Cercocebus atys (sooty mangabey): 105584848
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Entry
105584848 CDS
T07242
Symbol
RFC1
Name
(RefSeq) LOW QUALITY PROTEIN: replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
caty
Cercocebus atys (sooty mangabey)
Pathway
caty03030
DNA replication
caty03410
Base excision repair
caty03420
Nucleotide excision repair
caty03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
caty00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
105584848 (RFC1)
03410 Base excision repair
105584848 (RFC1)
03420 Nucleotide excision repair
105584848 (RFC1)
03430 Mismatch repair
105584848 (RFC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
caty03032
]
105584848 (RFC1)
03400 DNA repair and recombination proteins [BR:
caty03400
]
105584848 (RFC1)
DNA replication proteins [BR:
caty03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
105584848 (RFC1)
DNA repair and recombination proteins [BR:
caty03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
105584848 (RFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
AAA_lid_RFC1
BRCT
AAA
PTCB-BRCT
Rad17
AAA_22
RuvB_N
AAA_16
AAA_5
AAA_14
BRCT_2
AAA_33
AAA_17
Zeta_toxin
nSTAND3
AAA_30
AAA_18
RNA_helicase
Nexin_C
NTPase_1
AAA_7
NPHP3_N
AAA_19
Motif
Other DBs
NCBI-GeneID:
105584848
NCBI-ProteinID:
XP_011913305
Ensembl:
ENSCATG00000015035
LinkDB
All DBs
Position
Unknown
AA seq
1008 aa
AA seq
DB search
MCKKAASKSKENGRSTNSHLGTSNMKKNEENTKTKNKPLSPIKLTPTSVLDYFGTGSVQR
SNKKMVASKRKELSQNTNESGLNDEAIAKQLQLDEDAELERQLHEDEEFARTLAMLDEEP
KTKKARKDTEEGETFSSVQANLSKAEKRKYPHKVKTEQFSDERKSYSPRKQLNMKVPKEP
QQHSKSSADKIGEVSSPKASSKLAIMKRKEESTYKEIEPVASKRKENAVELKGETKNSKK
TKSSPAKKESISPEDSEKKRTNYQAYRSYLNREGPKALGSKEIPKGAENCLEGLIFVITG
VLESIERDEAKSLIERYGGKVTGNVSKKTNYLVMGRDSGQSKSDKAAALGTKIIDEDGLL
NLIRTMPGKKSKYEIAVETEMKKESKLERTPQKNVQGKRKISPSKKESESKKSKPTSKRD
SLAKTIKKETDVFWRGLDFKEQVAEETSGDSKARNLADDSSENKVENLLWVDKYKPTSLK
TVIGQQGDQSCANKLLRWLRNWHKSSSEDKKHAAKFGKFSGKDDGSSFKAALLSGPPGVG
KTTTASLVCQELGYSYVELNASDTRSKSSLKAIVAESLSNTSIKGFYSNGAASSVSTKHA
LIMDEVDGMAGNEDRGGIQELIGLIKHTKIPIICMCNDRNHPKIRSLVHYCFDLRFQRPR
VEQIKGAMMSIAFKEGLKIPPPAMNEIILGANQDIRQVLHNLSMWCARSKALTYDQAKAD
SHRAKKDIKMGPFDVARKVFAAGEETAHMSLMDKSDLFFHDYSIAPLFVQENYIHVKPVA
AGGDMKKHLMLLSRAADSICDGDLVDSQIRSKQNWSLLPTQAIYASVLPGELMRGFMTQF
PTFPSWLGKHSSTGKHDRIVQDLALHMSLRTYSSKRTVNMDYLSHLRDALVQPLTSQGVD
GVQDVVALMDTYYLMKEDFENIMEISSWGGKPSPFSKLDPKVKAAFTRAYNKEAHLTPYS
LQAIKASRHSTSPSLDSEYNEELNEDDSQSDEKDQDAIETDAMIKVVF
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atgtgtaagaaggcggcctctaaatcaaaagagaatggaagatctacaaatagtcatctt
ggaacatcaaacatgaaaaagaatgaagaaaacactaagaccaagaataagcctttatca
ccaataaaacttacacccacatcagtgcttgattattttggaactggaagtgtccaaaga
tctaataagaagatggtggcaagcaaaagaaaagagctttcacaaaatacaaatgagtct
ggattaaatgatgaagccatcgccaagcaattacagcttgatgaagatgcggagctggag
