Cercocebus atys (sooty mangabey): 105589156
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Entry
105589156 CDS
T07242
Symbol
XAB2
Name
(RefSeq) pre-mRNA-splicing factor SYF1
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
caty
Cercocebus atys (sooty mangabey)
Pathway
caty03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
caty00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105589156 (XAB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caty03019
]
105589156 (XAB2)
03041 Spliceosome [BR:
caty03041
]
105589156 (XAB2)
Messenger RNA biogenesis [BR:
caty03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
105589156 (XAB2)
Spliceosome [BR:
caty03041
]
Complex B
Other components
Prp19-related factors
105589156 (XAB2)
Complex C
105589156 (XAB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_M
HAT_Syf1_CNRKL1_C
HAT_Syf1_CNRKL1_N
TPR_14
HAT_PRP39_C
HAT_PRP39_N
TPR_2
TPR_8
TPR_12
TPR_19
Suf
TPR_15
ARM_TT21_C
TPR_1
ARM_TT21
TPR_MalT
TPR_7
TPR_21
Motif
Other DBs
NCBI-GeneID:
105589156
NCBI-ProteinID:
XP_011922705
LinkDB
All DBs
Position
Unknown
AA seq
746 aa
AA seq
DB search
MVVMARLSRPERPDLVFEEEDLPYEEEIMRNQFSVKCWLRYIEFKQGAPKPRLNQLYERA
LKLLPCSYKLWYRYLKARRAQVKHRCVTDPAYEDVNNCHERAFVFMHKMPRLWLDYCQFL
MDQGRVTHTRRTFDRALRALPITQHSRIWPLYLRFLRSHPLPETAVRGYRRFLKLSPESA
EEYIEYLKSSDRLDEAAQRLATVVNDERFVSKAGKSNYQLWHELCDLISQNPDKVQSLNV
DAIIRGGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAIRTVMTVRDFTQVFDSYA
QFEESMIAAKMETASELGREEEDDVDLELRLARFEQLISRRPLLLNSVLLRQNPHHVHEW
HKRVALHQGRPREIINTYTEAVQTVDPFKATGKPHTLWVAFAKFYEDNGQLDDARVILEK
ATKVNFKQVDDLASVWCQCGELELRHENYDEALRLLRKATALPARRAEYFDGSEPVQNRV
YKSLKVWSMLADLEESLGTFQSTKAVYDRILDLRIATPQIVINYAMFLEEHKYFEESFKA
YERGRQKTQPPACPCRGPAGRAAHRAVALPETLRHAAEAMKLTCVLYVACTLRRIASISL
MVSLVPADLEVLPRLQNAPVVVPQAYPGSQTGSRSCRWPGRVDLPELALHICKPAAHLTR
VLVRQHLGHRVGMQERDQPSRAQSKILFVRSDASREELAELAQQVNPEEIQLGEDEDEDE
MDLEPNEVRLEQQSVPAAVFGSLKED
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atggtggtgatggcgcgactctcgcggcccgagcggccggaccttgtcttcgaggaagag
gacctcccctatgaggaggaaatcatgcggaaccagttctctgtcaaatgctggcttcgc
tacatcgagttcaaacagggcgccccgaagcccaggctcaatcagctatatgagcgggca
ctcaagctgctaccttgcagctacaaactctggtaccgatacctgaaggcacgtcgggca
caggtgaagcatcgctgtgtgaccgaccccgcctacgaagatgtcaacaactgtcatgag
agggcctttgtgttcatgcacaagatgccccgtctgtggctagattactgccagttcctc
atggaccaggggcgcgtcacacatacccgccgcaccttcgaccgtgccctccgggcactg
cccatcacgcagcactctcgaatttggcccctgtatctgcgcttcctgcgctcacaccca
ctgcccgagacagctgtgcgaggctatcggcgcttcctcaagctgagtcccgagagtgca
gaggagtacattgagtacctcaagtcaagtgaccggctggatgaggccgcacagcgcctg
gccactgtggtgaacgacgagcgtttcgtgtctaaggctggcaagtccaactaccagctg
tggcacgagctgtgcgacctcatctcccagaacccggacaaggtacagtccctcaatgtg
gacgccatcatccgtgggggcctcacccgcttcaccgaccagctgggcaagctctggtgt
tcgctcgctgactactacatccgcagcggccacttcgagaaggctcgggatgtgtacgag
gaggccatccggacggtgatgaccgtgcgggacttcacacaggtgtttgacagctatgcc
cagtttgaggagagcatgatcgccgcaaagatggagaccgcctcagagctggggcgcgag
gaggaggacgacgtggacctggagctgcgcctggcccgcttcgagcagctcatcagccga
cgtcccctgctgctcaacagcgtcttgctgcgccagaacccacaccacgtgcacgagtgg
cacaagcgtgtcgccctgcaccagggccgcccccgggagatcatcaacacctacacagag
gctgtgcagacggtggaccccttcaaggccacaggcaagccccacactctgtgggtggcg
tttgccaagttttatgaggacaacgggcagctggacgatgcccgtgtcatcctggagaag
gccaccaaggtgaacttcaagcaggtggatgacctggcaagcgtgtggtgtcagtgcggg
gagttggagctccgacacgagaactacgatgaggccttgcggctgctgcgaaaggccacg
gcgctgcctgcccgccgggccgagtactttgatggctcagagcccgtgcagaaccgcgtg
tacaagtcgctgaaggtctggtccatgctcgccgacctggaggagagcctcggcaccttc
cagtccaccaaagccgtgtatgaccgcatcctggacctgcgcatcgcgacaccccagatc
gtcatcaactatgccatgttcctggaggagcacaagtactttgaggagagcttcaaggcg
tacgagcgcggcaggcagaaaacccagccgcctgcctgcccatgccgcggaccagcaggc
cgggcggctcaccgtgccgtggcactgccggagaccttgaggcatgctgcggaggccatg
aagttgacctgtgtgttgtacgtggcctgcacgctgcgccggatcgccagcatctccttg
atggtgtccctcgttcctgcggacctcgaagtccttccacgtctgcagaacgcgccggtc
gtcgtcccccaggcctacccggggtcacagactgggagcagaagctgtagatggcccggg
cgcgtcgatctccccgagcttgcactccatatctgcaaaccggcagcacatctcacgcgc
gtgctcgtccgacagcacctgggacacagggttgggatgcaggagcgcgaccagccctcg
cgtgcccagagcaagatcctgttcgtgaggagtgacgcctctcgggaggagctggcggag
ctggcacagcaggtcaaccccgaggagatccagctgggcgaggacgaggacgaggacgag
atggacctggagcccaacgaggttcggctggagcagcagagcgtgccagccgccgtgttc
ggcagcctgaaggaagactga
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