Cercocebus atys (sooty mangabey): 105585457
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Entry
105585457 CDS
T07242
Symbol
EDC4
Name
(RefSeq) enhancer of mRNA-decapping protein 4 isoform X1
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
caty
Cercocebus atys (sooty mangabey)
Pathway
caty03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
caty00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105585457 (EDC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caty03019
]
105585457 (EDC4)
Messenger RNA biogenesis [BR:
caty03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105585457 (EDC4)
mRNA degradation factors
5'-3' decay
Decapping complex
105585457 (EDC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
Beta-prop_EDC4L
Beta-prop_TEP1_2nd
DUF445
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_HPS5
WDR55
EIF3I
Motif
Other DBs
NCBI-GeneID:
105585457
NCBI-ProteinID:
XP_011914609
Ensembl:
ENSCATG00000044352
LinkDB
All DBs
Position
Unknown
AA seq
1437 aa
AA seq
DB search
MASCASIDIEDATQHLRDILKLDRPAGGPSAESPRPSSAYNGDLNGLLVPDPLCSGDGTS
TNKTGLRTMPPINLQEKQVICLSGDDSSTCIGILAKEVEIVASSDSSISSKARGSNKVKI
QPVAKYDWEQKYYYGNLIAVSNSFLAYAIRAANNGSAMVRVISVSTSERTLLKGFTGSVA
DLAFAHLNSPQLACLDEAGNLFVWRLALVNGKIQEEILVHIRQPEGTPLNHFRRIIWCPF
IPEESEDCCEESSPTVALLHEDRAEVWDLDMLRSSHSTWPVDVSQIKQGFIVVKGHSTCL
SEGALSPDGTVLATASHDGYVKFWQIYIEGQDEPRCLHEWKPHDGRPLSCLLFCDNHKKQ
DPDVPFWRFLITGADQNRELKMWCTVSWTCLQTIRFSPDIFSSVSVPPSLKVCLDLSAEY
LILSDVQRKVLYVMELLQNQEEGHACFSSISEFLLTHPVLSFGIQVVSRCRLRHTEVLPA
EEENDSLGADGTHGAGAMESAAGVLIKLFCVHTKALQDVQIRFQPQLNPDVVAPLPTHTA
HEDFTFGESRPELGSEGLGSATHGSQPDLRRIVELPAPANFLSLSSETKPKLMTPDAFMT
PSASLQQITASPSSSSSGSSSSSSSSSSSLTAVSAMSSTSAVDPSLTRPPEELTLSPKLQ
LDGSLTMSSSGSLQASPRGLLPGLLPAPADKLTPKGPGQVPTAASALSLELQEVEPLGLP
QASPSRTRSPDVISSASTALSQDIPEIASEALSRGFGSSAPEGLEPDSMASAASALHLLS
PRPRPGPELGPQLGLDGGPGDGDRHSTPSLLEAALTQEASTPDSQVWPTAPDITRETCST
LAESPRNGLQEKHKSLAFHRPPYHLLQQRDSQDASAEQSDHDDEVASLASASGGFGTKVP
APRLPAKDWKTKGSPRTSPKLKRKSKKDDGDAAMGSRLTEHQVPEPPEDWPALIWQQQRE
LAELRHSQEELLQRLCTQLEGLQSTVTGHVERALETRHEQERILETGNTTWHRDGGSILG
LGRSTRPAPGLFLSYGAERRLERALAEGQQRGGQLQEQLTQQLSQALSSAVAGRLERSIR
DEIKKTVPPCVSRSLEPMAGQLSNSVATKLTAVEGSMKENISKLLKSKNLTDAIARAAAD
TLQGPMQAAYREAFQSVVLPAFEKSCQAMFQQINDSFRLGTQEYLQQLESHMKSRKAREQ
EAREPVLAQLRGLVSTLQSATEQMAATVASSVRAEVQHQLHVAVGSLQESILAQVQRIVK
GEVSVALKEQQAAVTSSIMQAMRSAAGTPVPSAHLDCQAQQAHILQLLQQGHLNQAFQQA
LTAADLNLVLYVCETVDPAQVFGQPPCPLSQPVLLSLIQQLASDLGTRTDLKLSYLEEAV
MHLDHSDPITRDHMGSVMAQVRQKLYQFLQAEPHNSLGKAARRLSLMLHGLVTPSLP
NT seq
4314 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctgcgcgagcatcgatatcgaggacgccacgcagcacctgcgggacatcctc
aagctggaccgacccgcgggcggccccagtgcagagagcccacggccatccagtgcctac
aatggggacctcaatgggcttctggtcccagacccgctctgctcaggtgatggtacatca
acaaacaagactggtcttcggaccatgccacccattaacctgcaagagaagcaggtcatc
tgtctctcaggagatgatagctccacctgcattgggattttggccaaggaggtggagatt
gtggccagcagtgactctagcatttcaagcaaggcccggggaagcaacaaggtgaaaatt
cagcctgtcgccaagtatgactgggagcagaagtactactatggcaacctgattgctgta
tctaactccttcttggcctatgccattcgggctgccaacaatggctccgccatggtgcgg
gtgatcagtgtcagcacttcggagcggaccttgctcaagggcttcacaggcagtgtggct
gatctggcttttgcacacctcaactctccacagctggcctgcctggatgaggcaggcaac
ctgttcgtgtggcgcttggctctggttaatggcaaaattcaagaagagatcttggtccat
atccggcagccagagggcacgccactgaaccactttcgcaggatcatctggtgccccttc
atccctgaggagagcgaggactgctgtgaggagagcagcccaacggtggccctgctgcat
gaagaccgggctgaggtgtgggacctggacatgctccgctccagccacagcacttggcct
gtggatgtcagccagatcaagcagggcttcattgtggtaaaaggtcatagcacgtgcctc
agtgaaggagccctctcccctgatgggactgtgctggctactgcgagccatgatggctat
