Catenovulum adriaticum: OLW01_16610
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Entry
OLW01_16610 CDS
T08659
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
catt
Catenovulum adriaticum
Pathway
catt03030
DNA replication
catt03430
Mismatch repair
catt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
catt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OLW01_16610 (dnaE)
03430 Mismatch repair
OLW01_16610 (dnaE)
03440 Homologous recombination
OLW01_16610 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
catt03032
]
OLW01_16610 (dnaE)
03400 DNA repair and recombination proteins [BR:
catt03400
]
OLW01_16610 (dnaE)
Enzymes [BR:
catt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OLW01_16610 (dnaE)
DNA replication proteins [BR:
catt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
OLW01_16610 (dnaE)
DNA repair and recombination proteins [BR:
catt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
OLW01_16610 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
WAJ72360
UniProt:
A0ABY7ASR0
LinkDB
All DBs
Position
pCadTS8_2:140587..144081
Genome browser
AA seq
1164 aa
AA seq
DB search
MIDPKFIHLRVHSDFSMVDGLNKVKPIVSNIAELKMPAVAVTDQGNLCGLVRFYGAANGA
GIKPIVGADFWVKSDELGDELFRLVVLAKDNQGYKNLTLLISKAYLRGSIQDKPVIDKNW
LIEHAEGLILLSGGREGDLGIALIKGNQNMADKITQFYQTYFADHYYIELLRTGRENEES
YLHMAVEWAQQHDLPVVATNEVCFLKAEDFAAHEIRCAIHDGYTLEDKRRPKRYSEQQYM
RSEQEMCELFSDIPEALANSVEIAKRCNVTIRLGEYFLPSFPTGGMSTEDFLVKVSQEGL
EERLEFLFPDAQERLEKRPEYDDRLKIELECINQMGFPGYFLIVMEFIQWSKDNNIPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMDRRDEVIDHVAQ
MYGRDAVSQIITFGTMAAKAVVRDVGRVLGHPFGFVDRISKLIPGDPGMTLAKAFDVESR
LPELYEADEEVRSLVDMARILEGTTRNAGKHAGGVVISPTTITDFAPLYCDSEGKQPVTQ
FDKNDVEEAGLVKFDFLGLRTLTIMQWAIDMANVRLQKEGKPDIDITAIPIDDKKSFVTL
KNFETTAVFQLESRGMKDLIKRLQPDCFEDMIALVALFRPGPLQSGMVDNFIDRKRGREE
ISYPDAQYQHECLKEILDPTYGIILYQEQVMQIAQVMAGYSLGGADLLRRAMGKKKPEEM
AKQRSTFAEGAANNQIDPDLAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWMKTHYPS
EFMAAVLSADMDNTDKVVTLVDEIERMKLKIIPPDVNQGLYKFTVNEHGDVVYGIGAVKG
VGEGPIEAIIEARSKGGAFKDLFDFCARVDLKRVNRRVLEKLIYAGAMDALGPKDVKGPH
RAAIMATLSDAMRAADQHAKDEMAGQTDLFGLLTTEPEEVEQAFAKVPMWPEEVWLDGEK
ETLGLYLTGHPINRYRKELKNYASARISELSPTRRDEEVATAGLIIGVKIMVNKKGRRWG
IITLDDKSARIDIRFFPDMYDEYEELLVKDKIVVVAGPVEHDDFSGGLGMTAKRMQDIVQ
LREKHVKSVSVNLVQNNLPANAIEQLTEKLTPYKEGVTPVIFNYLRDNAKAEIKVGVQWY
VTPADSLLYDLRQIVGETQVSLVF
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atgatcgatcctaaatttattcatttacgtgttcactcagatttttctatggtggatggc
ttaaataaagtcaaacccatagtgtccaatattgctgagctaaaaatgccggcggttgcg
gtaacggatcaaggtaacttatgtggcttagtgcgtttttatggtgcggcaaatggtgca
ggaataaaaccgattgtaggagctgatttttgggttaaaagtgacgaactaggtgatgag
ctttttcgtttagtggtactagctaaagataatcagggctataaaaatttaaccttactc
atttcaaaagcctacttgagaggttcaattcaagataaacccgttattgataaaaattgg
ttaattgaacacgccgaagggcttattttattatcgggtgggcgcgaaggtgatttaggg
attgcgttgattaaaggcaatcaaaatatggcggataaaattacccaattttatcaaact
tattttgctgatcattattatatcgagttacttagaactggtcgtgagaacgaagaaagc
tatttacatatggcggtagagtgggcgcagcagcacgatttaccagttgttgcaaccaat
