Catenovulum adriaticum: OLW01_00020
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Entry
OLW01_00020 CDS
T08659
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
catt
Catenovulum adriaticum
Brite
KEGG Orthology (KO) [BR:
catt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
catt03032
]
OLW01_00020 (gyrB)
03400 DNA repair and recombination proteins [BR:
catt03400
]
OLW01_00020 (gyrB)
Enzymes [BR:
catt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
OLW01_00020 (gyrB)
DNA replication proteins [BR:
catt03032
]
Prokaryotic type
DNA Topoisomerases
OLW01_00020 (gyrB)
DNA repair and recombination proteins [BR:
catt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
OLW01_00020 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
WAJ70244
LinkDB
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Position
3679..6096
Genome browser
AA seq
805 aa
AA seq
DB search
MSEHVYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGHCSDI
IVTIHSDGSVSVRDDGRGIPTEIHPEEGVSAAQVIMTVLHAGGKFDDNSYKVSGGLHGVG
VSVVNALSDDLQLTIRRQGKVHQQKFKLGDPVKPLDVIGDTDSSGTEIRFWPSPTIFGDT
VFHYDILAKRLRELSFLNSGVSIRLKDERDGKNDHFKYEGGIQAFVEYLNRNKTPIHKTA
FNVNVEREDGITVEVAAQWNDSFQENIFCFTNNIPQRDGGTHLAGFRGALTRTLNSYMEK
EGHAKKSKVATTGDDSREGLTAVVSVKVPDPKFSSQTKDKLVSSEVKSAVEQSVGEKLND
YLLENPSDVKAIVSKIVDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPSLSE
LYIVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVGTLITAMGCGIG
RDEYNPDKLRYHSVILMTDADVDGSHIRTLLLTFFYRQMPEIIERGHIFIAQPPLYKVKK
GKQEQYLKDELAYEAYLTSIALDGAELYVNDSAPAISGLALEQLVKDYQAMENIITRLSR
NYNLALLNELKFVETLTEESLKDEAKVKAWAETLIGKLESSQDGSSIFETELVFDSEVQL
HVPRFNVRTHGVDHQYNFDLEFINSADYKMITKTGDVIGSLIEEGAYVKRGERKFEVSNF
AQALAWLMKESKKGLYAQRYKGLGEMNPDQLWETTMDPETRRMLKVTIEDAVAADQLFST
LMGDHVEPRREFIEKNALNVSNLDV
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagcatgtatacgactcgtcatcgattaaagtcttaaaagggttagacgcagta
cgcaaacgtccaggtatgtacataggtgataccgatgatggaacaggtttacaccacatg
gtatttgaagtggtggataatagtatagatgaagcgttagctggtcactgttctgatatt
attgtgaccattcattctgatggttctgtttctgtacgagacgatggccgtggcattcca
accgaaattcatcctgaagagggtgtgtctgctgctcaagttattatgaccgtattgcac
gcgggcggtaaatttgatgataattcatataaagtatcaggtggtttgcacggtgttggt
gtttcggttgttaacgctttatctgatgatttacaacttacgattcgtcgccaaggtaaa
gttcatcaacaaaaattcaaattgggtgatccggttaaacctttagatgtgattggtgat
acagattcatctggtactgaaattcgtttttggccatctccaactatttttggcgataca
gtttttcattatgatattttggcaaaaagattaagagaattaagcttccttaattctggt
gtatctattcgattgaaagatgagcgtgacggcaaaaatgaccactttaagtatgagggt
ggtattcaagcgtttgttgaatatttaaatcgaaacaaaactccgattcataaaacagct
tttaatgtaaatgttgaacgcgaagatggcattaccgttgaagtagcagcgcagtggaat
gattctttccaagagaatattttttgttttaccaataatatcccacagcgggatggcgga
actcacttagctggttttcgaggtgcattaactcgaactttaaattcttatatggaaaaa
gaaggtcatgctaaaaaatctaaagttgcgacaacaggtgacgattcacgcgaaggttta
actgccgttgtttcagttaaagtgccggatcctaagttctcttcacaaactaaagataaa
ctcgtttcatctgaagttaaaagtgcagttgagcagagtgtgggtgaaaaattaaatgac
tatttattagaaaacccaagtgatgtaaaagcgatagtgagtaagattgttgatgcagct
agagctcgtgaagccgctagaaaagcacgagaaatgacacgacgtaaaggtgcattagat
attgcaggcttaccgggtaaacttgcagactgccaagaaaaagatccatcactttctgaa
ctatacatagtggagggtgactcagctggcggttcagctaagcagggtcgtaatcgtaaa
aaccaagccattttgcctttgaaaggtaaaatcttaaatgttgaaaaagcacgttttgac
aaaatgctatcgtcgcaagaagtgggtactcttatcaccgcaatggggtgtggcataggt
cgtgatgaatataacccggataaacttcgttatcattcagtgattttaatgacggatgcg
gatgtggatggttcgcatatccgtacattgttattaacctttttctatcgccaaatgcct
gaaattattgagcgtggtcatatttttattgctcaaccccctttatataaagttaaaaaa
ggcaaacaagaacagtatttaaaagacgaattagcttatgaagcttacctaacaagcatt
gctttagatggtgctgagctgtacgtaaatgattctgcgcctgctatttctggtttagca
ctagagcaattagttaaagattatcaagcgatggaaaacatcattacacgcctgtctcga
aactataatcttgcattattaaacgagctaaaatttgttgaaactttaactgaagagtcg
ttaaaggatgaagctaaagttaaagcttgggctgaaacgctaattggaaaattagaatca
agccaggatggtagttcaatttttgaaactgaactcgtatttgatagcgaagtacaatta
catgtacctcgttttaatgttcgtactcatggtgttgatcatcaatataattttgacctt
gaatttattaattcagccgattataaaatgataaccaaaacgggtgatgtgattggttcg
ctgattgaagaaggcgcttatgtgaaaagaggcgagcgtaaatttgaagtgagcaatttt
gctcaagccttagcttggttgatgaaagaatcgaaaaaaggcttatacgcacagcgttat
aaaggtttgggtgagatgaacccagatcaattatgggaaacgaccatggacccagaaact
cgccgaatgcttaaagtaactattgaagatgcagttgctgctgatcaattgttttcaacc
ttgatgggcgatcatgtagagccacgaagagagtttattgaaaagaatgcgcttaacgta
agtaatcttgacgtataa
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