KEGG   Cercocebus atys (sooty mangabey): 105588588
Entry
105588588         CDS       T07242                                 
Symbol
ALYREF
Name
(RefSeq) THO complex subunit 4
  KO
K12881  THO complex subunit 4
Organism
caty  Cercocebus atys (sooty mangabey)
Pathway
caty03013  Nucleocytoplasmic transport
caty03015  mRNA surveillance pathway
caty03040  Spliceosome
caty05014  Amyotrophic lateral sclerosis
caty05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:caty00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105588588 (ALYREF)
  09122 Translation
   03013 Nucleocytoplasmic transport
    105588588 (ALYREF)
   03015 mRNA surveillance pathway
    105588588 (ALYREF)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    105588588 (ALYREF)
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    105588588 (ALYREF)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:caty03019]
    105588588 (ALYREF)
   03041 Spliceosome [BR:caty03041]
    105588588 (ALYREF)
Messenger RNA biogenesis [BR:caty03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     105588588 (ALYREF)
    TREX complex
     105588588 (ALYREF)
Spliceosome [BR:caty03041]
 Complex C
  Other components
   EJC/TREX
    105588588 (ALYREF)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    105588588 (ALYREF)
SSDB
Motif
Pfam: RRM_1 FoP_duplication FYTT
Other DBs
NCBI-GeneID: 105588588
NCBI-ProteinID: XP_011921494
Ensembl: ENSCATG00000033169
UniProt: A0A2K5M0K4
LinkDB
Position
Unknown
AA seq 264 aa
MPDSAPAMADKMDMSLDDIIKLNRSQRGGRGGGRGRGRAGSQGGRGGGAQAAARVSRGGG
PIRNRPAIARGAAGGGGRNRPAPYSRPKQLPDKWQHDLFDSGFGGGAGVETGGKLLVSNL
DFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDG
RPMNIQLVTSQIDTQRRPAQSVNRGGMTRNRGAGGFGGGGGTRRGTRGGARGRGRGAGRN
SKQQLSAEELDAQLDAYNARMDTS
NT seq 795 nt   +upstreamnt  +downstreamnt
atgcccgattccgcgcccgccatggccgacaaaatggacatgtctctggacgacatcatt
aaactgaaccggagccaacgaggcggccgcggcgggggccggggccgcggccgggccggc
tcccagggcggtcgcggcggtggggcgcaggccgccgcgcgagtgagtcgaggcggcggg
cccatccggaaccggccggccatcgcccgcggcgcggccggcggaggcggcaggaaccga
ccggcgccctacagcaggccaaaacaacttcccgacaagtggcagcacgatcttttcgac
agtggcttcgggggtggtgccggcgtggagacgggtgggaaactgctggtgtccaatctg
gattttggagtttcagacgccgatattcaggaactctttgctgaatttggaacgctgaag
aaggcggctgtgcactatgatcgctctggccgcagcttaggaacagcagacgtgcacttt
gagcggaaggcagatgccctgaaggccatgaagcagtacaacggtgtccctctggatggc
cgccccatgaacattcagcttgtcacatcacagattgatacacagcggagacctgcacag
agcgtaaacagaggtggcatgactagaaaccgtggcgctggaggttttggtggcggtgga
ggcactcggaggggcacccgtggaggcgcccgtggaagaggcagaggtgccggcagaaat
tcaaagcagcagctttcggcagaggagctggatgcccagctggacgcctataatgcgaga
atggacaccagttaa

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