Cercocebus atys (sooty mangabey): 105594164
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Entry
105594164 CDS
T07242
Symbol
SETX
Name
(RefSeq) LOW QUALITY PROTEIN: probable helicase senataxin
KO
K10706
ATP-dependent RNA/DNA helicase, senataxin [EC:
5.6.2.5
5.6.2.3
]
Organism
caty
Cercocebus atys (sooty mangabey)
Pathway
caty05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
caty00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
105594164 (SETX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
caty03021
]
105594164 (SETX)
Enzymes [BR:
caty01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
105594164 (SETX)
5.6.2.5 RNA 5'-3' helicase
105594164 (SETX)
Transcription machinery [BR:
caty03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
105594164 (SETX)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_11
AAA_12
AAA_19
AAA_30
UvrD-helicase
AAA_22
ResIII
NAT10_TcmA_helicase
AAA_16
nSTAND3
UvrD_C_2
Motif
Other DBs
NCBI-GeneID:
105594164
NCBI-ProteinID:
XP_011933297
Ensembl:
ENSCATG00000043139
LinkDB
All DBs
Position
Unknown
AA seq
2680 aa
AA seq
DB search
MSTCCWCTPGGGSTVDFLKRYASNTPSSEFQTADEDLCYCLECVAEYHKARDELPFLHEV
LWELETLRLINHFEKSMKAEIGDDDELYIVDNNGEMPLFDITGQDFENKLRVPLLEILKY
PYLLLHERVNELCVEALCRMEQANCSFQVFDKHPGIYLFLVHPNDMVRRWAILTARNLGK
VDRDDYYDLQEVLICLFKVIELGLLESPDIYTSSVLEKGKLILLPSHMYDTTNYKSYWLG
ICMLLTILEEQAMDSLLLGSDKQNDFMQSILHTMERQSDDDSVDPFWPALHCFMVILDRL
GSKVWGQLIDPIEAFQTIINNASYNREIQHIRNSSVRTKLEPGSYLDDMVTCSQIVYNYN
PEKTKKDSGWRTAICPDYCPNMYEEMETLASVLQSDIGQDMRVHNSTFLWFIPFVQSLMD
LKDLGVAYIVEVVHHLYSEVKDVLNQTDAMCDKVTEFFLLILVSVIELHRNKKCLHLLWV
SSQQWVEAVVKCAKLPTTAFTRSSEKSSGNCSKGTAMISSLSLHSMPSNSVQLACVQLIR
SLLKEGYQLGQQSLCKRFWDKLNLFLRGNLSLGWQLTSQETHELQTCLKQIIRNIKFKAP
PCNTFVDLTSTCKTSPASYNKEESEQIGKKSRKDMHCLEASSPTFSKEPMKAQDSVLIKA
DNTIEGDNDKQNYIKDVKLEDQLSAGSCLKQSSENIFTERAEDEIKISTRKQKSVKENSS
YTPEDCTSRNGPERGCDRGIIVSTRLLTDSSTDALEKVSTSNEDFSLKDDALAKTSKRKT
KVQKDEICAKLSHVIKKQHRKSTLVNNTINLDENLTVSSIERFYSRKDTGVQKGDGFIHN
LSLDRSGVLDDNKNGEQKSQNNLLPEEKQLKNEELDIFCSHENNCEIQEFHVDDKDSIPF
AEMANTFEKKSSSFKDLMTVPESRDEATSNSTNVIYSNLTREQAPGISPKSDTLTDSQID
RDLHKLSLLAQASVITFPSDSPQNSSQLQRKGKEDKRCFTANQNNVGDASRGQVIIISDS
DDDDDDERILSLEKLTKQDKRCLEKERPEQHISTVKEEKNPIKEEKTKSLFQFEESDSQC
FEFESASEVFSVWQDHLDNNNSVQDGEKKCLTPIANTTNGQDCTDYVSEVVKKGAEGIEE
HARPQSSRVSVEEFCEIEVKKPKRKRSEKPIPEDPVRPSTSVGNEGQSDINKRDLIGNDF
KSIDRRTTTPNSSIQRATTVSQKKSSKLCTYTEPVRKVPVSKTPKKTHSDAKKGQNRSSN
YLSCRTTPAIVPPKKFRQCPEPASTVEKLGLKKGPRRAFELSQRSLDYVAQLRDHGKTVG
