Cercocebus atys (sooty mangabey): 105600016
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Entry
105600016 CDS
T07242
Symbol
VARS2
Name
(RefSeq) valine--tRNA ligase, mitochondrial isoform X1
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
caty
Cercocebus atys (sooty mangabey)
Pathway
caty00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
caty00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
105600016 (VARS2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
caty01007
]
105600016 (VARS2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
caty03016
]
105600016 (VARS2)
Enzymes [BR:
caty01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
105600016 (VARS2)
Amino acid related enzymes [BR:
caty01007
]
Aminoacyl-tRNA synthetase
Class I (U)
105600016 (VARS2)
Transfer RNA biogenesis [BR:
caty03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
105600016 (VARS2)
Prokaryotic type
105600016 (VARS2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
tRNA-synt_1e
FmiP_Thoc5
tRNA-synt_1b
tRNA-synt_1f
Motif
Other DBs
NCBI-GeneID:
105600016
NCBI-ProteinID:
XP_011946117
Ensembl:
ENSCATG00000032554
LinkDB
All DBs
Position
Unknown
AA seq
1112 aa
AA seq
DB search
MSVVTAKSRHSGPVPEEPWSPWLHGAVDTMHSSPQGGKEQISAPFQTLRMPHLPLASFRP
PFWGLRHSRGLPRFHSVSTQSEPHGSPISRRNREAKQKRLREKQATLEADIAGESKSPAE
SIKAWSPKEVVLYEIPTKPGEKKDVSGPLPPAYSPRYVEAAWYPWWVREGFFKPEYQAQL
PQATGETFSMCIPPPNVTGSLHIGHALTVAIQDALVRWHRMRGDQVLWVPGSDHAGIATQ
AVVEKQLWKERGVRRHELSREAFLREVWQWKEAKGGEICEQLRALGASLDWDRECFTMDV
GSSVAVTEAFVRLYKAGLLYRNRQLVNWSCALRSAISDIEVENRPLPGCTQLRLPGCPTP
VSFGLLFSVAFPVDGEPDAEVVVGTTRPETLPGDVAVAVHPDDSRYTHLHGRQLRHPLIG
QPLPLITDYAVQPHVGTGAVKVTPAHSPADAEMGARHGLSPLNVIAEDGTMTSLCGDWLQ
GLHRFVAREKIVSVLSERGLFRGLQNHPMVLPICSRSGDVIEYLLKSQWFVRCQEMGARA
AQAVESGALELSPSFHQKNWQHWFSHIGDWCVSRQLWWGHQIPAYLVVEDHAQGEEDCWV
VGRSEAEAREVAAELTGRPGAELALERDPDVLDTWFSSALFPFSALGWPQETSDLARFYP
LSLLETGSDLLLFWVGRMVMLGTQLTGQLPFSKVLLHPMVRDRQGRKMSKSLGNVLDPRD
IISGVEMQVLQEKLRSGNLDPAELAIVAAAQKKDFPHGIPECGTDALRFTLCSHGVQGGD
LRLSVSEVQSCRHFCNKIWNALRFILNALGEKFVPQPAEELSPSSHMDAWILSRLALAAR
ECERGFLTRELSLVTHALHHFWLHNLCDVYLEAVKPVLWHSPRPPGPPQVLFSCADIGLR
LLAPLMPFLAEELWQRLPPRPGCPPAPSISVAPYPSTCSLEHWRQPELERRFSRVQEVVQ
VLRALRATYQLTKARPRVLLQSSEPGDQGLFEAFLEPLGTLGHCGAVGLLPPGAAAPSGW
AQAPLSDTVQVYMELQGLVDPQIQLPLLAARRSKLQKQLDGLMARTPSEGEAGTQRQQRL
SSLQLELSKLDKAASHLRQLMDEPPAPGSPEL
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtggtcaccgctaagtccagacactccggtcctgttccggaagagccctggtct
ccgtggctccatggcgctgtcgacaccatgcactctagccctcaaggaggaaaagaacag
atctcagcccctttccaaacactccggatgcctcatttgcctctcgcctcttttcgacca
ccattttgggggctgaggcactcacggggcctccccaggtttcattccgtttctacacag
tcggagccccatggatctcctatctcccggaggaaccgtgaagccaaacagaaacgcctg
cgagagaagcaggcgactctggaggctgacatagcgggggagagcaagtcacctgcagaa
tccattaaggcctggagtcctaaggaggtagtattgtatgaaatccctacgaaacccggt
gaaaagaaagatgtctctgggcccctgccgcctgcatacagtccccgatatgttgaggct
gcctggtacccgtggtgggtacgagagggcttcttcaaaccagaatatcaggcccagctg
