Cercocebus atys (sooty mangabey): 105581320
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Entry
105581320 CDS
T07242
Symbol
PNLDC1
Name
(RefSeq) poly(A)-specific ribonuclease PARN-like domain-containing protein 1 isoform X1
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
caty
Cercocebus atys (sooty mangabey)
Pathway
caty03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
caty00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105581320 (PNLDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caty03019
]
105581320 (PNLDC1)
Enzymes [BR:
caty01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
105581320 (PNLDC1)
Messenger RNA biogenesis [BR:
caty03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
105581320 (PNLDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
105581320
NCBI-ProteinID:
XP_011905770
Ensembl:
ENSCATG00000033196
UniProt:
A0A2K5M0R9
LinkDB
All DBs
Position
Unknown
AA seq
531 aa
AA seq
DB search
MDVGADEFEESLPLLQELVQEADFVGLDIEFTGLRSNLSGPQQISLFDLPSEWYLKTRQS
IQQFTVCQIGLSVFSAIEGEANKYIAHSCNFFLFPTTFGILDSEFSFQASSVQFLNQYGF
NYNKFLKNGIPYMNEEQEKKIRHDILTGNWRVRSSPDKDQIKAVIDKVTRWLDLAKEGDW
MTLPGIAGFQAFEVQLVLRQALPDIWTVLKDEGVVVKKVSKQHRWYLQNTSCDQESCWKE
NILLSARGFSVFFQMLVKAQKPLVGHNMMMDLLHLHEKFFRPLPESYDQFKQNIHSLFPV
LIDTKNVTKDIWKEMNFPRVSNLSEVYEVLDSDLNPTKNSGPEIVHASRCEKYVKTKCPH
EAAYDAFLCGSVLLKVAHLLLQKIHGIDPVPESSFPQYLDVLAPYVNQVNLIRAGVPKIN
FSGPDYPSIRPPILILSIKRWPGVSEQQVYHKFQNLCKFDVRRLTRSQFLLLTNKFKDAR
NVLKEYRGHPTLCISLYRYWRHSPDVNCVLQVCGIVTAWALLAFIFGRSGP
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggacgtgggcgccgacgagttcgaggagagcctccctctgctgcaggagctcgtccag
gaggcggacttcgtgggtctggacatagagttcactggccttcgatctaacttgtctgga
ccccagcagatcagtctttttgatttgccatcggagtggtacctaaagacccgtcagagc
attcagcaatttacagtctgtcagattggattgtctgtgttttccgccattgaaggagaa
gcaaacaagtatatagcccattcgtgtaacttttttctcttccccacaacgtttgggatt
ttggactcagaattctctttccaggcttccagtgttcagtttttgaatcagtatggcttc
aactataacaagtttctcaaaaacggaatcccatatatgaatgaagaacaggagaagaaa
attcgacacgatatcctgactgggaactggagagttcgcagctctccggataaagaccaa
atcaaggcggtgattgacaaagtgacacggtggctggacctggccaaggaaggtgactgg
atgactcttcctgggatcgctggcttccaggcctttgaggtccaactggtgctgaggcag
gccctccccgacatctggacggtgctgaaagatgagggggtggtagtgaagaaagtgagt
aaacaacatcgttggtatcttcagaacacctcttgtgaccaagagagctgttggaaggaa
aatattcttctctctgcaaggggtttttctgtctttttccaaatgctggtgaaagcccag
aagcccttagtgggacataatatgatgatggacctgctgcacctccatgagaagttcttc
agacccctcccagaaagctacgatcaatttaagcagaatatccacagcctatttcctgtt
ctcattgataccaagaatgtaacaaaggatatctggaaggagatgaatttcccgagggtg
tcgaatctttccgaagtctatgaagtcctggacagtgacttgaatcccaccaagaattct
ggaccagagattgttcacgcaagcaggtgtgagaaatacgttaagacaaagtgcccccac
gaagctgcgtatgatgccttcctctgtgggtcagttcttttgaaagtggcacacttgctt
ctacagaagatacatggcatcgaccccgtgcccgagtcgtcctttcctcagtacctcgac
gtgctggctccttacgtgaaccaagtgaacctcatccgcgcgggggtcccaaagatcaat
ttttctggtccagattatcccagtatccgacctcccatcctcatcctcagcatcaaaagg
tggcccggggtcagcgagcagcaagtctatcataagtttcagaatctctgcaagtttgat
gtcaggcgactcacaagaagccagttcttactcctgaccaataagtttaaggacgcgcgg
aacgtcctgaaggagtaccggggccacccgaccctgtgcatctccctgtaccgctactgg
aggcactccccagacgtcaactgcgtgctccaagtctgtggcatagtgactgcctgggcc
cttctcgcgttcatcttcggaagatctggtccctga
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