Cercocebus atys (sooty mangabey): 105577318
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Entry
105577318 CDS
T07242
Symbol
IGHMBP2
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-binding protein SMUBP-2
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
caty
Cercocebus atys (sooty mangabey)
Brite
KEGG Orthology (KO) [BR:
caty00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
caty03009
]
105577318 (IGHMBP2)
03012 Translation factors [BR:
caty03012
]
105577318 (IGHMBP2)
Enzymes [BR:
caty01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
105577318 (IGHMBP2)
5.6.2.5 RNA 5'-3' helicase
105577318 (IGHMBP2)
Ribosome biogenesis [BR:
caty03009
]
Eukaryotic type
Other ribosome biogenesis factors
105577318 (IGHMBP2)
Translation factors [BR:
caty03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
105577318 (IGHMBP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_11
AAA_12
SMUBP-2_HCS1_1B
R3H
AAA_30
AAA_19
ResIII
zf-AN1
Viral_helicase1
DEAD
nSTAND3
SLFN-g3_helicase
AAA_16
AAA_22
IstB_IS21
Helicase_RecD
UvrD-helicase
DnaB_C
AAA_25
Flavi_DEAD
PhoH
AAA
ABC_tran
Zot
NTPase_1
NPHP3_N
DAP3
UvrD_C_2
ATPase
Ada3
Motif
Other DBs
NCBI-GeneID:
105577318
NCBI-ProteinID:
XP_011896734
LinkDB
All DBs
Position
Unknown
AA seq
997 aa
AA seq
DB search
MASAAVESFVTKQLDLLELERDAEVEERRSWQENISLKELQSRGVCLLKLQVSSQRTGLY
GRLLVTFEPRRCGSVAALPSNSFTSGVCCGLYDAAMRAAAAPESXPGPQKSVTVAFDEXH
DFQLSLDXENSYRLLKLANDVTYRRLKKALIGSKEVSSGPASSLIEVLXGRSAPSPASEY
VRILNPLTFFNTSLDASQKEAVSFALSQKELAIIHGPPGTGKTTTVVEIILQAVKQGLKV
LCCAPSNIAVDNLVERLALCKQRILRLGHPARLLESIQQHSLDAVVARSDSAQIVADIRK
DIDQVFVKNKKTQDKREKSNFRNEVKLLRKELKGREEAAILESLTSANVVLATNTGASAD
GPLKLLPESHFDVVVIDECAQALEASCWIPLLKARKCILAGDHKQLPPTVVSHKXDPFAA
LRLVSLHMMERLAEEYGARAVRTLTVQYRMHQAIMRWASDTMYHGQLTAHPSVAGHLLRD
LPGVAATEETGVPLLLVDTAGCGLFELEEEDEQSKGNPGEVRLVSLHIQALVDAGVPARD
VAVVSPYNLQVDLLRQSLAHRHPELEIKSVDGFQGREKEAVILSFVRSNRKGEVGFLAED
RRINVAVTRARRHVAVICDSRTVNNHAFLKTLVEYFTQHGEVRTAFEYLDDIVPENYSHE
SSQGPSHAATKPQGPATSTRTGSQRQEGGRESVAAARQGRKKPAGKALAAEAPSQPSLNG
GSLEGVESQDGVDHFRAMIAEFMASDKTQLEFPPSLNSHDRLRVHQIAEEHGLRHDSSGE
GKRRFITVSKRAPPAPRPPAAPGPPAGTGGPAPLQPVPPSPARTEQPPREQRGPDQPDLR
LQRVRSAQGQPASKEQQASGQQKLPEKKKKKETKGHPAIDLPTEEDFEALVSAAIKADNT
CGFAKCTASVTALGQFCQLCSRRYCLSHHLPEIHGCGERARAHARQRISREGILYAGSGT
KDRSLDPAKRAQLQRRLDKKLSELSNQRTSRRKERGT
NT seq
2994 nt
NT seq
+upstream
nt +downstream
nt
atggcctcggcggctgtggagagcttcgtgaccaagcagctggacctgctggagctcgag
agagacgcggaggtggaggagcgcaggtcctggcaggagaacatctctctgaaagagctc
cagagccgaggcgtgtgtttgctgaagctccaggtatccagccagcgcactgggctgtat
ggacggctgctggtcacctttgagcccaggcgatgcgggtctgtggcagctcttcccagt
aacagctttacttctggtgtgtgctgtggcctgtacgatgctgctatgagggcagcagct
gcaccggaatcctgaccgggtccccagaagtcggtcacggtggcctttgatgagntccac
