Cercocebus atys (sooty mangabey): 105576004
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Entry
105576004 CDS
T07242
Symbol
SOX13
Name
(RefSeq) transcription factor SOX-13 isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
caty
Cercocebus atys (sooty mangabey)
Brite
KEGG Orthology (KO) [BR:
caty00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
caty03000
]
105576004 (SOX13)
Transcription factors [BR:
caty03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
105576004 (SOX13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
105576004
NCBI-ProteinID:
XP_011893820
Ensembl:
ENSCATG00000044597
LinkDB
All DBs
Position
Unknown
AA seq
625 aa
AA seq
DB search
MSMRSPISAQLALDGVGTMVNCTIKSEEKKEPCHEAPQGSATAAEPQPGDPARASQDSAD
PQAPAQVFRGSWDCSSPEGNGSPEPKRPGASEAASGSQEKLDFNRNLKEVVPAIEKLLSS
DWKERFLGRNSMEAKDVKGTQESLAEKELQLLVMIHQLSTLRDQLLTAHSEQKNMAAMLF
EKQQQQMELARQQQEQIAKQQQQLIQQQHKINLLQQQIQQVNMPYVMIPAFPPSHQPLPV
TPDSQLALPIQPIPCKPVEYPLQLLHSPPAPVVKRPGAMAAHHPLQEPSQPLNLTAKPKA
PELPNTSSSPSLKMSNCAPRPPSHGGPTRDLQSSPPSLPLGFLGEGDAVTKAIQDARQLL
HSHSGALEGSPNTPFRKDLISLDSSPAKERLEDGCVHPLEEAMLSCDMDGEGSGSRHFPE
SRNSSHIKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMTNQEKQPYYEEQ
ARLSRQHLEKYPDYKYKPRPKRTCIVEGKRLRVGEYKALMRTRRQDARQSYVIPPQAGQV
QMSSSDVLYPRAAGMPLAQPLVEHYVPRSLDPNMPVIVNTCSLREEGEGADDRHSVADGE
MYRYSEDEDSEGEEKSDGELVVLTD
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgaggagccccatctctgcccagctggccctggatggcgttggcaccatggtg
aactgcaccatcaagtcagaggagaagaaagagccttgccatgaggccccccagggctca
gccactgccgctgaacctcagcctggagacccagcccgggcctctcaggatagtgctgac
ccccaagctccagcccaggttttcaggggctcctgggactgtagctctccagagggtaat
gggtccccggaacccaagagaccaggagcgtcggaggctgcctctggaagccaggagaag
ctggacttcaaccgaaatttgaaagaagtggtgccagccatcgagaagctgttgtccagt
gactggaaggagaggtttctaggaaggaactctatggaagccaaagatgtcaaagggacc
caagagagcctagcagagaaggagctccagcttctggtcatgatccaccagctgtccacc
ctgcgggaccagctcctgacagcccactcggagcagaagaacatggctgccatgctgttt
gagaagcagcagcagcagatggagcttgcccggcagcagcaggagcagattgcaaagcag
cagcagcagctgattcagcagcagcataagatcaacctccttcagcagcagatccagcag
gttaacatgccttatgtcatgatcccagccttccccccaagccaccaacctctgcctgtc
acccccgactcccagctggccttacccattcagcccattccctgcaaaccagtggagtat
ccgctgcagctgctgcacagcccccctgccccagtggtgaagaggcctggggccatggcc
gcccaccaccccctgcaggagccctcccagcccctgaacctcacagccaagcccaaggct
cctgagctgcccaacacctccagctccccaagcctgaagatgagcaactgtgcgccccgc
ccccccagccatggaggccccacacgggacctgcagtccagccccccgagcctgcctctg
ggcttccttggtgaaggggatgctgtcaccaaagccatccaggatgctcggcagctgctg
cacagccacagtggggccttggaaggctcccccaacacccccttccgtaaggacctcatc
agcctggactcatccccagccaaggagcggctggaagacggctgcgtgcatccactggag
gaagccatgctgagctgtgacatggatggtgagggctcaggctcccgccacttccccgag
tcccgaaacagcagccacatcaagaggcccatgaacgccttcatggtgtgggccaaggat
gagcggaggaagatcctgcaagccttcccagacatgcacaactccagcatcagcaagatc
cttggatctcgctggaagtccatgaccaaccaggagaagcagccctactatgaggaacag
gcacggctgagccggcagcacctggagaagtatcctgactacaagtacaagccacggcct
aagcgcacctgcatcgtggagggcaagcggctgcgtgtgggcgagtacaaggccctgatg
aggacccggcgtcaggatgcccgccagagctatgtgatccccccgcaggctggccaggta
cagatgagctcctcggatgtcctgtaccctcgggcggcaggcatgccgctggcacagcca
ctggtggagcactatgtccctcgtagcctggaccccaacatgcctgtgatcgtcaacacc
tgcagcctccgagaggagggcgagggcgcagatgacaggcactcggtggctgatggcgag
atgtaccggtacagcgaggacgaggactcggagggcgaagagaagagcgatggggagttg
gtggtgctcacagactga
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