Cercocebus atys (sooty mangabey): 105597266
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Entry
105597266 CDS
T07242
Symbol
COL13A1
Name
(RefSeq) collagen alpha-1(XIII) chain isoform X1
KO
K16617
collagen type XIII alpha
Organism
caty
Cercocebus atys (sooty mangabey)
Pathway
caty04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
caty00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
105597266 (COL13A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
caty00536
]
105597266 (COL13A1)
Glycosaminoglycan binding proteins [BR:
caty00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
105597266 (COL13A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
105597266
NCBI-ProteinID:
XP_011940671
Ensembl:
ENSCATG00000042286
LinkDB
All DBs
Position
Unknown
AA seq
693 aa
AA seq
DB search
MVAESTHKAAATGACGPRELGAPGTVALAAARAERGARLPSPGSCGLLALALCSLALSLL
AHFRTAELQARVLRLEAERGEQQMETAILGRVNQLLDEKWKLHSRRRREAPKTSPGCNCP
PGPPGPTGRPGLPGDKGAIGMPGRVGVKGQPGEKGSPGDAGLSIIGPRGPPGQPGTRGFP
GFPGPIGLDGKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQCGEYPHRLLPLLNSVRLAP
PPVIKRRTFQGEQSQASIQGPPGPPGPPGPSGPLGHPGLPGPMGPPGLPGPPGPKGDPGI
QGYHGRKGERGMPGMPGKHGAKGTPGIAVAGMKGEPGIPGTKGEKGAEGSPGLPGLLGQK
GEKGDAGNSIGGGRGEPGPPGLPGPPGPKGEAGVDGQVGPPGRQGDKGEPGAAGEQGPAG
PKGSKGEPGKGEMVDYNGNINEALQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLP
GPPGHDGEKGPRGKPGDMGPPGPQGPPGKDGPPGMKGENGHPGSPGEKGEKGETGQAGSP
GEKGEAGEKGDPGAEGLQGVPGPKGEAGLDGAKGEKGVQGEKGDRGPLGLPGASGLDGRP
GPPGTPGPIGVPGPAGPKGERGSKGDPGMTGPTGAAGLPGLHGPPGDKGNRGERGKKGSR
GPKGDKGDQGAPGLDAPCPLGEDGLPVQGCWNK
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atggtagcggagagcacccacaaagcggcagccactggtgcctgcggccctagggagttg
ggcgcgcccgggacggtggctctggcggcggcgcgggcggagcgcggcgcacggctgccg
agtccagggtcgtgcgggctgctggcgctggccctctgctcgctggcactcagcctgctc
gcccactttcggacggcggagctgcaggcccgggtgctgcgcctggaagcggagcgcggg
gagcagcaaatggagacggctattttgggacgagtgaaccaactgctggacgagaaatgg
aagctccactcaaggaggcgccgggaggccccaaagacatctccaggatgtaactgcccg
ccaggacctcctggtcccactggaagacctggactcccaggggacaaaggtgccattggg
atgcctggacgtgtgggagtaaagggccaaccaggagagaaggggtcccccggagatgct
gggctgtccatcatcggcccccgaggcccccctggtcaaccaggcactcgaggttttcct
ggatttccgggtcccattgggctggatggcaaaccgggccacccaggaccaaagggcgac
atgggtctgacgggtcccccaggacagccgggacctcagggacaaaaaggagaaaagggt
cagtgtggagagtacccacaccggctgctgcctctcctcaattcagtgcgactggctcca
cccccggtcataaaaaggcggacattccagggtgaacagagccaagccagcatccaaggt
ccaccagggcccccaggcccccctggaccaagtggacctctggggcacccaggactgcca
ggacccatggggccacccggcttacctgggcctcctggaccaaagggagacccagggatc
cagggctaccacggccggaagggagaacggggcatgccagggatgcccggcaagcatgga
gccaagggcactcctggaattgccgtggctgggatgaagggcgagccagggatcccagga
accaagggtgagaagggggctgaaggctcccctgggcttcctggcctcctggggcagaag
ggagagaaaggtgatgctggcaactccattggaggaggcagaggggaacctggccctcca
gggctccctggacccccagggccaaagggagaagcgggtgtcgatggccaggtcggcccc
ccagggcggcaaggagacaagggggagcctggagcagctggagaacagggaccagctggc
cccaagggctccaagggagaaccagggaaaggagagatggtggattacaatggaaacatc
aatgaggctctccaggagatccgaacactggccttgatggggcctcctggtcttcctggg
caaattggcccacctggagctccagggattccaggccagaagggggagattggactgcca
ggccctccaggacacgatggggagaagggacctcgcggtaaaccaggagacatgggccct
cctggtccccaaggccccccaggaaaggatggacctccaggaatgaaaggagaaaacggg
cacccagggagcccaggagaaaagggagagaaaggagagacaggacaagcaggctcgccg
ggagagaaaggagaagccggggagaagggcgatccaggagcagaggggctccaaggtgtt
cctggaccaaagggggaagcaggactagatggagcaaaaggagagaaaggcgtccaggga
gaaaaaggagaccgtggtcccctgggactacccggagcttcaggtttggacggcaggcct
gggccaccgggtactccaggaccaattggagttccaggcccagcaggaccaaagggcgag
aggggcagcaaaggagaccctgggatgacaggaccaacgggagcagctgggcttcctggt
ttacatggaccacccggggacaagggaaaccggggggagagggggaagaaaggctctaga
gggcctaaaggggataagggagaccaaggagcgcctggattagatgccccctgcccgttg
ggcgaagatggcttgccagtccaaggctgctggaacaagtga
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