VVDTRKKTKLISPQNLSVRHNKKLLTSQELQMQRQIRPKSQKNRQRLSDCKSTDTTRAGP
HTAHNSDLLVPESDRSDYDCTGGTEVLANSNGKQLIKCMPSEPETIKAKHGSPATDGACP
LNQCDSIVLNGTVPTSEVIVCTSEDPLGGGDPTAHHTEMATLNEGEPDSSSDIEEDNLFL
TQNDPEDMDLCSQMENDNYKFIELIHGKDTVQVEEDSVSQPQLESLSGTKCKYKDCLETT
KNQGEYCPQHSEVKAADDDVFRKPGLPPSASKPLRPTTAKIFSSKSTSRIAGLSKSLETS
SALSPSLKNKSKGIQSILKVPQPAPLVAQKPVGEMKNSSNVLHPQSPNNSNRQGCKVPFG
ESKYFPSSSPVNVLLSSQSVSDTFVKEVLKWKYEMFLNFDQCGPPASLCQSISRPVPVRF
HNYGDYFNIFFPLVVLNTFETVVQEWLNSPNRENXKKKKVRKFPADYIKXKKKKVYLEEC
ELAKQLYPKENDLVFLVPERINEEKKDAERNDIQDLHEYHSGYVHKFRRTSVMRNGKAEC
YLSIQTQENFPANLNELVNCIVISSLVTTQRKLKAMSLLGSRNQLARAVLNPNPMDFCTK
DLLTTTSERIIAYLRDFNEDQKKAIETAYAMVKHSPSVAKICLIHGPPGTGKSKTIVGLL
YCLLTENQRKGHSDENSNAKIKQNRVLVCAPSNAAVDELMKKIILEFKEKCKNKKNPLGN
CGDINLVRLGPEKSINNEVLKFSLDSQVNHRMKKDLPSHVQAMHKRKEFLDYQLDELSRQ
RALCRGGREIQRQELDENISRVSKERQELASKIKEVQGRPQKTQSIIILESHVICCTLST
SGGLLLESAFRGQGGVPFSCVIVDEAGQSCEIETLTPLIHRCNKLILVGDPKQLPPTVIS
MKAQEYGYDQSMMARFCRLLEENVEHNMISRLPILQLTVQYRMHPDICLFPSNYIYNRNL
KTNRQTETIRCSSDWPFQPYLVFDVGDGSERRDNDSYINVQEIKLVMEIIKLIKDKRKDV
SFRNIGIITHYKAQKTMIQKDLDKEFDRKGPAEVDTVDAFQGRQKDCVIVTCVRANSVQG
SIGFLASLQRLNVTITRAKYSLFILGHLRTLMENQHWNQLIQDAQKRGAIIKTCDKNYRH
DAMKILKLKPVLQRSLTHPPTIAPEVSRPQGGLPSSKLDSGFAKTSFAASLYHTPSDSKE
TTLTVTSKDPERPPVHDQLRDPRLLKRMGIEVKGGIFLWDPQPSSPQHPGATPPAGEPSF
PVVHQDLGHVQQPAAVVAALSSHKPPVQGEPPAASPEASTCQSKCDDPEEELCHRREARA
FSEGEQEKCGSETPHTRRNSRWDKRRPEQEDSSSKKRKLL
NT seq
8043 nt
NT seq
+upstream
nt +downstream
nt
atgagcacatgttgttggtgtactccaggtggtggttccaccgttgacttcctaaagcgc
tatgcttccaacactccatccagtgaatttcaaacagctgacgaagatctctgctactgc
ttagagtgtgtggcagaataccacaaagcaagagatgaattgccattcttgcatgaggtt
ttatgggaattggaaaccttacgtctgataaatcactttgaaaaatccatgaaggcagaa
attggagatgatgatgagttatatatagtagacaacaatggagagatgccactgtttgac
atcactggacaagactttgaaaataagcttcgagttcctcttcttgaaatactgaaatat
ccttatttgcttctacatgaacgtgttaacgagttatgtgttgaagcactttgtcggatg
gaacaagccaattgctcctttcaggtgtttgacaaacatccagggatctatttgtttttg
gtccatcccaatgatatggttcggcgttgggctatcttgactgcaagaaacttggggaaa
gtggacagagatgattattatgacttacaagaagttttaatttgcctttttaaagtcatt
gagttgggacttctagagagtccagacatttatacttcttctgtcctagagaagggtaaa
ctaattcttctgccctcacacatgtatgatactaccaactacaaaagctattggttaggt
atttgcatgttgctgaccattcttgaggagcaagccatggattccctattgttgggctca
gacaaacaaaatgattttatgcaatcgatacttcacactatggagaggcaatcagatgat
gatagtgtggatcctttctggccagcattacactgttttatggtgattctggaccgcctt
ggatctaaggtctggggtcagcttattgatcctattgaggcatttcaaaccattatcaac
