Cercocebus atys (sooty mangabey): 105594924
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Entry
105594924 CDS
T07242
Symbol
ARID1A
Name
(RefSeq) AT-rich interactive domain-containing protein 1A isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
caty
Cercocebus atys (sooty mangabey)
Pathway
caty03082
ATP-dependent chromatin remodeling
caty04714
Thermogenesis
caty05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
caty00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105594924 (ARID1A)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
105594924 (ARID1A)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
105594924 (ARID1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
caty03000
]
105594924 (ARID1A)
03021 Transcription machinery [BR:
caty03021
]
105594924 (ARID1A)
03036 Chromosome and associated proteins [BR:
caty03036
]
105594924 (ARID1A)
Transcription factors [BR:
caty03000
]
Eukaryotic type
Helix-turn-helix
ARID
105594924 (ARID1A)
Transcription machinery [BR:
caty03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
105594924 (ARID1A)
Chromosome and associated proteins [BR:
caty03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
105594924 (ARID1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
105594924
NCBI-ProteinID:
XP_011935376
Ensembl:
ENSCATG00000035561
UniProt:
A0A2K5MG00
LinkDB
All DBs
Position
Unknown
AA seq
2286 aa
AA seq
DB search
MAAQVAPAAASSLGNPPPPPPSELKKAEQQQREEAGGEAAAAAAAERGEMKAAAGQESEG
PAVGPPQPLGKELQDGAESNGGGGGGGAGGGGGPGAEPDLKNSNGNAGPRPALNNNLTEP
PGGGGGGSSDGVGAPPHSAAAALPPPAYGFGQPYGRSPSAVAAAAAAVFHQQHGGQQSPG
LAALQSGGGGGLEPYAGPQQNSHDHGFPNHQYNSYYPNRSAYPPPAPAYALSSPRGGTPG
SGAAAAPGSKPPPSSSASASSSSSSFAQQRFGAMGGGGPSAAGGGTPQPTATPTLNQLLT
SPSSARGYQGYPGGDYGGGPQDGGAGKGPADMASQCWGAAAAAAAAAAAAASGGAQQRSH
HAPMSPGSSGGGGQPLARTPQPSSPMDQMGKMRPQPYGGTNPYSQQQGPPSGPQQGHGYP
GQPYGSQTPQRYPMTMQGRAQSAMGGLSYTQQIPPYGQQGPSGYGQQGQTPYYNQQSPHP
QQQQPPYSQQPPSQTPHAQPSYQQQPQSQPPQLQSSQTPYSQQPSQPPHQQSPTPYPSQQ
STTQQHPQSQPSYSQPQAQSPYQQQQPQQPAPSTLSQQAAYPQPQSQQSQQTAYSQQRFP
PPQELSQDSFGSQASSAPSMTSSKGGQEDMNLSLQSRPSSLPDLSGSIDDLPMGTEGALS
PGVSTSGISSSQGEQSNPAQSPFSPHTSPHLPGIRGPSPSPVGSPASVAQSRSGPLSPAA
VPGNQMPPRPPSGQSDSIMHPSMNQSSIAQDRGYMQRNPQMPQYSSPQPGSALSPRQPSG
GQIHTGMGSYQQNSMGSYGPQGGQYGPQGGYPRQPNYNALPNANYPSAGMAGGINPMGAG
GQMHGQPGIPPYGTLPPGRMSHASMGNRPYGPNMANMPPQVGSGMCPPPGGMNRKTQETA
VAMHVAANSIQNRPPGYPNMNQGGMMGTGPPYGQGINSMAGMINPQGPPYSMGGTMANNS
AGMAASPEMMGLGDVKLTPATKMNNKADGTPKTESKSKKSSSSTTTNEKITKLYELGGEP
ERKMWVDRYLAFTEEKAMGMTNLPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELAT
NLNVGTSSSAASSLKKQYIQCLYAFECKIERGEDPPPDIFAAADSKKSQPKIQPPSPAGS
GSMQGPQTPQSTSSSMAEGGDLKPPTPASTPHSQIPPLPGMSRSNSVGIQDAFNDGSDST
FQKRNSMTPNPGYQPSMNTSDMMGRMSYEPNKDPYGSMRKAPGSDPFMSSGQGPNSGMGD
