Corynebacterium atrinae: CATRI_07495
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Entry
CATRI_07495 CDS
T09346
Symbol
rnd
Name
(GenBank) Ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
catr
Corynebacterium atrinae
Brite
KEGG Orthology (KO) [BR:
catr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
catr03016
]
CATRI_07495 (rnd)
Enzymes [BR:
catr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
CATRI_07495 (rnd)
Transfer RNA biogenesis [BR:
catr03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CATRI_07495 (rnd)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exoN
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
WJY63571
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Position
1524055..1525263
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AA seq
402 aa
AA seq
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MTFELSAPREGIPAVLDTVEGFMSAATRLQGGTGPIAIDTERASGFRFDDRAFLIQVRRR
GVGTLLFAPEGVRDAFTSALAPVLNGQEWVIHAAPSDLPSLAWLGLYPGTLFDTELAGRL
AGFDHVNLAAMISDVFDQQLAKGHGAEDWSKVPLPENWLSYAALDVELLLELAEAMAEIL
DQQGKLQWAEEEFEHIRTGHADIVEPATLTWRDTKGVSTLSRPEQFAVARELWLARQSIA
VDNDRAVSKVLPNKVLVEIARALPDSVADLARVKGFPRKRQSSTSFWFQIIRRARASQPS
TWPKRERSSRGAPHHSTWAGYHPEAWEALTHFRADVEEVSLDLGIPVENLLQPSLAREAI
WAATETREIGTENDLVGWLHAHGAREWQVELVAPLLVDALFR
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgacgtttgagttgtctgccccgcgcgaaggtattccggcagtgctcgatacggtagag
ggcttcatgtccgctgcgacgaggctgcaagggggcacgggtccgattgcgatcgatacc
gaacgcgcctccggctttcgtttcgacgaccgcgccttcctcatccaagtgcgcaggcgc
ggcgtcggcacgctgcttttcgccccggagggcgtgcgcgatgcgttcacttcggcgctt
gctccggtgctaaatgggcaggagtgggtgattcatgcagctccgtcagatctaccgagc
ctcgcgtggctgggcctatacccggggacattgtttgatacggagctagcgggaaggctc
gccggcttcgatcacgttaatctcgcggcgatgatttcggatgtttttgatcaacagctg
gccaaggggcacggtgccgaggattggtcgaaagtgccgttgccggagaactggctgtct
tatgccgcgttagatgtcgagctgctcctcgaattggcggaggcgatggcggagattctc
gatcagcagggcaagctgcaatgggccgaggaggaattcgagcacattcgcaccggccat
gccgacattgttgagccagcgacattgacgtggcgcgacacgaagggcgtatccacgctt
tcccgcccggaacagttcgctgtcgcgcgggaattgtggttggctcggcagtcgattgcg
gtggataatgatcgcgcggtgtcgaaggtgctgccgaacaaagtgctggtggagatcgcc
cgcgctctccccgattctgttgcggacctggctcgggtaaagggtttcccgcgcaagcgc
caatcctcgaccagcttttggtttcagatcatccgccgcgctcgtgcctctcagcccagc
acgtggccgaagcgggagcgcagctcgcggggcgcgccgcaccacagcacgtgggccggc
taccacccggaggcatgggaggcgttgacgcacttccgcgcggacgtggaggaagtctcc
ctcgatctgggaatccccgtggagaatctcctgcagccttcgctggcacgcgaggcgatc
tgggcggctaccgaaacccgggagatcggcacggagaatgacctcgtggggtggcttcac
gctcacggtgcccgcgagtggcaggtggagttggtcgctcccctgctggtcgatgctcta
ttccgttag
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