Cercocebus atys (sooty mangabey): 105586970
Help
Entry
105586970 CDS
T07242
Symbol
COL4A4
Name
(RefSeq) collagen alpha-4(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
caty
Cercocebus atys (sooty mangabey)
Pathway
caty04151
PI3K-Akt signaling pathway
caty04510
Focal adhesion
caty04512
ECM-receptor interaction
caty04820
Cytoskeleton in muscle cells
caty04926
Relaxin signaling pathway
caty04933
AGE-RAGE signaling pathway in diabetic complications
caty04974
Protein digestion and absorption
caty05146
Amoebiasis
caty05165
Human papillomavirus infection
caty05200
Pathways in cancer
caty05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
caty00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
105586970 (COL4A4)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
105586970 (COL4A4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
105586970 (COL4A4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
105586970 (COL4A4)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
105586970 (COL4A4)
09154 Digestive system
04974 Protein digestion and absorption
105586970 (COL4A4)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
105586970 (COL4A4)
09162 Cancer: specific types
05222 Small cell lung cancer
105586970 (COL4A4)
09172 Infectious disease: viral
05165 Human papillomavirus infection
105586970 (COL4A4)
09174 Infectious disease: parasitic
05146 Amoebiasis
105586970 (COL4A4)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
105586970 (COL4A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
caty04147
]
105586970 (COL4A4)
00536 Glycosaminoglycan binding proteins [BR:
caty00536
]
105586970 (COL4A4)
Exosome [BR:
caty04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
105586970 (COL4A4)
Glycosaminoglycan binding proteins [BR:
caty00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
105586970 (COL4A4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
105586970
NCBI-ProteinID:
XP_011918055
Ensembl:
ENSCATG00000024575
UniProt:
A0A2K5L5H5
LinkDB
All DBs
Position
Unknown
AA seq
1692 aa
AA seq
DB search
MSSLHVVLMRCSFRLTKSLATGPWSLILILFSVQYVYGSGKKYVGPCGGRDCSVCHCVPE
KGSRGPPGPPGPQGPIGPLGAPGPTGLSGEKGMTGDRGPPGTAGDKGDKGPTGVPGFPGL
DGIPGHPGPPGPRGKPGKCGYNGSRGDPGFPGGRGALGPGGPPGHPGEKGEKGNSVFILG
AVKGIQGDRGDPGLPGLPGSWGAGGPAGPAGYPGEPGLVGPPGQPGRPGLKGNPGVGVKG
QMGDPGEVGQRGSPGPTLLVEPPDFCLYKGEKGIKGIPGMIGLPGPPGRKGESGIGAKGE
KGIPGFPGPWGDPGSYGSPGFPGLKGELGLVGDPGLFGFLGPKGDPGDRGHPGPPGVLVT
PPLPLKGPPGDPGFRGRYGETGDVGPPGPPGLLGRPGEACAGMIGPPGPQGFPGLPGLPG
EAGIPGRPDSATGKPGKPGSPGLPGAPGLQGLPGSSVTYCSVGNPGPQGIKGKVGPPGGR
GSKGEKGNEGLCACEPGPMGPPGPPGLPGRQGSKGDLGLPGWLGAKGDPGPPGAEGPPGL
PGKPGAPGPPGNKGAKGDVVISRVKGHKGERGPDGPPGFPGQPGSHGLDGHAGEKGDPGL
PGDHEDAIPGGKGFPGPLGPPGKAGPVGPPGLGFPGPPGERGHPGVPGRPGVRGPDGLKG
QKGDTVSCNVTYPGRQGPPGFDGLPGPKGFPGPQGAPGLSGSDGHKGRPGTPGTSEIPGP
PGFRGDIGDPGFGGEKGSSPVGPPGPPGSPGVNGQKGIPGDPAFGHLGPPGKRGLSGVPG
IKGPRGDPGYPGAEGPAGIPGFPGLKGPKGREGHAGFPGVPGPPGHSCERGAPGIPGQPG
LPGDPGSPGAPGGKGQPGDVGPPGPAGMKGLPGLPGRPGAHGPPGLPGIPGPFGDDGLPG
PPGPKGPRGLPGFPGFPGERGKPGAEGCPGTKGEPGEKGMSGYPGDRGVRGAKGALGPPG