PYSRAAGPGLGNVAMGPRQHYPYGGPYDRVRTEPGIGPEGNMSTGAPQPNLMPSNPDSGM
YSPSRYPPQQQQQQQRHDSYGNQFSTQGTPSGSPFPSQQTTMYQQQQQNYKRPMDGTYGP
PAKRHEGEMYSVPYSTGQGQPQQQQLPPAQPQPASQQQAAQPSPQQDVYNQYGNAYPATA
TAATERRPAGGPQNQFPFQFGRDRVSAPPGTNAQQNMPPQMMGGPIQASAEVAQQGTMWQ
GRNDMTYNYANRQSTGSAPQGPAYHGVNRTDEMLHTDQRANHEGPWPSHGTRQPPYGPSA
PVPPMTRPPPSNYQPPPSMQNHIPQVSSPAPLPRPMENRTSPSKSPFLHSGMKMQKAGPP
VPASHIAPAPVQPPMIRRDITFPPGSVEATQPVLKQRRRLTMKDIGTPEAWRVMMSLKSG
LLAESTWALDTINILLYDDNSIMTFNLSQLPGLLELLVEYFRRCLIEIFGILKEYEVGDP
GQRTLLDPGRFSKVSSPAPMEGGEEEEELLGPKLEEEEEEEVVENDEEIAFSGKDKPASE
NSEEKLISKFDKLPVKIVQKNDPFVVDCSDKLGRVQEFDSGLLHWRIGGGDTTEHIQTHF
ESKTELLPSRPHAPCPPAPRKHVTTAEGTPGTTDQEGPPPDGPPEKRITATMDDMLSTRS
STLTEDGAKSSEAIKESSKFPFGISPAQSHRNIKILEDEPHSKDETPLCTLLDWQDSLAK
RCVCVSNTIRSLSFVPGNDFEMSKHPGLLLILGKLILLHHKHPERKQAPLTYEKEEEQDQ
GVSCNKVEWWWDCLEMLRENTLVTLANISGQLDLSPYPESICLPVLDGLLHWAVCPSAEA
QDPFSTLGPNAVLSPQRLVLETLSKLSIQDNNVDLILATPPFSRLEKLYSTMVRFLSDRK
NPVCREMAVVLLANLAQGDSLAARAIAVQKGSIGNLLGFLEDSLAATQFQQSQASLLHMQ
NPPFEPTSVDMMRRAARALLALAKVDENHSEFTLYESRLLDISVSPLMNSLVSQVICDVL
FLIGQS
NT seq
6861 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgcaggtcgcccccgccgccgccagcagcctgggcaacccgccgccgccgccg
ccctcggagctgaagaaagccgagcagcagcagcgggaggaggcggggggcgaggcggcg
gcggcggcagcggccgagcgcggggaaatgaaggcagccgccgggcaggaaagcgagggc
cctgccgtggggccgccgcagccgctgggaaaggagctgcaagacggggccgagagcaat
gggggtggcggcggcggcggagctggcggcggcggcgggcccggcgcggagccggacctg
aagaactcgaacgggaacgcgggccctaggcccgccctgaacaataacctcacggagccg
cccggcggcggcggtggcggcagcagcgatggggtgggggcgcctcctcactctgccgcg
gccgccttgccgcccccagcctacggcttcgggcaaccctacggccggagcccgtctgcc
gtcgccgccgccgcggccgccgtcttccaccaacaacatggcggacaacaaagccctggc
ctggcagcgctgcagagcggcggcggcgggggcctggagccctacgcggggccccagcag
aactctcacgaccacggcttccccaaccaccagtacaactcctactaccccaaccgcagc
gcctaccccccgcccgccccggcctacgcgctgagctccccgagaggtggcactccgggc
tccggcgcggcggcggctcccggctccaagccgcctccctcctccagcgcctccgcctct
tcgtcgtcttcgtccttcgctcagcagcgcttcggggccatggggggaggcggcccctcc
gcggccggcgggggaactccccagcccaccgccacccccaccctcaaccaactgctcaca
tcgcccagctcggcccggggctaccagggctaccccgggggcgactacggcggcgggccc
caggacgggggcgccggcaagggcccggcggacatggcctcgcagtgctggggggctgcg
gcggcggcagcggcggcggcggcggcggccgcctcgggaggggcccaacaaaggagccac
cacgcgcccatgagccccgggagcagcggcggcggggggcagccgctcgcccggacccct
cagccatccagtccaatggatcagatgggcaagatgagacctcagccatatggcgggact
aacccatactcgcagcaacagggacctccgtcaggaccgcagcaaggacatgggtaccca
gggcagccatatgggtcccagaccccgcagcggtacccgatgaccatgcagggccgggcg
cagagtgccatgggcggcctctcttatacacagcagattcctccttatggacaacaaggc
cccagcgggtatggtcaacagggccagactccatattacaaccagcaaagtcctcaccct
cagcagcagcagccaccctactcccagcaaccaccatcccagacccctcatgcccaacct
tcgtatcagcagcagccacagtctcagccaccacagctccagtcctctcagactccatac
