Catenovulum adriaticum: OLW01_01520
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Entry
OLW01_01520 CDS
T08659
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
catt
Catenovulum adriaticum
Pathway
catt02020
Two-component system
catt02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
catt00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
OLW01_01520
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
OLW01_01520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
catt03021
]
OLW01_01520
Transcription machinery [BR:
catt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
OLW01_01520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
aRib
Motif
Other DBs
NCBI-ProteinID:
WAJ70526
UniProt:
A0ABY7AQJ6
LinkDB
All DBs
Position
complement(361431..362939)
Genome browser
AA seq
502 aa
AA seq
DB search
MKQSIQLKFGQHLTMTPQLQQAIRLLQLSSLDLQQEIQEALDGNPLLETDEPQDDFESLE
EYNQTKKQKEDQNRKENNNQENGEQDEYSVRDSHDEMTNQDIPDQLPTDSTWDDHFTQGS
SSNSSSSNYSSDEDTVYQGETIDSIRDHLLWQMDLTPFSPLDRGIAIAIIDAIDDSGYLT
VSAEDILESLGNEEVELDEVECVLKRIQVFDPIGVASRTTQECLLIQLNQFADDTPWLNE
AKLVIKNYIALLGNRDYRTLLRKAKLKEDDLKQIMKLIQSLNPRPGNSVVAEEAQYIVPD
VSVKKIKNKWIVELNPESVPKLRLNAEYAAMSKTARNTADSQFIRSHMQEAKWFIKSLES
RNETLLKVARCIVKQQQDFFEHGEEAMKPMVLNDVAEEVEMHESTISRVTTQKYLHTPAG
IFELKYFFSSHVSTENGGECSSTAIRALIKKLVSAENPAKPLSDSKIAELLADQGIKVAR
RTIAKYRESLSIPPSNQRKSLL
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaatcaattcagttaaaatttggtcagcatttaaccatgactcctcaattgcag
caggcgattcgtctactgcaactgtcatcgttagacctacaacaagaaattcaagaagcg
cttgatggcaatccgcttttagaaacggatgaaccacaggacgacttcgaatcgcttgaa
gaatataaccagaccaaaaaacaaaaagaagatcaaaaccgcaaagaaaataacaaccaa
gaaaacggcgaacaagatgaatattcggttcgtgatagtcatgatgaaatgactaatcag
gatattcccgatcaactaccaactgatagcacatgggacgaccatttcactcaaggcagt
agcagtaattcaagttcaagcaactacagctcagatgaagataccgtttaccaaggcgaa
accatagactcgatccgagatcaccttttatggcaaatggatttaacccccttttctcca
ctcgatcgtggcatcgccatagccatcattgatgcaattgatgattcaggctacctgact
gtcagcgcagaagatattttagaaagcttaggcaatgaagaagtagagttagatgaggta
gagtgcgtacttaaacgcattcaagtatttgacccgataggtgtcgcatctcgaaccaca
caagagtgcttattaattcaattaaaccaattcgctgacgacacaccatggctaaatgaa
gctaagttagtcatcaaaaattacattgccctactaggcaaccgtgattatcgaacgtta
ttaagaaaagccaagctaaaagaagatgacttaaaacaaatcatgaagctgatacaatcg
ttaaacccaagaccgggtaatagcgttgtcgcagaagaggctcaatacattgtgcctgac
gtctcagttaaaaagataaaaaataaatggattgtagagctaaatccagaaagtgtgcct
aaacttaggttaaacgcagaatatgcagctatgtcaaaaacagctcgtaatacggccgat
agccagtttattcgctcacatatgcaagaagccaaatggtttataaaaagtttagaaagc
cgaaatgagactttacttaaagttgcgcgttgtattgtaaaacaacaacaagattttttt
gaacatggcgaagaagccatgaaacctatggtgctgaatgatgttgccgaagaagtagaa
atgcacgaatcaactatttcacgagtaacaacgcaaaaatacttacatactccagccggt
atttttgaattgaagtatttcttctcaagccatgtcagcactgaaaacggtggggagtgt
tcatcgaccgcgattagggcacttatcaaaaaacttgtttctgctgaaaacccagcaaag
ccgttaagtgatagcaagatagctgaattgctagccgaccaaggtataaaagtggctcgt
agaaccattgctaaataccgagagtcgctatctattccgccatctaatcaacgaaaaagc
ctattgtag
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