Cercocebus atys (sooty mangabey): 105572413
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Entry
105572413 CDS
T07242
Symbol
COL4A6
Name
(RefSeq) collagen alpha-6(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
caty
Cercocebus atys (sooty mangabey)
Pathway
caty04151
PI3K-Akt signaling pathway
caty04382
Cornified envelope formation
caty04510
Focal adhesion
caty04512
ECM-receptor interaction
caty04518
Integrin signaling
caty04820
Cytoskeleton in muscle cells
caty04926
Relaxin signaling pathway
caty04933
AGE-RAGE signaling pathway in diabetic complications
caty04974
Protein digestion and absorption
caty05146
Amoebiasis
caty05165
Human papillomavirus infection
caty05200
Pathways in cancer
caty05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
caty00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
105572413 (COL4A6)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
105572413 (COL4A6)
04518 Integrin signaling
105572413 (COL4A6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
105572413 (COL4A6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
105572413 (COL4A6)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
105572413 (COL4A6)
09154 Digestive system
04974 Protein digestion and absorption
105572413 (COL4A6)
09158 Development and regeneration
04382 Cornified envelope formation
105572413 (COL4A6)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
105572413 (COL4A6)
09162 Cancer: specific types
05222 Small cell lung cancer
105572413 (COL4A6)
09172 Infectious disease: viral
05165 Human papillomavirus infection
105572413 (COL4A6)
09174 Infectious disease: parasitic
05146 Amoebiasis
105572413 (COL4A6)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
105572413 (COL4A6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
caty04147
]
105572413 (COL4A6)
00536 Glycosaminoglycan binding proteins [BR:
caty00536
]
105572413 (COL4A6)
Exosome [BR:
caty04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
105572413 (COL4A6)
Glycosaminoglycan binding proteins [BR:
caty00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
105572413 (COL4A6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
105572413
NCBI-ProteinID:
XP_011886449
Ensembl:
ENSCATG00000039252
LinkDB
All DBs
Position
Unknown
AA seq
1689 aa
AA seq
DB search
MHPGLWLLLVTLCLTEELAGAGEKSYGKPCGGQDCSGSCQCFPEKGARGRPGPIGIQGPS
GPQGFTGSTGLSGLKGERGSPGLLGPYGPKGDKGPMGVPGFLGINGIPGHPGQPGPRGPP
GLDGCNGTQGAVGFPGPDGYPGLLGPPGLPGQKGSKGDPVLAPGSFKGMKGDPGLPGLDG
ITGPQGAPGSPGAVGPAGPPGLQGPPGPPGPPGPDGNMGLGFQGEKGVKGDVGLPGPAGP
PPSTGELEFMGFPKGKKGSKGEPGPKGFPGISGPPGFPGLGTTGEKGEKGIPGLPGPRGP
MGSEGVQGPPGQQGKKGTLGFPGLNGFQGIEGEKGDIGLPGPDVFIDIDGAVISVPGNPG
DPGVPGLPGLKGDEGIQGLRGPSGVPGLPALSGVLGALGPQGFPGLKGDQGNPGRTTIGA
AGLPGRDGLPGPPGPPGPPGPEFEAETLHNKEPGFPGLRGEQGPKGNPGLKGIKGDSGFC
ACDGGVPNTGPPGEPGPPGPRGLIGLPGLKGARGDRGSGGAQGPAGAPGFVGSPGPSGPK
GKKGEPILSTISGMPGDRGDSGSQGFPGVIGKPGNDGVPGLPGLPGLPGDGGQGFPGEKG
LPGLPGEKGHPGPPGLPGIGLPGLPGPRGLPGDKGKDGLPGQQGPPGSKGITLPCIIPGS
YGPSGFPGTPGFPGPKGSRGLPGTPGQPGSSGNKGKPGSPGLVHLPELPGFPGPRGEKGL
PGFPGLPGKDGLPGTIGSPGLPGSKGATGDIFGAENGAPGEQGLQGLTGDKGLLGDSGLP