aatgcaagctacaatagagagatccaacatatacggaacagctctgtaaggaccaagtta
gaaccggggtcgtatttggatgatatggtgacttgcagccagatcgtatacaattataat
cctgaaaagaccaaaaaggattctggatggagaacagccatttgcccagattattgtcct
aacatgtatgaagaaatggaaacattagccagtgtgcttcagtcagatattggtcaagac
atgcgtgttcataacagcacatttctgtggttcatcccttttgtccagtccctcatggat
cttaaggatttgggtgtggcttacatagtagaggttgttcatcatctgtactctgaagtc
aaagatgtcctcaaccaaacagatgccatgtgtgacaaagtcactgaattttttcttcta
attttggtatcagtgattgaactgcatagaaataaaaaatgtttgcatttgctgtgggta
agttcccagcaatgggtagaagctgtcgtcaaatgtgccaagcttcctaccactgcattt
acacggagttctgagaaatcgtctggcaattgctccaaaggaacagcaatgatatcatca
ctgtcgttgcattccatgccatctaactctgtacaacttgcttgtgtgcagctgattaga
agtctccttaaagaaggttatcagcttgggcagcaatctctttgcaagcgattctgggat
aaactcaacttattccttagaggaaatttatctctaggttggcagttgactagtcaggaa
acccacgagctacaaacttgtttaaagcagattattagaaacataaaattcaaagcacct
ccatgtaacacttttgtggatctgacttctacatgtaaaacctctcctgcatcttataat
aaagaagaaagtgaacaaatagggaagaagtctagaaaagatatgcattgtttggaggct
tccagcccaacattttctaaagaaccaatgaaagcgcaagacagtgtactgatcaaagca
gataacactatagaaggtgacaatgataagcaaaattatataaaggatgtgaaactagaa
gaccagctctcagctgggtcatgcttaaagcagagtagtgaaaacatttttactgaaaga
gctgaagatgaaattaaaataagtacaaggaagcagaagtctgtaaaagagaactcctca
tatacaccagaggattgtacttcaagaaatggtccagaaaggggatgtgacagaggaata
atagtatcaacacgtttgttgactgattctagcacagatgctttggaaaaagtgtccaca
tcaaatgaagatttctctttaaaggatgatgctcttgctaaaacctcaaaacgaaaaact
aaggtacagaaagatgaaatctgtgcaaagttatcacatgtaataaagaagcaacacagg
aagagtactttggtcaataatactatcaatttagacgaaaatttgactgtatctagcatt
gagcgtttctattcaaggaaagatacaggagttcagaaaggagatggtttcatacacaat
ctttctttagaccgtagtggtgttctggatgataataagaatggggaacaaaaatctcaa
aacaatttattgccagaagagaagcaattaaagaatgaagagttagatattttctgttcc
catgaaaacaattgtgaaatacaggaatttcatgttgatgataaagattcgatccccttt
gcagaaatggccaatactttcgagaagaaatcatcttcctttaaagatcttatgactgta
cctgaatcaagagatgaggcgacgagtaatagtaccaatgtgatttattctaacttgaca
agagaacaggcccctggcatcagtcctaaatctgacaccttaacggattctcagatagac
agagaccttcacaaattatctttactagctcaagccagtgttatcacgtttccatctgat
tcccctcagaactcatcccagctacaaaggaaaggaaaagaagataaaagatgtttcaca
gctaaccaaaataatgttggcgatgcctcccgtggacaggtgattattatttcagattct
gatgatgatgatgatgatgaaagaatcctgagtcttgagaaactcactaaacaggacaaa
agatgccttgagaaggaacgtccagagcagcacatttcaacagtcaaggaggaaaagaat
ccaataaaggaagaaaagacgaagtctctttttcagtttgaggaatctgattctcagtgt
tttgagtttgaaagtgcatctgaagtgttttccgtttggcaagatcatctagacaataat
