgcgc
gcggcgggcgtcacctcccgcgtcctcctccaggtgcacgacgaattggtcgtcgagatt
gccccgggcgagttggagcaggtccgcgagatcgtggagcacgagatggatcaggcgatt
accctgcgcgtgcccttggaggtctccgcggggcacggtgctaactgggacgaggctgct
cactag
DBGET
integrated database retrieval system