GLKGVYGKPGLLGPKGERGSPGTPGPVGQPGTPGSSGPYGIKGKSGLPGAPGFPGTSGHP
GKKGTRGEKGPPGSIVKKGLPGLKGLPGNPGLIGLKGSPGSPGVAGLPALSGPKGEKGSV
GFVGFPGIPGLPGIPGTRGLKGIPGSTGKMGPSGHAGTPGEKGDRGNPGPVGIPGPRRPM
SNLWLKGDKGSQGSAGSDGFPGPRGDKGEAGQPGPPGLPGAPGLPGTIKGVSGKPGPPGF
MGIRGLPGLKGSSGITGFPGMPGESGSQGIRGSSGLPGTSGLPGLKGDNGQTLEISGSPG
PKGQPGESGFKGTKGRDGPIGNIGFPGNKGEDGKVGVSGDVGLHGAPGFPGVAGMRGEPG
LPGSSGHQGAIGPLGPPGLIGPKGFPGFPGLHGLNGLPGTKGTHGTPGPSITGVPGPAGL
PGPKGEKGYPGIGIGAPGKPGLRGQKGDRGFPGLQGPAGLPGAPGISLPSLIAGQPGDPG
RPGLDGERGRPGPPGPPGPTGPSSNQGNTGDPGFPGIPGPKGPKGDQGIPGFSGLPGELG
LKGMRGEPGFMGTPGKVGPPGDPGFPGMKGKAGPRGSSGPQGAPGQTPTAEAVQVPPGPL
GLPGIDGIPGLTGDPGAQGPVGLQGSKGLPGIPGKDGPSGLPGPPGALGDPGLPGLQGPP
GFEGAPGQQGPFGMPGMPGQSARVGYTLVKHSQSEQVPLCPIGMSQLWVGYSLLFVEGQE
KAHNQDLGFAGSCLPRFSTMPFIYCNINEVCHYARRNDKSYWLSTTAPIPMMPVSQTQIP
QYISRCSVCEAPSQAIAVHSQDITIPQCPLGWRSLWIGYSFLMHTAAGAEGGGQSLVSPG
SCLEDFRATPFIECSGARGTCHYFANKYSFWLTTVEERQQFGELPVSETLKAGQLHTRVS
RCQVCMKSL
NT seq
5070 nt
NT seq
+upstream
nt +downstream
nt
atgcaccctgggttgtggctgctcctggttacgttgtgcctgacggaggaactggcagga
gcgggagagaagtcttatggaaagccgtgtgggggccaagactgcagtgggagctgtcag
tgttttcctgagaaaggagcgagagggcgacctggaccaattggaattcaaggcccatca
ggtcctcaaggattcactggctctactggtttatcgggattgaaaggagaaaggggttcc
ccaggccttctgggaccttatggacccaaaggagataagggtcccatgggagttcctgga
tttcttggcatcaatgggattccgggccatcctggacagccgggccccagaggcccacct
ggtctggatggctgtaatggaactcaaggagctgtcggatttccaggccctgatggctat
cctgggcttctcggaccacctgggcttcctggtcagaaaggatcaaaaggtgaccctgtc
cttgctccaggtagtttcaaaggaatgaagggggatcctgggctgcctggactggatgga
atcactggcccacaaggagcacccggatctcctggagctgtaggacctgcaggaccacca
ggattacaaggtcctccagggcctcctggtcctcctggtcctgatgggaatatggggcta
ggttttcaaggagagaaaggagtcaagggggatgttggcctccctggcccagcaggacct
ccaccatctactggagagctggaattcatgggattccccaaagggaagaaaggatccaag
ggtgaaccagggcctaagggttttccaggcataagtggccctccaggcttcccgggcctt
ggaactactggagaaaagggagaaaagggaatccctggtttgccaggacctaggggtccc
atgggttcagaaggagtccaaggccctccagggcaacagggcaagaaagggaccctggga
tttcctgggcttaatggattccaaggaattgagggtgaaaagggtgacattggcctgcca
ggcccagatgttttcatcgatatagatggtgctgtgatctcagtgccaggtaatcctgga
gaccctggtgtacctggcctcccaggccttaaaggagatgaaggcatccagggcctgcgt
ggcccgtctggtgtccctggcttgccagcattatcaggtgtcctaggagccctagggcct
cagggatttccagggctgaagggggaccaaggaaacccaggccgtaccacaattggagca
gctggcctccctggcagagatggtttgccaggcccaccaggtccaccaggcccacctggt
ccagaatttgaggccgaaactctacacaacaaagagccagggttccctggtctccgagga
gaacaaggtccaaaaggaaacccaggcctcaaaggaataaaaggagactcaggtttctgt
gcttgtgacggtggtgttcccaacactggaccacccggggaaccaggcccacctggtcca
cggggcctcataggccttccaggccttaaaggagccagaggagatcgaggctctgggggt
gcacagggcccagcaggggctccaggctttgttgggtctccgggtccttcaggacccaaa
ggaaagaagggggaaccaattctcagtacaatctcaggaatgccaggggatcggggtgat
tctggctcccagggcttccctggtgtaataggaaaaccaggcaacgatggagtaccaggt
ctaccaggtctgccaggacttccgggtgatggtgggcagggcttcccaggtgaaaagggg
ttacctggacttcctggtgaaaaaggccatcctggtccacctggcctcccgggaattggg
ttaccaggactgcctggaccccgtgggcttcctggagataaaggcaaggatggattaccg
ggacaacaaggccctcctggatctaagggaatcaccctgccgtgtattattcctgggtca
tacggtccatcaggatttccaggcactcccggattcccaggccctaaagggtcccgaggc
ctccctgggaccccaggccagcctggatcaagtggaaataaaggaaagccagggagtcca