aggcagttgcatgaagatgaagagtttgccagaacattagccatgttggatgaagaaccc
aagaccaaaaaggctcgaaaggacacagaagagggagaaacgttttcatctgtccaagcc
aatttaagtaaagcagaaaaacgtaaatatcctcataaagtaaaaacagaacaattttca
gatgaaagaaagagctacagtcctaggaagcaactaaatatgaaagttccaaaagaacct
cagcaacattccaagtcatcagctgacaaaataggagaagtctcttctcccaaggccagt
tctaagctggcaattatgaaaagaaaagaagagagcacttataaagaaatagagccggtg
gcctcaaaaagaaaagaaaatgccgttgaattgaaaggagagacaaaaaactccaagaaa
accaaaagttctccagctaaaaaagagtctataagtcctgaagattctgaaaagaaacgc
actaattatcaagcttatcgaagctacttaaatcgagaaggtcccaaggctctgggctcc
aaagaaataccaaagggagctgaaaattgcttggaaggccttatatttgtaatcacaggc
gtgctggagtctattgaacgagatgaggccaagtctctaattgaacgttatgggggaaaa
gtgacaggaaatgtcagcaagaaaacaaattaccttgtcatgggtcgtgatagtggacag
tccaagagtgataaggccgcagccttggggacaaaaattattgatgaagatggcctgttg
aatctgattcgaactatgccaggcaagaaatccaagtatgaaatagcagttgaaactgag
atgaagaaagagtccaaactggagagaacaccccaaaaaaatgttcaaggcaaaagaaaa
attagtccatctaaaaaggaatcggaatctaaaaagagcaagccgacttccaaaagggac
agtttggcaaagacaataaaaaaggaaacagatgtgttttggagaggcctggatttcaag
gagcaggtggccgaggaaacaagtggtgacagcaaggctaggaatttggctgatgacagc
agtgaaaacaaagtggaaaatttgctctgggtggataaatataagccaacctcgctcaag
accgtaattggacagcaaggtgaccagagctgtgccaacaaactcctacgctggctccga
aactggcacaagagttcttctgaagataaaaaacacgcagcaaagtttggtaaattttcc
ggcaaagatgatggctctagttttaaagcagcgttgctgtcaggccctcctggtgttggc
aaaaccaccacagcttccctggtgtgtcaggaattgggatacagctacgtggaactgaat
gcaagtgacacccggagtaagagcagtttgaaggcgattgttgctgagtcactgagcaat
accagcatcaaaggcttttattcaaatggagcagcctcttcagtaagcacgaaacatgct
ctcatcatggatgaagtagatggcatggcaggcaatgaggataggggaggaattcaggaa
ttaattggcctgataaaacatactaaaattcccattatttgtatgtgcaatgatagaaat
catcccaagattcgctctctggttcattattgttttgatcttcgttttcaaagacctcgg
gttgaacagattaagggtgctatgatgtctattgcatttaaagaaggtttaaagattccc
cctccagcaatgaatgaaataattttgggagccaatcaagatatcagacaggttttacat
aatctgagtatgtggtgtgcacgaagtaaagcattaacctatgaccaggccaaagctgat
tctcacagagccaaaaaggatatcaaaatgggcccatttgatgttgcccggaaggtgttt
gcagctggagaggagactgctcacatgtcacttatggacaagtcagatctcttttttcat
gattattcaatagcacccctctttgtccaggaaaattacatacatgtgaagcctgtagca
gcagggggcgacatgaaaaagcacttgatgcttttaagcagagcagcagacagcatatgt
gatggtgacttagtggacagccagatccggagtaagcaaaactggagtcttctgcctacg
caggccatttatgccagtgttcttcctggagagttgatgagagggttcatgacccagttt
cccaccttcccgagctggctggggaagcactcgtctacaggcaaacacgatcgtattgtt
caggacctggccttgcatatgagtctcagaacttactccagcaaaaggactgtaaacatg
gattatctgtcacatctaagggatgcacttgtacagcccttgacctcacaaggagtcgac
ggggtacaggatgttgttgcacttatggacacatattatttgatgaaagaagactttgag
aatatcatggaaattagcagctggggtggcaaacctagtcccttttcaaagctggatccc
aaggtgaaagcagccttcacaagagcttacaataaggaagcccaccttactccatattca
cttcaagctataaaggcatctagacacagcacaagcccatccctggattcggaatacaat
gaagagttaaatgaagatgactctcaatctgatgagaaagaccaagatgctatagaaact
gatgccatgatcaaggtagtattttaa
DBGET
integrated database retrieval system