DEGEMAIISKKGKPGEPGPPGDDGFPGERGDKGTPGMQGRRGEPGRYGPPGFHRGEPGEK
GQPGPPGPPGPPGSTGLRGFIGFPGLPGDQGEPGSPGPPGFSGIDGARGPKGNKGDPAPA
SHFGPPGPKGEPGSSGCPGHFGASGEQGLPGVQGPRGSPGRPGPPGSSGPPGCPGDRGMP
GLRGQPGEMGDPGPRGLQGDPGIPGPPGIKGPSGSPGLNGLHGLKGQKGTKGASGLHDVG
PPGPVGMPGLKGERGDPGSPGISPPGPCGEKGLPGPPGRSGPPGPAGATGRAPKDIPDPG
PSGDQGPPGPDGPRGAPGPPGLPGSVDLLRGEPGDCGLPGPPGLPGPPGPPGYKGFPGCD
GKDGQKGPMGFPGPQGPHGFPGPPGEKGLPGPPGRKGPTGLPGPRGEPGPPADADDCPRI
PGLPGVPGLRGPEGAMGLPGMRGPPGPGCKGEPGLDGRRGMDGIPGSPGPPGRKGDTGED
GYPGGPGPPGPTGDPGPKGFGAGYLSGFLLVLHSQTDQEPTCPLGMPRLWTGYSLLYLEG
QEKAHNQDLGLAGSCLPVFSTLPFAYCNIHQVCHYAQRNDRSYWLASAAPLPMMPLSEEA
IRPYVSRCAVCEAPAQAVAVHSQDQSIPPCPQTWRSLWIGYSFLMHTGAGDQGGGQALMS
PGSCLEDFRAAPFLECQGRQGTCHFFANEYSFWLTTVKADLQFSSAPAPDTLKESQAQRQ
KISRCQVCMKYS
NT seq
5079 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtctctgcacgtagtactaatgaggtgctccttcagattgaccaagtcattggcc
acaggtccctggtcacttatactcattctcttttctgtacaatacgtatatgggagtgga
aagaaatacgttggtccttgtggaggaagagattgctctgtttgccactgtgttcctgaa
aaggggtctcggggtccaccaggaccaccggggccacagggtccaattgggcccctggga
gccccaggacccactgggctttcaggagagaaaggaatgacaggggaccgcggccctcct
ggaacagcaggggacaaaggagataagggcccaactggtgttcctggatttccaggttta
gatggcatacctgggcacccagggcctcctggacccagaggcaaacctggtaagtgtggc
tacaatggctcaagaggtgacccagggtttccaggaggaagaggagctcttggtccagga
ggccccccaggccatcctggggaaaagggagaaaaaggaaattcagtgttcattttaggt
gccgttaaaggtattcagggagacagaggcgacccaggactgcccggcttaccaggatct
tggggtgcaggaggaccggcgggccccgcaggatatcctggagagccagggttagtggga
cctccgggccaaccagggcgtccaggtttgaagggaaatcccggtgtgggagtaaagggg
caaatgggagacccgggtgaggttggtcagcgaggttctcctggacccaccctgttggta
gagccacctgacttttgtctctataaaggagaaaagggtataaaaggaattcctggaatg
attggactgccaggaccaccaggacgcaagggagaatctggtattggggcaaaaggagaa
aaaggcattcctggatttccagggccttggggggatcctggttcctatggatctccaggt
ttcccaggattaaagggagaactaggactggttggagatcctgggctatttggatttctt
ggcccaaagggggatcctggagaccgagggcacccaggaccaccaggtgttttggtgact
ccacctcttccactcaaaggcccaccaggggacccaggattccgtggccgttatggagaa
acaggggatgttggaccacctggtcccccaggtctcttgggcagaccaggggaagcctgt
gcaggcatgataggaccccctgggccacaaggatttcctggtcttcctgggcttccagga
gaagctggtattcctgggagacctgattctgctacaggaaaaccagggaagccaggatca
cctggcttgcctggagcaccaggcctgcagggcctcccaggatcaagtgtgacatactgt
agtgttgggaaccctggaccacaaggaataaaaggcaaagtgggtcccccaggaggaaga
ggctcaaaaggagaaaaaggaaatgaaggactctgtgcctgtgagcctggtcccatgggc
ccccccggacctccaggacttcccgggaggcaggggagtaagggagacttggggctccct
ggctggcttggagcaaaaggtgacccaggacctcctggtgctgaaggacctccagggcta
ccaggaaagcctggtgcccccggaccacccggcaacaaaggggcgaagggtgacgtggtc
atatcaagagttaaagggcacaaaggagaaagaggtcctgatgggcccccaggatttcca
gggcaaccaggatcgcatggtctggatggacatgctggagaaaaaggggatccaggactc
ccaggggatcatgaagatgcgattccaggtggtaaaggatttcctggacctctgggtccc
ccaggcaaagcaggacctgtggggcccccgggactgggatttcctggtccaccaggagag
cgaggccacccaggagttccaggccgcccaggtgtgaggggccctgatggcttgaagggt
cagaaaggtgacacagtttcttgcaatgtgacctatcctgggaggcaaggccctccaggt
tttgacggacttccaggtccaaagggatttccaggtccccaaggtgcccctggcctgagt
ggttcagatgggcataaaggcagacctggcacaccaggaacatcggaaataccaggtcca
