Cercocebus atys (sooty mangabey): 105587307
Help
Entry
105587307 CDS
T07242
Symbol
SMARCC2
Name
(RefSeq) SWI/SNF complex subunit SMARCC2 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
caty
Cercocebus atys (sooty mangabey)
Pathway
caty03082
ATP-dependent chromatin remodeling
caty04714
Thermogenesis
caty05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
caty00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105587307 (SMARCC2)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
105587307 (SMARCC2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
105587307 (SMARCC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
caty03021
]
105587307 (SMARCC2)
03036 Chromosome and associated proteins [BR:
caty03036
]
105587307 (SMARCC2)
Transcription machinery [BR:
caty03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
105587307 (SMARCC2)
Chromosome and associated proteins [BR:
caty03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
105587307 (SMARCC2)
PBAF complex
105587307 (SMARCC2)
GBAF(ncBAF) complex
105587307 (SMARCC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
Motif
Other DBs
NCBI-GeneID:
105587307
NCBI-ProteinID:
XP_011918865
Ensembl:
ENSCATG00000032123
UniProt:
A0A2K5LXV5
LinkDB
All DBs
Position
Unknown
AA seq
1245 aa
AA seq
DB search
MAVRKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
EEVFGKHVSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRN
VEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRHQGTVTEDKNNASHVVYP
VPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRKIHAK
WILDTDTFNEWMNEEDYEVNDDKNPVSRRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRK
RSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT
VNTKKDSESAPVKGGTMTDLDEQEDESMETTGKDEDENSTGNKGEQTKNPDLHEDNVTEQ
THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY
LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG
LVPLQPKTPQGRQVDADTKAGRKGKELDDLVPETAKGKPELQTSASQQMLNFPDKGKEKP
TDMQNFGLRTDMYTKKNVPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGS
RTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVA
SAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPE
RIEESGNDEARVEGQATDEKKEPKEPREGGGAIEEEAKEKTSEAPKKDEEKGKEGDSEKE
SEKSDGDPIVDPEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEGNLSTAAAAALAAA
AVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLA
DRQAFHMEQLKYAEMRARQQHFQQMHQQQQQPPPALPPGSQPIPPTGAAGPPAVHGLAVA
PASVVPAPAGSGAPPGSLGPSEQIGQAGSTAGPQQQQSAGAPQPGAVPPGVPPPGPHGPS
PFPNQQTPPSMMPGAVPGSGHPGVAGNAPLGLPFGMPPPPPPPAPSIIPFGSLADSISIN
LPPPPNLHGHHHHLPFAPGTLPPPNLPVSMANPLHPNLPATTTMPSSLPLGPGLGSAAAQ
SPAIVAAVQGNLLPSASPLPDPGTPLPPDPTAPSPGTVTPVPPPQ
NT seq
3738 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcggaagaaggacggcggccccaacgtgaagtactacgaggccgcggacacc
gtgacccagttcgacaacgtgcggctgtggctcggcaagaactacaagaagtatatacaa
gctgaaccacccaccaacaagtccctgtctagcctggttgtacagttactacaatttcag
gaagaagtttttggcaaacatgtcagcaatgcaccgctcactaaactgccgatcaaatgt
ttcctagatttcaaagcgggaggctccttgtgccacattcttgcagctgcctacaaattc
aagagtgaccagggatggcggcgttacgatttccagaatccatcacgcatggaccgcaat
gtggaaatgtttatgaccatcgagaagtccttggtgcagaataattgcctgtctcgacct
aacatttttctgtgcccagaaattgagcccaaactactagggaaattaaaggacattatc
aagagacaccagggaacagtcactgaggataagaacaatgcctcccatgttgtgtatcct
gtcccggggaatctagaagaagaggaatgggtacgaccagtcatgaagagggataagcag