tcccaacagccatcccaacctccacatcagcagtccccgactccatacccctcccagcag
tccacgacacagcagcaccctcagagccagccctcctactcacagccacaggctcagtct
ccctaccagcagcagcaacctcagcagccagcaccctcgacgctctcccagcaggctgcg
tatcctcagccccagtctcagcagtcccagcaaactgcctattcccaacagcgcttccct
ccaccgcaggagctatctcaagattcatttgggtctcaggcatcctcagccccctcaatg
acctccagtaagggagggcaagaagatatgaacctgagccttcagtcaagaccctccagc
ttgcctgatctatctggttcaatagatgacctccccatggggacagaaggagctctgagt
cctggagtgagcacatcagggatttccagcagccaaggagagcagagtaatccagctcag
tctcctttttctcctcatacttcccctcacctgcctggcatccgaggcccctccccatcc
cctgttggctctcccgccagtgttgctcagtctcgctcaggaccactctcgcctgctgca
gtgccaggcaaccagatgccacctcggccacccagtggccagtcggacagcatcatgcat
ccttccatgaatcaatcaagcattgcccaagatcgaggttatatgcagaggaacccccag
atgccccagtacagttccccccagcccggctcagccttatctccgcgtcagccttccgga
ggacagatacacacaggcatgggctcctaccagcagaactccatggggagctatggtccc
caggggggtcagtatggcccacaaggtggctaccccaggcagccaaactataatgccttg
cccaatgccaactaccccagtgcaggcatggctggaggcataaaccccatgggtgccgga
ggtcagatgcatggacagcctggcatcccaccttacggcacactccctccagggaggatg
agtcacgcctccatgggcaaccggccttatggccctaacatggccaatatgccacctcag
gttgggtcagggatgtgtcccccaccagggggcatgaaccggaaaacccaagaaactgct
gtcgccatgcatgttgctgccaactctatccaaaacaggccaccaggctaccccaatatg
aatcaagggggcatgatgggaactggacctccttatggacaagggattaatagtatggct
ggcatgatcaaccctcagggacccccatattccatgggtggaaccatggccaacaattct
gcagggatggcagccagcccagagatgatgggccttggggatgtcaagttaactccagcc
accaaaatgaacaacaaggcagacgggacacccaagacagaatccaaatccaagaaatcc
agttcttctactacaaccaatgagaagatcaccaagttgtatgagctgggtggtgagcct
gagaggaagatgtgggtggaccgttatctggccttcactgaggagaaggccatgggcatg
acaaatctgcctgctgtgggtaggaaacctctggacctctatcgcctctatgtgtctgtg
aaggagattggtggattgactcaggtcaacaagaacaaaaaatggcgggaacttgcaacc
aacctcaatgtgggcacatcaagcagtgctgccagctccttgaaaaagcagtatatccag
tgtctctatgcctttgaatgcaagattgaacggggagaagaccctcccccagacatcttt
gcagctgctgattccaagaagtcgcagcccaagatccagcctccctctcctgcgggatca
ggatctatgcaggggccccagactcctcagtcaaccagcagttccatggcagaaggagga
gacttaaagccaccaactccagcatccacaccacacagtcagatccccccattgccaggc
atgagcaggagcaattcggttgggatccaggatgcctttaatgatggaagtgactccaca
ttccagaagcggaattccatgactccaaaccctgggtatcagcccagtatgaatacctct
gacatgatggggcgcatgtcctatgagccaaataaggatccttatggcagcatgaggaaa
gctccagggagtgatcccttcatgtcctcagggcagggccccaacagcgggatgggtgac
ccctacagtcgtgctgctggccctgggctaggaaatgtggcgatgggaccacgacagcac
tatccctatggaggtccttatgacagagtgaggacggagcctggaatagggcctgaggga
aacatgagcactggggccccacagcctaatctcatgccttccaacccagactcggggatg
tattctcctagccgctaccccccgcagcagcagcagcagcagcaacgacatgattcctat
ggcaatcagttctccacccaaggtaccccttctggcagccccttccccagccagcagacc
acaatgtatcaacagcagcagcagaattacaagcggccaatggatggcacatatggccct
cctgccaagcggcatgaaggggagatgtacagcgtgccatacagcactgggcaggggcag
cctcagcagcagcagttgcccccagcccagccccagcctgccagccagcaacaagctgcc
