Cercocebus atys (sooty mangabey): 105590609
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Entry
105590609 CDS
T07242
Symbol
MSH2
Name
(RefSeq) DNA mismatch repair protein Msh2 isoform X1
KO
K08735
DNA mismatch repair protein MSH2
Organism
caty
Cercocebus atys (sooty mangabey)
Pathway
caty01524
Platinum drug resistance
caty03430
Mismatch repair
caty05200
Pathways in cancer
caty05210
Colorectal cancer
Brite
KEGG Orthology (KO) [BR:
caty00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
105590609 (MSH2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
105590609 (MSH2)
09162 Cancer: specific types
05210 Colorectal cancer
105590609 (MSH2)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
105590609 (MSH2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
caty03400
]
105590609 (MSH2)
DNA repair and recombination proteins [BR:
caty03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
105590609 (MSH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_I
MutS_IV
AAA_27
Motif
Other DBs
NCBI-GeneID:
105590609
NCBI-ProteinID:
XP_011925723
Ensembl:
ENSCATG00000040981
LinkDB
All DBs
Position
Unknown
AA seq
968 aa
AA seq
DB search
MAVQPKETLQLESAAEVGFVRFFQSMPEKPTTTVRLFDRGDFYTAHSEDALLAAREVFKT
QGVIKYMGPAGAKNLQSVVLSKMNFESFVKDLLLVRQYRVEVYKNRAGNKASKENDWYLA
YKASPGNLSQFEDILFGNNDMSASIGVVGVKMSTVDGQRQVGVGYVDSIQRKLGLCEFPD
NDQFSNLEALLIQIGPKECVLPGGETAGDMGKLRQIIQRGGILITERKKADFSTKDIYQD
LNRLLKGKKGEQMNSAVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYM
KLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERV
TFPIVFCHHLPWEQQCVFIEHPSKQSLGLYKQNKLNLVEAFVEDAELRQTLQEDLLRRFP
DLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKHEGKHQKLLLAVFVTPLTDLRS
DFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELREIMNDLEKKMQSTLISAARDLGL
DPGKQIKLDSSTQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTNSKLTSLNEEYTK
NKTEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPVPYVRPAIL
EKGQGRIILKASRHACVEVQDEITFIPNDIYFEKDKQMFHIITGPNMGGKSTYIRQTGVI
VLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVSTFMAEMLETASILRSATKDSLI
IIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMFATHFHELTALANQIPTVNNLHVTAL
TTEETLTMLYQVKKGVCDQSFGIHVAELANFPKHVIECAKQKALELEEFQYIGESQGYGM
EPAAKKCYLEREQGEKIIQEFLSKVKQMPFTEMSEENITIKLKQLKAEVIAKNNSFVNEI
ISRIKVTT
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcaacctaaggagacgctgcagctggagagcgcggccgaggtcggcttcgtg
cgattctttcagagcatgccggagaaaccgaccaccacggtgcgccttttcgaccggggc
gacttctatacggctcacagcgaggacgcgctgctggccgcccgggaggtgttcaagacc
cagggggtgatcaagtatatggggccggcaggagcaaagaatctgcagagtgttgtgctt
agtaaaatgaattttgaatcttttgtaaaagatcttcttctggttcgtcagtatagagtt
gaagtttataagaacagagctggaaataaggcatccaaggagaatgattggtatttggca
tataaggcttctcctggcaatctatctcagtttgaagacattctctttggtaacaatgat
atgtcagcttccattggtgttgtgggtgttaaaatgtccacagttgatggccagagacag
gttggagttgggtatgtggattccatacagaggaagctaggactgtgtgaattccctgat
aatgatcagttctccaatcttgaggctctcctcatccagattggaccaaaggaatgtgtt
ttacctggaggagagactgctggagacatggggaaactgagacagattattcaaagagga
gggattctgatcacagaaagaaaaaaagctgacttttccacgaaagacatttatcaggac
ctcaaccggctgttgaaaggcaaaaagggagaacagatgaatagtgctgtattgccagaa
atggagaatcaggttgcagtttcatcattgtctgcggtaatcaagtttttagaactctta
tcagatgattccaattttggacagtttgaactgactacttttgacttcagccagtacatg
aaattggatattgcagcagtcagagcccttaacctttttcagggttctgttgaagatacc
actggctctcagtctctggctgccttgctgaataagtgtaaaacccctcaaggacaaaga
cttgttaaccagtggattaagcagcctctcatggataaaaacagaatagaggagagggtc
acatttcctattgtattttgccaccacctgccctgggagcaacagtgtgtgtttattgaa
catccttccaagcagagtctgggcctatacaagcaaaacaaattgaatttagtggaagct
tttgtagaagatgcagaattgaggcagactttacaagaagatttacttcgtcgattccca
gatcttaaccgacttgccaagaagtttcaaagacaagcagcaaacttacaagattgttac
cggctctatcagggtataaatcaactacccaatgttatacaggctctggaaaaacatgaa
ggaaaacaccagaaattattgttggcagtttttgtgactcctcttactgatcttcgttct
gatttctccaagtttcaggaaatgatagaaacaactttagatatggatcaggtagaaaac
catgaattccttgtaaaaccttcatttgatcctaatctcagtgaattaagagaaataatg
aatgacttggaaaagaagatgcagtcaacattaataagtgcagccagagatcttggcttg
gaccctggcaaacagattaaactggattccagtacacagtttggatattactttcgtgta
acctgtaaggaagaaaaagtccttcgtaacaataaaaactttagtactgtagatatccag
aagaacggtgttaaatttaccaacagcaaattgacttctttaaatgaagagtataccaaa
aataaaacagaatatgaagaagcccaggatgccattgttaaagaaattgtcaatatttct
tcaggctatgtagaaccaatgcaaacactcaatgatgtattagctcagctagatgctgtt
gtcagctttgctcatgtgtcaaatggagcacctgttccatatgtacgaccagccattttg
gagaaaggacaaggaagaattatattaaaagcatccaggcatgcttgtgttgaagttcaa
gatgaaatcacgtttattcctaatgatatatactttgaaaaagataaacagatgttccac
ataattactggccccaatatgggaggtaaatctacatatattcgacaaactggggtgata
gtactcatggcccaaattgggtgttttgtgccatgtgagtctgcagaagtgtccattgtg
gactgcatcttggcccgggtaggggctggtgacagtcagttgaaaggagtctccacattc
atggctgaaatgttggaaactgcttctattctcaggtcggcaaccaaagattcattaata
atcatagatgaattgggaagaggaacttctacctacgatggatttgggttagcatgggct
atatcagaatacattgcaacaaagattggtgctttttgcatgtttgcaacccattttcat
gagcttactgccttggccaatcagataccaactgttaataatctacatgtcacagcactc
accactgaagagaccttaactatgctttatcaggtgaagaaaggtgtctgtgatcaaagt
tttgggattcatgttgcagagcttgctaatttccctaagcatgtaatagagtgtgctaaa
cagaaagccctggaactcgaagagtttcagtatattggagaatcacaaggatatggtatg
gaaccagcagcaaagaagtgctatctggaaagagagcaaggtgaaaaaattattcaggag
ttcctgtccaaggtgaaacaaatgccctttactgaaatgtcagaagaaaacatcacaata
aagttaaaacagctaaaagctgaagtaatagcaaagaataatagctttgtaaatgaaatc
atttcacgaataaaagttactacgtga
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