gttcttctgcactggggctactatcctgacagttacgatacatggatcccagcgagtgaa
attgaagcatctgtggaagatgctccaactcctgagaaacctaggaagattcatgcaaag
tggatcctggacaccgacaccttcaatgaatggatgaatgaggaagactacgaagtaaat
gatgacaaaaaccctgtctcccgccgaaagaagatttcagccaagacattgacagatgag
gtgaacagcccagattcagatcgacgggacaagaaggggggaaactataagaagaggaag
cgctccccgtctccttcgccaaccccagaagcgaagaagaaaaatgctaagaaaggtccc
tcaacaccttatactaagtcaaagcgtggccacagagaagaggagcaagaagacctcaca
aaggacatggacgagccctcaccagtccccaatgtagaagaggtgacacttcccaaaaca
gtcaacacaaagaaagactcagagtcggccccagtcaaaggcggcaccatgactgaccta
gatgaacaggaagatgaaagcatggagactacgggcaaggatgaggatgagaacagtacg
gggaacaagggagagcagaccaagaatccagacctgcatgaggacaacgtgactgaacag
acccaccacatcatcattcccagctatgctgcctggtttgactacaatagcgttcatgcc
attgagcggagggctctccccgagttcttcaacggcaagaacaagtccaagactccagag
atctacctggcctatcgaaactttatgattgacacttaccgactgaacccccaagagtat
cttacctctaccgcctgtcgtcgaaacctagcgggtgatgtctgtgccatcatgagggtc
catgccttcctagaacagtggggtcttattaactaccaggtggatgctgagagtcgacca
accccaatggggcctccgcctacctctcacttccatgtcttggctgacacaccatcaggg
ctagtgcctctgcagcccaagacccctcagggccgccaggttgatgctgataccaaggct
gggcgaaagggcaaagagctggatgacctggtgccagagacggctaagggcaagccagag
ctgcagacctctgcttcccaacaaatgctcaactttcctgacaaaggcaaagagaaacca
acagacatgcaaaactttgggctgcgcacagacatgtacacaaaaaagaatgttccctcc
aagagcaaagctgcagccagtgccactcgtgagtggacagaacaggaaaccctgcttctc
ctggaggcactggaaatgtacaaagatgactggaacaaagtgtccgagcatgtgggaagc
cgcacacaggacgagtgcatcttgcattttcttcgtcttcccattgaagacccatacctg
gaggactcagaggcctccctaggccccctggcctaccaacccatccccttcagtcagtcg
ggcaaccctgttatgagcactgttgccttcttggcctctgtcgtcgatccccgagtcgcc
tctgctgctgcaaagtcagccctagaggagttctccaaaatgaaggaagaggtacccacg
gccttggtggaggcccatgttcggaaagtggaagaagcagccaaagtaacaggcaaggcg
gaccctgccttcggtctggaaagcagtggcattgcaggaaccacctctgatgagcctgag
cggattgaggagagcgggaatgacgaggctcgggtggaaggccaggccacagatgagaag
aaggagcccaaggaaccccgagaaggagggggtgccatagaggaggaagcaaaggagaaa
accagcgaggctcccaagaaggatgaggagaaagggaaagaaggtgacagtgagaaggag
tctgagaagagtgacggagacccaatagtcgatcctgagaaggagaaggagccaaaggaa
gggcaggaggaagtgctgaaggaagtggtggagtctgagggggaaaggaagacaaaggtg
gagcgggacattggcgagggcaacctctccaccgccgctgctgccgccctggctgctgcc
gcagtgaaagccaagcacttggctgctgttgaggaaaggaagatcaaatctttggtggcc
ctgctggtggagacccagatgaaaaagttggagatcaaacttcggcactttgaggagctg
gagactatcatggaccgggagcgagaagcactggagtatcagaggcagcagctcctggcc
gacagacaagccttccacatggagcagctgaagtatgcggagatgagggctcggcagcag
cacttccaacagatgcaccaacagcagcagcagccaccgccagccctgcccccaggctcc
cagcctatccccccgacaggggctgctgggccacccgcagtccatggcttggctgtggct
ccagcctctgtagtccctgctcctgctggcagtggggcccctccaggaagcttgggccct
tctgaacagattgggcaggcagggtcaactgcagggccacagcagcagcaatcagctgga
gccccccagcctggggcagtcccaccaggggttcccccccctggaccccatggcccctca
ccgttccccaaccaacaaactcctccctcaatgatgccaggggcagtgccaggcagcggg
cacccaggcgtggcgggtaatgctcctttgggtttgccttttggcatgccgcctcctcct
cctcctcctgctccatccatcatcccatttggtagtctagctgactccatcagtattaac
ctcccccctcctcctaacctgcatgggcatcaccaccatctcccattcgccccgggcact
ctccccccacctaacctgcctgtgtccatggcgaaccctctacatcctaacctgccggcg
accaccaccatgccatcttccttgcctctcgggccggggctcggatccgccgcagcccaa
agccctgccattgtggcagctgttcagggcaacctcctgcccagtgccagcccactgcca
gacccaggcacccccctgcctccagaccccacagccccgagcccaggcacggtcacccct
gtgccacctccacagtga
DBGET
integrated database retrieval system
