Corynebacterium atrinae: CATRI_08320
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Entry
CATRI_08320 CDS
T09346
Symbol
ffh
Name
(GenBank) Signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
catr
Corynebacterium atrinae
Pathway
catr02024
Quorum sensing
catr03060
Protein export
catr03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
catr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
CATRI_08320 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
CATRI_08320 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CATRI_08320 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
catr02044
]
CATRI_08320 (ffh)
Enzymes [BR:
catr01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
CATRI_08320 (ffh)
Secretion system [BR:
catr02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
CATRI_08320 (ffh)
Eukaryotic Sec-SRP protein
CATRI_08320 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
cobW
CbiA
AAA_22
APS_kinase
MeaB
AAA_16
AAA_30
Zeta_toxin
nSTAND3
MMR_HSR1
AAA_18
NPHP3_N
AAA_25
NTPase_1
AAA_33
TsaE
NB-ARC
SRPRB
AAA_31
ResIII
Thymidylate_kin
DUF6398
MobB
ATP_bind_1
NACHT
AAA
ArsA_ATPase
AAA_28
SLFN-g3_helicase
ABC_tran
AAA_14
AAA_5
6PF2K
Motif
Other DBs
NCBI-ProteinID:
WJY63736
LinkDB
All DBs
Position
complement(1698032..1699654)
Genome browser
AA seq
540 aa
AA seq
DB search
MFESLSDRLQSALTGLRGKGKLTEADINATAREIRLALLEADVSLLVVRGFIKRIKERAA
GAEVSEALNPAQQVVKIVNEELVEILGGETRRLQLAKTPPTVIMLAGLQGAGKTTLAGKL
AKHLTKQGHTPMLVACDLQRPGAVQQLQIVGERAGVPTFAPDPGTSIDSYEHEMGTSHGD
PVAVAQAGIEEARRTQHDVVIVDTAGRLGIDETLMTQARNIRDAVNPDEVLFVIDAMIGQ
DAVSTAEAFRDGVDFTGVVLTKLDGDARGGAALSIREVTGKPIMYASTGEKLEDFDVFHP
ERMASRILGMGDVLSLIEQAEQVFDQKQAEETAAKLGAGELTLEDFLNQMLMIRRMGPIG
NLLKMLPGGKQMNQMADMVDEKQLDRIQAIIRGMTPAERSNPKILNASRRKRIAAGSGVG
VTDVNQLVDRFFEAKKAMSQMAGQFGMPGAGMNRSATKKKPKGRKGKGGKRKPVKNRPTQ
PQMPGGMPGMPDMAQLQQMQKQMEAGGGMPGMPKLPGMPKMPKGMEGIDLDNLDFGQGKK
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
gtgtttgagtctctgtccgaccgcctccaatccgccctcactgggctgcgcggaaaaggc
aagctcaccgaggcggacatcaacgccacggcccgcgagattcgcctcgcgctgttggaa
gccgacgtctccttattggttgtccgcggctttatcaagcgcatcaaggagcgcgccgca
ggagccgaggtctccgaggcgctgaaccccgcgcaacaggtagtcaagatcgtcaacgag
gagctggtggagatcctcggcggtgaaacccgtcgcctccagctggccaagaccccgccg
accgtcatcatgctcgccggcctgcagggtgccggtaagacgaccctggctggcaagctg
gccaagcacctgactaagcagggtcacaccccgatgctcgtggcctgtgacctgcagcgc
cccggtgccgtccagcagctgcagatcgtcggtgagcgcgcgggtgttcccaccttcgcc
cccgacccgggcacgtcgattgattcttatgagcatgagatgggcacctcccatggtgat
cccgtcgccgtcgcgcaagcgggcatcgaagaagctcgccgcacccagcatgacgtggtc
atcgtcgataccgccggtcgcttgggcatcgatgaaacgctgatgacgcaggcccggaac
atccgcgatgccgtcaaccccgacgaagtcctattcgtcatcgacgctatgatcggccag
gacgcggtgagcactgcggaagctttccgcgacggcgtcgatttcaccggtgtcgtcttg
accaagctcgatggcgacgcccgcggtggtgccgcactctccatccgcgaggtcaccggc
aagcccatcatgtacgcctccacgggtgaaaagctcgaagacttcgatgttttccaccct
gagcgcatggccagccgcatcctcggcatgggtgacgtgctcagcctcatcgagcaggcc
gagcaggtctttgaccagaagcaggcggaagaaaccgccgccaaactcggcgcgggcgag
ctcaccctcgaggacttcctcaatcagatgctcatgattcgccgcatgggccccattggc
aacctgctcaagatgctgcccggcggcaagcagatgaaccagatggccgacatggtcgac
gagaagcagcttgatcgcatccaggccatcatccgcggcatgacccccgctgagcgctcg
aatccgaagatcctcaatgcctcccgtcgcaagcgcatcgccgcaggctccggcgtcggc
gtcaccgacgttaatcagctcgtggaccgcttctttgaagccaagaaggccatgagccag
atggccgggcagttcgggatgccaggtgcgggcatgaatcgatccgccaccaagaagaag
cccaagggccgcaagggtaagggtggcaagcgcaagccggtaaagaatcgtcccactcag
ccgcagatgccgggtgggatgccgggaatgcccgacatggctcaactgcagcagatgcaa
aagcagatggaagctggcggcggaatgcccggcatgcctaagctcccggggatgccaaag
atgcccaagggcatggagggtatcgacttggacaatctcgactttgggcaaggcaaaaag
tag
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integrated database retrieval system
