Corynebacterium atrinae: CATRI_07540
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Entry
CATRI_07540 CDS
T09346
Symbol
sigA
Name
(GenBank) RNA polymerase sigma factor SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
catr
Corynebacterium atrinae
Brite
KEGG Orthology (KO) [BR:
catr00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CATRI_07540 (sigA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
catr03021
]
CATRI_07540 (sigA)
Transcription machinery [BR:
catr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CATRI_07540 (sigA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_20
Motif
Other DBs
NCBI-ProteinID:
WJY63580
LinkDB
All DBs
Position
1532738..1534135
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AA seq
465 aa
AA seq
DB search
MAAKESSSDKALTDGGEVSNQETTESAPVKKAARKVAKKAARKATKKTARKAAKKTTKKS
AKKTAAKATTKAEVVDGVDGEDSPTPEVEDEADVNVDFDPELAEDDDTEVTLDEDELGDE
AETEEVAEDEGASVWDEDESATLRQARKDAELTASADSVRAYLKQIGKVALLNAEQEVSL
AKRIEAGLYATHRMEQMEAAFAGGDKDAKLTPAVKRDLRAIARDGRKAKNHLLEANLRLV
VSLAKRYTGRGMAFLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAITRAMADQA
RTIRIPVHMVEVINKLGRIQRELLQDLGREPTPGELAKEMDITEEKVLEIQQYAREPISL
DQTIGDEGDSQLGDFIEDSEAVVAVDAVSFTLLQDQLQDVLQTLSEREAGVVRLRFGLTD
GMPRTLDEIGQVYGVTRERIRQIESKTMSKLRHPSRSQVLRDYLD
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
gtggcagccaaggaatcttcttcagacaaggcactcacggacggcggggaggtttccaat
caggagacgaccgagtccgccccggtgaagaaggccgcccgcaaggtggccaagaaggca
gcgcgcaaagcaaccaagaagactgcgcgcaaggccgcaaagaaaacgactaagaagtcg
gccaagaagactgcggctaaagcaacgaccaaggctgaagtagtcgacggcgttgacggg
gaagattctcctaccccggaagtcgaggacgaggccgacgtcaacgtcgacttcgatccg
gagctggctgaggacgacgacacggaagtcactctcgacgaagacgagttgggcgacgaa
gccgagaccgaggaagtagctgaggacgaaggcgcttctgtctgggacgaagacgagtcc
gctacgttgcgccaggcccggaaggacgctgagctcacggcgtcggctgactcggtgcgc
gcttacctcaagcagattggcaaggtcgctctcctcaacgccgagcaagaggtctccctg
gccaagcgcatcgaggctggcctgtacgccactcatcgcatggagcagatggaagctgct
ttcgccggtggggacaaggacgccaagctgacccccgccgtcaagcgtgatttgcgcgcc
atcgcccgcgacggccgcaaggccaagaaccacctgttggaggctaacctccgcctcgtg
gtctcgctagcaaagcgctacaccggccgcggcatggcctttctcgaccttatccaggag
ggcaacctgggcctgatccgcgcggtggagaagttcgactacaccaagggatataagttc
tctacttacgccacctggtggatccgccaggccatcacccgtgcgatggcggaccaagcc
cgcacgattcgtatcccggtgcacatggtcgaagtcatcaacaagcttggccgtatccag
cgtgagctgctccaggatctgggccgcgaacccaccccgggcgagttggcgaaggaaatg
gacatcaccgaggagaaggttctcgagatccagcagtacgctcgtgagcccatttccctc
gaccagaccatcggcgacgaaggtgactcccagctcggtgacttcatcgaggactctgag
gcagtcgtcgccgtcgatgccgtctccttcactctcctgcaagatcagctgcaggatgtg
ctgcagactctctcggagcgtgaagctggtgtggtccgtctgcgctttggcctgaccgac
ggcatgccacgcaccctcgatgagatcggtcaggtgtacggggtcacccgggagcgtatc
cgccagatcgagtccaagacgatgtcgaagctgcgccacccgtcgcgttcacaggtgctc
cgcgactacctggactag
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