gaagtctgttttttaaaagccgaagattttgccgcgcatgaaatccgctgtgccatccat
gatggttatacgctcgaagataaacgcagacctaagcggtactcagagcagcaatatatg
cgttctgaacaagagatgtgtgagctattttctgatattccagaagcactggcaaactca
gttgaaattgccaaacgttgtaatgtgaccatacgtttaggtgaatattttttacctagt
tttccaacaggtggcatgtcgacggaagattttttagttaaagtatcgcaagaaggttta
gaagaaaggctcgaatttttatttccagatgctcaagagcgacttgaaaaaagaccagaa
tacgatgatagacttaaaattgagttagaatgtattaaccaaatgggttttcccggttat
ttcttaatcgttatggaattcatccaatggagtaaagacaacaatattccagtcggccca
ggccgtggttcaggtgctggttcattagtcgcttatgcgcttaaaatcacagatttagat
ccattagaatttgatttactcttcgaacgatttcttaaccctgaacgggtatccatgccc
gattttgacgtcgacttttgcatggataggcgcgatgaagtaatagatcatgtcgcgcaa
atgtatggccgtgatgcggtgtcacaaattattacctttggtacgatggcagctaaggcg
gttgttagagacgtgggtcgggtgttaggccatccgtttggttttgttgatcgtatttca
aaattaatcccgggtgatcccggtatgacattagctaaagcctttgacgttgaatccaga
ttacccgaattatatgaagcagatgaagaagttcgttcgctcgttgatatggctcggata
ttagaaggcactacccgaaatgccggcaaacacgccggtggtgtggttatttctccaact
actattaccgattttgcaccgctttattgtgattcagaaggtaaacagccagtcactcag
tttgataaaaacgatgttgaagaagcaggtttagttaaatttgacttcttaggcttgcgc
acactgacgataatgcagtgggctattgatatggcaaatgttcgcttgcaaaaagaaggc
aagccggatatcgacattaccgctattccgattgatgataaaaagagttttgttacttta
aaaaactttgaaacgaccgcggtattccagcttgaatcacgcggaatgaaagacttaatt
aaacgtctgcaacccgattgttttgaagatatgattgcattggtggctttatttaggcca
ggcccattgcaatcaggcatggttgataactttattgaccgtaaacgcgggcgtgaagaa
atctcttacccagatgctcaataccagcatgaatgtttaaaagaaattttagacccaacc
tacggtattattttataccaagagcaggttatgcaaattgcgcaggtgatggcgggttat
tcacttggcggcgcggatttattgcgccgtgctatgggtaagaaaaagcctgaagaaatg
gcaaaacagcgcagtacctttgctgaaggggcggctaataaccaaattgatcccgatctt
gcaatgaagatttttgatttggttgaaaaatttgcgggttatggttttaacaaatctcac
tcagcagcttatgctttagtgtcttatcaaaccttatggatgaaaacgcattatccatct
gagtttatggctgcagtattatcagcagatatggataatactgacaaagtggttacgtta
gtggatgaaattgagcgaatgaagcttaaaattattccacctgatgtgaaccaagggttg
tacaaatttaccgtaaatgaacacggagatgtcgtgtacggtataggcgcagtaaaaggt
gtgggtgaaggcccaattgaagctattattgaagcgcgtagcaaaggtggcgcatttaaa
gatttattcgacttttgcgccagagtagatttaaaacgggtaaatcgccgcgtattagaa
aaactaatttacgcaggggctatggatgcattagggccaaaagatgttaaaggcccacat
cgcgccgcgattatggcaacattaagcgatgcgatgcgcgctgctgatcaacatgcaaaa
gatgaaatggccggtcaaaccgatttatttggtttattaaccacagagcctgaagaagtt
gagcaagcttttgcaaaagtgcctatgtggcccgaagaagtttggctggatggtgaaaaa
gaaacgctcgggttatatttaacgggccatcccattaatcgttaccgtaaagaattaaaa
aattacgcaagtgccagaataagtgagttatcaccgaccagacgagatgaagaagtggca
actgccggtttaattatcggggttaagattatggtcaataaaaaaggccgccgctggggc
attattacgctagatgataaaagtgcacgtattgatattcgatttttcccagatatgtat
gatgaatatgaagagctgctggtaaaagataaaatagtggttgtggcgggtccggttgag
catgacgatttttcgggcggcttagggatgacagccaaacgtatgcaagatattgtgcaa
ttgcgtgaaaaacacgtaaaatcagtctcggttaatttagtgcaaaataatttgccagcg
aatgcgattgaacaattaacagaaaagctaaccccctataaagagggcgttacccctgtt
atttttaactatttacgcgataatgcaaaagcggaaattaaagttggtgtacaatggtat
gtgacaccggcagatagtttgctgtatgatctacgccaaatagttggtgaaacgcaggtt
tcgttagttttttaa
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