gatttccagttgagtttggacngagagaattcctacagactgttaaaacttgccaatgat
gtcacttacaggcgactgaaaaaagctctgattggctctaaagaagtatcttctggccca
gcctcctcactcatagaagtgctcnttggcagatctgctcccagtcctgccagtgaatac
gtaagaattttgaacccgctgacattcttcaacacctccttggatgcctcccagaaagaa
gcggtttcatttgcgctgtcgcagaaagaacttgccatcatccacggacctcctggcact
gggaaaaccacgactgtggttgagataattcttcaagctgtgaaacaaggcttaaaggtt
ctgtgctgcgccccctccaacatcgccgtggacaatctggtggagcgcctggctctgtgt
aagcagcggatcctgcgcctggggcaccccgcccgcctcctggagtccattcagcagcac
tccctggatgcggttgtagcgcggagcgacagcgcccagattgttgccgacatcaggaag
gacatcgaccaggtctttgtgaaaaacaaaaagacccaggataagagagaaaaaagtaat
tttcgaaatgaagttaagctgttaagaaaagaactgaaggggagggaagaagcagctata
ctcgagagcctcacttcggcaaacgtggtccttgcaacaaacacaggtgcgtctgccgac
ggccccctgaagttgctgcccgagagccacttcgacgtggtggtcattgatgagtgtgcc
caggcccttgaggcgagctgctggatccccctgctgaaggccagaaagtgcatcctggcg
ggcgatcacaagcaactgccccccaccgtagtctctcacaagtaagacccctttgccgca
ctccgcctcgtcagtttgcacatgatggagcgcctggccgaggagtatggcgcaagggcg
gtgcggacgctgacggtgcagtaccgcatgcaccaggccatcatgcgctgggcctctgac
accatgtaccacgggcagctcacggcccacccttctgtggcggggcacctgctgagggac
ctcccaggcgtggctgccacagaagagacgggtgtgcccctgctcctggtggacaccgcc
ggctgcgggctgtttgagctggaggaagaggacgaacagtcgaaagggaaccctggcgaa
gtccgcctcgtcagtttgcacatccaggctctggtggacgctggtgttccagcccgtgac
gttgccgtggtctcgccatacaacctccaggtggacctgctcagacagagcctcgcgcac
aggcaccccgagcttgaaatcaagtccgtcgacggcttccaaggccgagagaaggaggcc
gtgatactgtccttcgtcaggtccaacaggaaaggtgaagttggttttcttgctgaggac
cggaggatcaacgtggccgtcacccgcgcccggcgccacgtggcggtcatctgtgactcc
cgtactgtcaacaaccatgcatttttgaagaccctggtggagtatttcacacagcatggg
gaagtacgcacagcctttgagtatcttgatgatattgtcccagaaaactattcccatgag
agctcccagggtcccagccatgctgccacaaagccccagggccctgctacatccaccagg
actggaagccagcggcaggagggaggccgggagtctgtagcagctgccagacagggccgg
aagaagccagctggaaaggctctggctgctgaagccccatctcagcccagcctcaacgga
ggcagcctggagggagtggagagccaagacggcgtggaccacttccgggccatgattgcg
gagttcatggccagtgataagacgcagttggagtttccaccttccctcaattcccacgac
aggctgcgggtccaccaaatagccgaggagcacgggctgaggcacgacagttccggggaa
gggaagaggaggttcatcaccgtgagcaagagggccccgccggccccgcgacccccagca
gccccgggacccccagcagggaccggtggcccagcccctctccagccagtgccccccagc
cctgcgcggacggagcagcctcccagagagcagcgtggcccagaccagcctgatctgaga
ctgcagagggtcaggagtgcgcaggggcagcctgccagcaaggagcagcaggcctcgggg
cagcagaaacttccagaaaagaaaaagaaaaaagaaaccaaaggacatccggccatagat
ctgcccacggaggaggactttgaggccctggtttctgccgccattaaggctgataacacc
tgtggctttgccaagtgcacagccagcgtcacagccctgggccagttctgccagctctgt
agccgccgctactgcctcagccaccacctgcctgagatccatggctgtggtgagagggct
cgcgcccacgcccggcagagaatcagccgggaagggatcctctatgccggcagcgggacc
aaggacagatccctggacccagccaagagggcccagctgcagaggaggctggataagaag
ctgagcgagctcagcaaccagaggaccagccggaggaaggagagggggacgtga
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