aattcagttcaagatggtgagaaaaaatgtttgactcctatagccaataccacaaatggt
caggattgtacagattatgtatctgaagttgttaaaaaaggggcagagggtattgaagaa
cacgcaagaccacagagcagtcgtgtttctgttgaggaattttgtgaaattgaagtaaaa
aagcctaagagaaaacgatctgaaaaaccaattcctgaagatcctgtgaggccttcaact
tctgtcggaaatgagggccagtctgatattaataagagagatcttattggaaatgatttt
aaaagtatagatagaaggactacaactcccaattcaagtattcagagagccactacggtt
tcacaaaagaaatcttcaaagctttgtacttacacagaacccgtcaggaaagttccagtt
tctaagacccctaagaaaactcattcggatgccaaaaaaggacagaatagaagttcaaat
tacctcagttgtaggacaactcctgctatagtgccaccaaagaaatttcgtcagtgtcct
gaaccagcttcaacagtggagaaacttggcctgaaaaagggtcctcgtagggcatttgag
ttgtcccagcgatctttggattatgtagctcagttacgtgatcatggcaaaactgttgga
gtagttgatactcgaaaaaagactaaattaatttctcctcagaacctgtctgtcagacat
aataagaaactgctgactagtcaagaacttcagatgcaaaggcagatcagacccaaatca
caaaaaaatagacaaagactttctgattgtaaaagtacagatactacaagagcagggcct
catacagcacataattctgacttacttgtaccagaatctgataggtcagattatgattgt
acaggaggaactgaggtacttgccaacagtaatggaaaacaattaataaaatgcatgcct
tctgaaccagaaaccataaaagcaaaacatgggtctccagcgactgatggtgcttgccct
ttgaaccaatgtgattctatagtgttaaatggaacggtaccaacaagtgaagtaattgtc
tgtacttcagaggaccctctggggggaggtgatccgacagcacatcatacagagatggca
actttgaacgagggagagcctgactccagcagtgatatagaggaagataacttgttttta
acacaaaatgatcctgaagatatggatttatgttcacaaatggagaatgacaattataaa
ttcattgaactaattcatggaaaagatacagttcaggttgaagaagattctgtaagtcag
cctcagttggaatctttgagtggcacaaagtgtaagtacaaagattgtcttgaaaccaca
aaaaaccagggtgaatactgcccacaacactctgaagtgaaagcagcagatgacgatgta
tttcgtaaacctggtttgcctccttctgcatctaaacctttgagacctaccactgctaag
atttttagctcaaagagtacttcacgaattgctggtctttctaaatctttggaaacttct
tcagcactttcaccatctctaaaaaataagtcaaaggggatacagtcaattttgaaagta
ccacagccagctcccctcgtagctcagaagccagtgggtgaaatgaaaaattcgagcaat
gttcttcatcctcagtctccgaataattccaacaggcaaggttgcaaagttccatttggt
gaaagcaaatattttccatcttcctctccagtaaacgttctcttgtcatcacagtctgtc
tctgacaccttcgttaaagaggtcttaaaatggaaatatgaaatgtttttgaactttgat
cagtgtgggccccctgcaagtctttgtcagtccatctcgagacctgtgcctgtcagattt
cacaattatggagattattttaatatttttttccctttggtggtattgaatacttttgaa
acagtggtgcaggaatggctcaactctccaaatagagagaattaaaaaaaaaaaaaagta
cgaaaatttcctgccgattatataaaataaaaaaaaaaaaaggtttatctggaagaatgt
gaattggctaaacagctttatccaaaggaaaacgatttggtgtttttagttcctgagaga
ataaatgaagagaagaaagatgcagagagaaatgacatacaagatctccacgaatatcat
tctggttatgttcataaatttcgccgcacttcagtcatgcgtaatgggaaagctgagtgt
tacctttccatccagactcaagagaattttccggccaatttaaacgaacttgtgaattgt
attgtaatcagttctctggtaacgacacaaaggaagttgaaagccatgtctctgttgggt