cctggttttcgtggtgacataggcgatccgggttttggaggtgaaaaggggtcctcccct
gttgggcccccaggccctcctgggtcaccaggagtgaatggtcagaaaggaatcccggga
gaccctgcatttggtcacctgggacccccgggaaagaggggtctttcaggagtgccaggg
ataaaaggacccagaggtgatccgggatatccaggggctgaagggccagctggcattcct
ggattcccaggtctcaaaggtcccaaaggcagagagggccatgctgggtttccaggtgtc
ccaggtccacctggccattcctgtgaaagaggtgctccaggaataccagggcaaccggga
ctccctggggatccaggtagcccaggtgctccaggtgggaaaggacagccgggagatgtg
gggcctcctgggccagctggaatgaaaggtctccctggactcccaggacggcctggggca
cacggtcccccgggcctcccaggaatcccaggtccctttggggatgatgggctacctggt
cctccaggtccaaaaggaccccgggggctgcctggtttcccaggttttcccggagaaaga
ggaaagcctggtgcagagggatgtcctggcacaaagggagaacccggagagaagggcatg
tctggctatcccggagaccggggagtgagaggggccaaaggagccctaggacctcctgga
gatgaaggagaaatggctatcatttccaaaaagggaaaacccggggaacctggacctcct
ggagatgatggattcccaggagaaagaggtgataaaggaacacccgggatgcaagggaga
agaggagagccgggaagatatggaccacctggatttcacagaggggaacctggtgagaaa
ggtcagccagggcctcctggacccccaggccctccaggctcaactggtctaagagggttc
attggttttccaggacttccaggtgaccagggtgagccaggttctccaggtccccctgga
ttttcaggaatcgatggagcaagaggacctaaaggaaacaaaggtgaccctgcccctgcc
agtcactttggtccacctggtccaaagggtgagccaggtagctctggatgtccagggcat
tttggagcatccggagagcagggcttgcctggcgttcaagggcccagaggatcacctgga
cggccaggaccacctggctcctctggaccaccagggtgcccaggtgatcgggggatgcct
gggctgaggggacagccaggagaaatgggagaccctgggccaagaggcctccagggggat
ccagggataccaggtcctccaggaataaaaggtccctccggatcacctggcctgaacggc
ttacatggattgaagggtcagaaaggaaccaaaggtgcttcaggtttgcatgatgtgggg
ccacctggtccagtgggaatgcctgggctaaaaggggagagaggagatcctgggagccca
ggaatctctcctccaggtccttgtggagaaaaaggtctcccaggtcccccagggagatca
ggaccacctggtcctgcgggtgccacaggaagagcgcctaaggacattcctgacccgggt
ccatctggagatcagggacctcctggtcctgatggcccaagaggagcacctgggcctcca
ggcctccctgggagtgttgacctcctgagaggggagccaggtgactgtggtctaccaggg
ccaccaggtctccccggcccaccaggccctccaggatacaaaggctttccaggatgtgat
ggaaaagacggccagaaaggaccaatgggattcccagggccgcagggaccacatggattt
cctgggccacctggagagaagggtttacctggacctccagggagaaaaggacccactggt
cttccaggtcccagaggtgaaccggggccacctgcagatgcggatgactgtccccgaatc
ccagggcttcctggggtgccaggcctgagaggaccagaaggagccatgggactccctgga
atgagaggccccccaggaccagggtgcaaaggagagcctgggctggatggcaggaggggt
atggatggcattcctgggtctcctgggcctcccggacgtaaaggtgacacaggagaagac
ggctaccccggaggaccagggcctcctggtcccactggggatcctgggcccaaagggttt
ggcgctggatacctcagtggcttcctcctggttctccacagtcagacggaccaggagccc
acctgccccctgggcatgcccaggctctggactgggtatagtctgttatacctggaaggg
caagagaaagctcacaatcaagaccttggtctggcagggtcttgccttcccgtgtttagc
acgctgccctttgcctactgcaacatccaccaggtgtgccactatgcccagagaaacgac
agatcctactggctggccagcgctgcacccctccccatgatgccactctctgaagaggcg
atccgcccctacgtcagccgctgtgcggtatgtgaggccccggcccaggcggtggcggtg
cacagccaggaccagtccatccccccatgtccgcagacctggaggagcctctggatcggg
tattcattcctgatgcacacaggagctggggaccaaggaggagggcaggccctcatgtca
ccgggtagctgcctggaagatttcagagcagcaccattccttgaatgccaaggccggcag
ggaacttgccacttttttgcaaatgagtatagcttctggctgacaacagtgaaagcagac
ttgcagttttcctctgctccagcaccagacaccttaaaagaaagccaggcccaacgccag
aaaatcagccggtgccaggtctgcatgaagtatagctag
DBGET
integrated database retrieval system