ccccaagctacaggggagaccttttccatgtgtatcccacctcccaatgtcactggctcc
ctgcacattggccacgcactcacggtggccatacaggatgccctcgtgcgctggcaccgg
atgcgtggggatcaagtgctgtgggtccctggttcagatcacgcaggaatcgctacacaa
gctgtggtggagaaacaactgtggaaggaacggggagtgaggagacatgagctgagccgg
gaggccttccttagggaggtgtggcagtggaaggaggcgaaaggtggagagatctgtgag
cagctgcgagctctgggtgcctccctggactgggaccgagagtgttttaccatggatgtt
ggctcctcagtggctgtgactgaagcttttgtgcggctctacaaggcggggttgctgtac
cggaaccgtcagcttgtcaactggtcatgcgctttaagatcagccatctcggacattgag
gtggagaaccggcccctgcctggctgtacacagcttcgactgcctggctgccctacccct
gtgtcttttggcctcctattttctgttgccttccctgtggatggagagcctgatgcagag
gttgtggtaggaaccacgaggccagagacgctgcctggagacgtggctgtggccgttcat
ccagacgactcgagatacacgcatctacatgggcgacagcttcgtcaccccttgataggg
cagcctcttcccctcatcacagattatgctgttcagccacatgtgggcacaggggcagtg
aaggtgactccagctcacagtcctgccgatgctgagatgggggcccgacatggcttgagc
cctctgaatgtcattgcggaggatggaaccatgacctccctctgcggggactggctgcag
ggtcttcaccggtttgtggcccgggaaaagatagtgtctgtgctgagtgaacggggcctg
ttccggggcctccagaaccaccccatggtactgcccatctgcagccgttctggggatgtg
atagaatacctgctgaagagccagtggtttgtccgctgccaggaaatgggggcccgagct
gcccaggctgtggagtcgggggccctggagctcagtccctccttccaccagaagaactgg
cagcactggttttcccatattggggactggtgtgtctcccggcagctgtggtggggccat
cagattccagcctacctggttgtagaggaccacgcgcagggagaagaggactgttgggtg
gttgggcgttcagaggctgaggccagagaggtagcagcagaactgacagggaggccaggg
gcagagctggccctggagagggaccctgatgtcctggacacttggttctcttctgccctg
ttccccttttctgccctgggctggccccaagagacctcagaccttgctcgtttctacccg
ctgtcacttctggaaacgggcagtgaccttctgctgttctgggtgggccgcatggtcatg
ttggggacccagctcacagggcagctgcccttcagcaaggtgcttcttcatcccatggtt
cgggacaggcagggccggaagatgagcaagtccctggggaatgtgctggacccaagagac
atcatcagtggggtggagatgcaggtgctgcaggaaaagctgagaagtggaaatttggac
cccgcagagctggccattgtggctgcagcacagaaaaaggactttcctcatgggatccct
gagtgtgggacagatgccctgagattcacactctgctcccatggagttcaggggggcgac
ttgcgcctgtcagtctctgaggtccagagctgccgacatttctgcaacaagatctggaat
gctctgcgctttatcctcaatgccttaggggagaaatttgtgccacagcctgctgaggag
ctgtctccctcctcccacatggacgcctggatcctgagccgccttgccctggccgcccgg
gagtgtgagcggggcttcctcacccgagagctctcgctcgtcactcacgccctgcaccac
ttctggctccacaacctctgtgatgtctacctggaggctgtgaagcctgtgctgtggcac
tcaccccgccccccagggccccctcaggtcctgttctcctgcgctgacatcggcctccgc
ctcttggccccactgatgcccttcctggctgaagagctgtggcagaggctgccccccagg
cctggttgtccccctgcccccagcatctcggttgccccctaccccagcacctgcagcttg
gagcactggcgccagccggagctggagcggcgcttctcccgggtccaagaggttgtgcag
gtgctaagggctctccgagccacgtatcagctcaccaaagcccggccccgagtgctgctg
cagagctcagagcctggggaccagggcctctttgaggccttcttggagcccctgggcacc
ctgggccactgtggggctgtgggcctgttacccccaggcgcagcagctccctccggctgg
gcccaggctccactcagtgacacggttcaggtctacatggagctgcagggcctggtggac
ccccagatccagctacctctgttagccgcccgaaggtccaagttgcagaagcagcttgat
ggcctcatggccaggaccccatcagaaggggaggcagggactcagaggcaacaaaggctt
tcttccctccagctggaattgtcaaaactggacaaggcggcctctcacctccggcagctg
atggatgagcctccagccccagggagcccggagctctaa
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