cagccttcccctcagcaagatgtatacaaccaatatggcaatgcctatcctgccactgcc
accgctgctactgaacgccgaccagcaggcggcccccagaaccaatttccattccagttt
ggccgagaccgtgtctctgcaccccctggcaccaatgcccagcaaaacatgccaccgcaa
atgatgggcggccccatacaggcatcagctgaggttgctcagcaaggcaccatgtggcag
gggcgtaatgacatgacctataattacgccaacaggcagagcacgggctctgctccccag
ggccccgcctatcatggcgtgaaccgaacagatgaaatgctgcacacagatcagagggcc
aaccacgaaggcccgtggccttcccatggcacacgccagcccccatatggtccctctgcc
cctgtgccccccatgacaaggccccctccatctaactaccagcccccgccaagcatgcag
aatcacattcctcaggtatccagccctgctcccctgccccggccaatggagaaccgcacc
tctcctagcaagtctccattcctgcactctgggatgaaaatgcagaaggcaggtccccca
gtacctgcctcacacatagcacctgcccctgtgcagccccccatgattcggcgggatatc
accttcccacctggctctgttgaagccacacagcctgtgttgaagcagaggaggcggctc
acaatgaaagacattggaaccccggaggcatggcgggtaatgatgtccctcaagtctggt
ctcctggcagagagcacatgggcattagataccatcaacatcctgctatatgatgacaac
agcatcatgaccttcaatctcagtcagctcccagggttgctagagctccttgtagaatat
ttccgacgatgcctgattgagatctttggcattttaaaggagtatgaggtgggtgaccca
ggacagagaacgctactggatcctgggaggttcagcaaggtgtctagtccagctcccatg
gagggtggggaagaagaagaagaacttctaggtcctaaactagaagaggaagaagaagag
gaagtagttgaaaatgatgaggagatagccttttcaggcaaggacaagccagcttcagag
aatagtgaggagaagctgatcagtaagtttgacaagcttccagtaaagatcgtacagaag
aatgacccgtttgtggtggactgctcagataagcttgggcgtgtgcaggagtttgacagt
ggcctgctgcactggcggattggtgggggggacaccactgagcatatccagacccacttc
gaaagcaagacagagctgctgccttcccggcctcatgcaccctgcccaccagccccccgg
aagcatgtgacaacagcagagggtacgccagggacaacagaccaggagggacccccacct
gatggacctccagaaaaacggatcacagccactatggatgacatgttgtctactcggtct
agcaccttgaccgaggatggagctaagagttcagaggccatcaaggagagcagcaagttt
ccatttggcattagcccagcacagagccaccggaatatcaagatcctagaggacgaaccc
cacagtaaggatgagaccccactgtgtacccttctggactggcaggattctcttgccaag
cgctgtgtctgtgtctccaataccattcgaagcctgtcatttgtgccaggcaatgacttt
gagatgtccaaacacccagggctgctgctcatcctgggcaagctgatcctgctgcaccac
aagcacccagaacggaagcaggcaccactaacttatgagaaggaggaggaacaggaccaa
ggggtgagctgcaacaaagtggagtggtggtgggactgcttggagatgctccgggaaaac
accttggttacactcgccaacatctcggggcagttggacctatccccataccccgagagc
atttgcctgcctgtcctggacggactcctacactgggcagtttgcccttcagctgaagcc
caggaccccttttccaccctgggccccaatgccgtcctttccccgcagagactggtcttg
gaaaccctcagcaaactcagcatccaggacaacaatgtggacctgattctggccacaccc
cccttcagtcgcctggagaagttgtatagcactatggtgcgcttcctcagtgaccgaaag
aacccggtgtgccgggagatggctgtggtactgctggccaacctggctcagggggacagc
ctggcagctcgtgccattgcagtgcagaagggcagtatcggcaacctcctgggcttccta
gaggacagccttgccgccacgcagttccagcagagccaggccagcctccttcacatgcag
aacccaccctttgagccaactagtgtggacatgatgcggcgggctgcccgcgcgctgctt
gccctggccaaggtggacgagaaccactcagagtttactctgtacgaatcacggctgttg
gacatctcggtatcaccgttgatgaactcattggtttcacaagtcatttgtgatgtactg
tttttgattggccagtcatga
DBGET
integrated database retrieval system
