Catenovulum adriaticum: OLW01_13670
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Entry
OLW01_13670 CDS
T08659
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
catt
Catenovulum adriaticum
Brite
KEGG Orthology (KO) [BR:
catt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
catt03400
]
OLW01_13670 (sbcD)
DNA repair and recombination proteins [BR:
catt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
OLW01_13670 (sbcD)
Archaeal homologous recombinant proteins
OLW01_13670 (sbcD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
FBPase_2
Cas3_HD
Motif
Other DBs
NCBI-ProteinID:
WAJ70172
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All DBs
Position
3120855..3122102
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AA seq
415 aa
AA seq
DB search
MRLLHTSDWHLGQNFYGKSRKNEHQAFLDWLLKQIEQHQIDALIVAGDLFDTGAPPSYAR
EILNQFVVKLQAQHCQLVLLGGNHDSVAMLNESKDVFSCLNSHLIANVQSNPNKQVVTLI
DKTGEPAAQCCAIPFVRPRDVLSSHSNKEQSSQKPDLLNAISQHYQNIYAAAQTKNEQLG
QNLPIIGTGHLTVVNASTSDSVRDIYIGTLEAFPASQFPNFDYLALGHIHQAQTIADKPH
WRYSGSPIAMSFDESHREKSVVFVELITGQAARVETLPIPNFQPIVCLTGDLAQIELQLE
AQFKDPNSTQIAWLDLEIDSADFHSDVQKQAEQICQQYPVEILLVRRKRQHKQAGFSQYE
KLSLDEIDPSQVFKQKLIEQQVNEQQTQKLSTLFAKTVEQIQPVTGQSNLNESEK
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtttattgcatacctcagactggcatttagggcaaaatttttatggtaaaagccgt
aaaaatgagcatcaagcctttcttgactggctattaaaacaaattgagcagcatcaaata
gatgcactcattgtcgctggtgatctgtttgataccggcgcgccgcccagttacgcacgc
gaaatacttaaccagtttgttgtaaaattgcaagcacagcactgccaattagttttgtta
ggtggcaatcatgattcggttgctatgctaaacgaatcaaaagatgtgttttcatgctta
aatagccatttaattgccaacgtgcaaagcaatccaaacaaacaagtagttaccttaatc
gataaaacgggcgaacctgcggctcaatgctgcgccattccatttgttcgcccgagagat
gtattaagcagtcattcaaacaaagaacaaagctcacaaaagcctgatttattaaacgcg
attagccagcattaccaaaatatttatgccgctgcgcaaactaaaaatgaacaactaggg
caaaatttacccattattggtacaggtcatttaaccgtggtaaacgccagcaccagtgat
tctgtacgcgatatttacataggcacgttagaggcttttccggcgagccagtttcctaat
tttgattatttagcactgggtcatattcaccaagctcaaaccattgccgacaaaccacat
tggcgatatagcggctctcctatcgccatgagttttgatgaatcacatcgcgaaaaatcc
gtagtttttgtggaactcattaccggccaagctgcccgagttgaaactttgcccattcca
aattttcaacctattgtatgtttaactggtgatttagctcaaattgaattacaacttgaa
gcgcaatttaaagacccaaattcaactcaaatcgcttggctcgatcttgaaatagacagc
gccgattttcattcagacgttcaaaaacaagccgaacaaatttgccaacaatatccggtt
gaaattttattagtcagacgtaaacgccaacataaacaagccggttttagccagtatgaa
aaactcagcttagatgaaatagatcccagccaagtttttaaacaaaaactcattgagcaa
caagtaaatgaacaacaaacccaaaaactcagcaccttatttgcaaaaacagttgagcaa
atacagcctgtaactgggcagtctaatttaaatgaatctgaaaagtaa
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