ggattggttcatcttcctgaattaccaggatttcctggacctcgtggggagaagggcttg
cctgggtttcctgggcttcctggaaaagatggcttgcctgggacgattggcagtccaggt
ttacctggttccaagggagccactggtgacatctttggtgctgaaaatggtgctccgggg
gaacaaggcctacaaggattaacaggcgacaaaggacttcttggagactctggccttcca
ggactcaagggtgtgtacgggaagcctggcttgctaggccccaaaggtgagcggggcagc
cctggaacaccaggaccggtgggacagccaggcaccccaggatctagtggtccatatggc
atcaagggcaaatctgggctcccaggagcaccaggctttccaggcacctcagggcatcct
ggaaagaaaggaacaagaggcgagaaaggccctcctggatcaattgtaaagaaagggctg
ccagggctaaaaggccttcctggaaatccaggcctaatagggctgaaaggaagcccaggc
tctccaggggtcgctgggttgccagccctctctggacccaagggagagaaggggtctgtt
ggattcgtaggttttccaggaataccaggtctgcctggtattcctggaacaagaggatta
aagggaattccaggatcaaccggaaaaatgggaccatctggacacgctggcactcctggt
gaaaagggagacagaggcaatccggggccagtcggaatacctggtccaagacgtccaatg
tcaaacctttggctcaaaggagacaaaggctctcaaggctcagccggatccgatggattt
ccagggccaagaggtgacaaaggagaggctggtcaacctgggccaccaggcctgcctgga
gctcctggcctcccaggcactatcaaaggagttagtggaaagccaggtccccctggcttc
atgggaatccggggcttacctggcctgaaggggtcctctgggataacaggtttcccagga
atgccaggagaaagtggttcacaaggtatcagagggtcgtctggactcccaggaacatct
ggtctcccaggcctgaaaggagacaacggccagacacttgaaatttccggtagcccagga
ccaaagggacaacctggtgaatctggttttaaaggcacaaaaggaagagatggaccaata
ggcaatataggcttccctggaaacaaaggtgaagatggaaaagttggtgtttctggagat
gttggccttcatggagctccagggtttccaggggttgccggcatgagaggagaaccagga
cttccaggctcttctggtcatcaaggggcaattgggcccctaggaccccccggattaata
ggacccaaaggcttccctggatttcctggtttacatggactgaatgggcttccgggcacc
aagggtacccatggcactccaggacctagtatcactggtgtgcctgggcctgctggtctc
cctggacccaaaggagaaaaaggatatccaggaattggcatcggagctcccgggaagccg
ggcctgagagggcaaaaaggtgatcgaggtttcccaggtctccagggccctgctggtctc
cccggtgccccaggcatctccttgccctcactcatagcaggacagcctggtgaccccggg
cgaccaggcctagatggagaacgaggccgcccaggcccccctggacctccaggtcccact
gggccatcctcgaatcaaggcaacaccggagaccctggcttccctggaattcctggacct
aaagggcctaagggagaccaaggaattccaggtttttctggccttcctggagagctagga
ctgaaagggatgagaggtgagcctggcttcatggggactccaggcaaggttgggccacct
ggagacccaggatttcccgggatgaaggggaaggcagggccaagaggctcttctggcccc
caaggtgctcctggacaaacaccaactgcagaagctgtccaggttcctcctggacccttg
ggtctaccagggatcgatggcatccctggcctcactggggaccctggggctcaaggccct
gtaggcctacaaggctccaaaggtttacctggcatccccggcaaagatggtcccagtggg
ctcccaggcccacctggggctcttggtgatcctggtctgcctggactgcaaggccctcca
ggatttgaaggagctccagggcagcaaggccccttcgggatgcctggaatgcctggccag
agcgcgagagtgggctacacgttggtaaagcacagccagtcggaacaggtgcccctgtgt
cccatcgggatgagccagctatgggtggggtacagcttactgttcgtggaggggcaagag
aaagcccataaccaggacctgggctttgctggctcctgtctgccccgcttcagcaccatg
cccttcatctactgcaacatcaacgaggtgtgccactatgccaggcgcaatgataaatcc
tactggctctccactactgcccctatccccatgatgcccgtcagccagacccagattccc
cagtacatcagccgctgctctgtgtgtgaggcaccctcgcaagccattgctgtgcacagc
caggacatcaccatcccgcagtgccccctgggctggcgcagcctctggattgggtactcc
ttcctcatgcacactgccgctggtgccgagggtggaggccagtccctggtctcacctggc
tcctgcctagaggactttcgggccacccctttcattgagtgcagtggtgcccgaggcacc
tgccactactttgcaaacaaatacagtttctggttgaccacagtggaggagaggcagcag
tttggggagttgcctgtgtctgaaacgctgaaagctgggcagctccacactcgagtcagt
cgctgccaggtgtgtatgaaaagcctgtag
DBGET
integrated database retrieval system