gtcaagttctggcagatctacattgaggggcaagatgagccaaggtgtctgcacgagtgg
aagcctcatgatgggcggcccctctcctgcctcctgttctgtgacaaccataagaaacaa
gaccctgatgtccctttctggaggttccttattactggtgctgaccagaaccgagagcta
aagatgtggtgtacggtgtcctggacctgcctgcagactattcgcttctccccagatatc
ttcagctcagtgagtgtgccccctagcctcaaggtttgcttggacctctcagcagaatac
ctgattctcagtgatgtgcaacggaaggtcctctatgtgatggagctgctgcagaaccag
gaggagggccatgcctgcttcagctccatctcggagttcctgctcacccaccctgtgctg
agcttcggtatccaggttgtgagtcgctgccggctacggcacactgaggtgctgcctgcc
gaagaggaaaatgacagcctgggtgctgatggtacccatggagctggtgccatggagtct
gcagctggtgtgctcatcaagctcttttgtgtgcatactaaggcactgcaagatgtgcag
atccgcttccagccacagctgaaccctgatgtggtggccccactccccacccacactgcc
cacgaggactttacatttggagagtctcggcccgaactgggctccgagggcctggggtca
gccactcacggctcccagcctgacctccgacgaatcgtggagctgcctgcacctgccaac
ttcctcagtctgagcagtgagaccaagcccaagttgatgacacctgacgccttcatgaca
cctagcgcctccttgcagcagatcactgcctctcccagcagcagcagcagtggtagcagc
agcagcagcagcagcagcagcagctcccttacagctgtgtctgccatgagcagcacctca
gctgtggacccctccttgaccaggccacctgaggagctgactttgagccccaagctgcag
ctggatggcagcctgacaatgagcagcagcggcagcctgcaggcaagcccacgcggcctc
ctgcccggcctgctcccagccccagccgacaaactgactcccaaggggccgggccaggtg
cctactgccgcctctgcactgtccctggagctgcaggaagtggagcccctggggctaccc
caagcctcccctagccgcacccgttcccctgatgtcatctcctcagcttccactgccctg
tcccaggacatccctgagattgcatctgaggccctgtcccgtggttttggctcctctgca
ccagagggccttgagccagacagtatggcttcagccgcctcagcactgcacctactgtcc
ccacggccccggccagggcccgagctcggcccccagcttggccttgatggaggccctggg
gacggagatcggcatagtaccccctccctcctggaggcagccttgacccaggaggcctcg
actcctgacagtcaggtttggcccacagcacctgacattactcgtgagacctgcagcacc
ctggcagaaagccccaggaatggccttcaggaaaagcacaagagcctggccttccaccga
ccaccatatcacctgctgcagcaacgtgacagtcaggatgccagtgctgagcaaagtgac
catgatgatgaggtggccagccttgcctctgcttcaggaggctttggcaccaaagttcct
gctccacggctgcctgccaaggactggaagaccaagggatcccctcgaacctcacccaag
ctcaaaaggaaaagcaagaaggatgatggggatgcagccatgggatcccggctcacagag
caccaggtgccagagccccctgaggactggccagccctaatttggcaacagcagagagag
ctggcagagctgcggcacagccaagaagagctgctgcagcgtctgtgtacccaactcgaa
ggcctgcagagcacagttacaggccacgtagaacgtgcccttgagacccggcacgagcag
gagcgtatccttgagactggtaacacaacatggcatagggatgggggcagcattcttggc
ctgggaaggagtacacgacctgctccaggcctgttccttagctacggcgcagagcggcgg
ctggaacgagcactggctgaggggcagcagcggggagggcagctgcaggagcagctgaca
caacagttgtcccaagcactgtcttcagctgtagctgggcggctagagcgcagcatacgg
gatgagatcaagaagacagtccctccatgtgtctcaaggagtctggagcctatggcaggc
caactgagcaactcagtggctaccaagctcacagctgtggagggcagcatgaaagagaac
atctccaagctgctcaagtccaagaacttgactgatgccatcgcccgagcagctgcagac
acattacaggggccgatgcaggcagcctaccgggaagccttccagagtgtggtgctgccg
gcctttgagaagagctgccaggccatgttccagcaaatcaatgatagcttccgactgggg
acacaggaatacttgcagcagctagaaagccacatgaagagccggaaggcacgggaacag
gaggccagggagcctgtgctggcccagctgcggggcctggtcagcacactgcagagtgcc
actgagcagatggcagccaccgtggccagcagtgttcgggctgaggtgcagcaccagctg
catgtggctgtgggcagccttcaggagtccattttagcacaggtacagcgcatcgttaag
ggtgaggtgagtgtggcactcaaggagcagcaggccgccgtcacctccagcatcatgcag
gccatgcgctcagctgctggcacacctgtcccctctgcccaccttgactgccaggcccag
caagcccatatcctgcagctgctgcagcagggccacctcaatcaggccttccagcaggca
ctgacagctgctgacctgaacctggtgctgtatgtgtgtgaaactgtagacccagcccag
gtttttgggcagccaccctgcccactctctcagcctgtgctcctttccctcatccagcag
ctggcatctgaccttggcactcgaactgacctcaagctcagctacctggaagaggccgtg
atgcatctggaccacagtgaccccatcactcgggaccacatgggctccgttatggcccag
gtgcgccaaaagctttatcagttcctgcaggctgagccacacaactcacttggcaaagcg
gcccggcgtctcagcctcatgctgcatggtcttgtgacccccagcctcccttag
DBGET
integrated database retrieval system