agtcggaaccaactggctagagctgttctgaatccaaaccctatggacttctgtacaaaa
gatttactaactacaacatctgagagaattattgcttacttaagagatttcaatgaagac
caaaagaaagcaatagaaactgcatatgctatggtgaaacactcaccatcagttgccaaa
atctgcttgattcatggaccacctggaacaggaaaatcaaaaactattgtcggcctcctc
tattgtctactgacagagaaccagaggaaggggcattcagacgaaaactccaatgccaaa
atcaaacaaaaccgtgtcctcgtgtgtgcaccttccaatgcagctgttgatgaactcatg
aaaaaaattatccttgaattcaaagaaaaatgtaaaaacaagaagaatcctttaggaaac
tgtggagatataaatttagtacgactgggtccagaaaagtctattaataatgaggttcta
aagttcagtttggacagccaagtaaaccacagaatgaaaaaagatttaccttctcatgtt
caggcgatgcataaaagaaaggaatttctagattatcagttggatgagctttcccggcag
cgagctctatgccgaggtggacgggaaatacagaggcaagaattagatgaaaacatttcc
agagtttctaaggaaaggcaggaacttgcttctaaaattaaagaggttcaaggacgccca
cagaaaacacagagtatcatcatcttagagtcccatgtcatctgctgcacattgagcaca
agtggtggcttactacttgaatctgctttccgggggcaagggggtgtccccttcagctgt
gtcattgttgatgaggctggacagtcttgtgaaattgagactcttaccccactcatccat
cgctgcaataagctcatcctagtaggagatcccaagcagctccctcccacagtcatctct
atgaaagcacaggagtatggctacgaccagtcaatgatggctcgcttctgcagactgctg
gaagagaatgtagaacacaacatgatcagcaggctgcctattctgcagctgactgtgcag
tacaggatgcatccagacatatgcctcttcccttccaattatatttacaacagaaactta
aaaacaaatagacagacagaaaccattcgatgttcatcagactggccatttcaaccatac
cttgtgtttgatgtcggagatggttcagaaagacgggataatgactcatacataaatgtt
caagaaataaaactggtgatggaaataattaagcttattaaagacaaaagaaaggatgtt
agttttcgaaacattggcataataactcattacaaggcccagaagacgatgattcagaag
gatttggacaaagagtttgatagaaaaggaccagcagaagtagatactgtggatgcgttc
cagggtcggcagaaggattgtgttattgttacgtgtgtcagagcaaatagcgtgcaaggt
tcaattggattcctggcaagtttgcagagattgaatgtcaccatcacacgagccaagtac
agcctcttcattctcggacatttgaggaccctgatggaaaaccagcattggaatcagctg
attcaggatgctcagaagcgtggtgccattattaagacctgtgacaaaaactatagacat
gatgcaatgaagattctgaaactcaagcccgtgctacagagaagtctcactcaccctcct
accatagccccagaggtatccagaccccagggtggcttgcccagcagcaagctagacagt
ggatttgccaagacatcttttgctgcttctctataccacacaccctctgactccaaggaa
actactcttactgttacttcaaaggaccctgaaagacctcctgttcatgaccaacttcgg
gacccacgactgctgaagaggatgggcattgaggtcaaaggaggaatattcctatgggat
ccacagccctcgagcccccagcatcctggagcaacacctcctgcaggagagccgagcttc
cctgtcgttcaccaggacctgggccatgtacagcagcctgctgctgtagtggctgctctg
agcagccacaaacctcccgtgcagggcgaacctccagctgccagtcccgaggcttccacg
tgtcagagcaaatgtgatgacccagaagaggagctctgtcacaggagagaggccagggct
ttcagtgaaggcgagcaggagaagtgtggttccgagacccctcacaccaggaggaactct
aggtgggacaagaggagaccggagcaggaggacagcagttccaagaaaagaaagctttta
tag
DBGET
integrated database retrieval system
