Cercocebus atys (sooty mangabey): 105600323
Help
Entry
105600323 CDS
T07242
Symbol
ABCA1
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-binding cassette sub-family A member 1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
caty
Cercocebus atys (sooty mangabey)
Pathway
caty02010
ABC transporters
caty04148
Efferocytosis
caty04975
Fat digestion and absorption
caty04979
Cholesterol metabolism
caty05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
caty00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
105600323 (ABCA1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
105600323 (ABCA1)
09150 Organismal Systems
09154 Digestive system
04975 Fat digestion and absorption
105600323 (ABCA1)
04979 Cholesterol metabolism
105600323 (ABCA1)
09160 Human Diseases
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
105600323 (ABCA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
caty02000
]
105600323 (ABCA1)
Transporters [BR:
caty02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
105600323 (ABCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DrrA1-3_C
AAA_23
Motif
Other DBs
NCBI-GeneID:
105600323
NCBI-ProteinID:
XP_011946774
Ensembl:
ENSCATG00000034485
LinkDB
All DBs
Position
Unknown
AA seq
2323 aa
AA seq
DB search
MACWPQLRLLLWKNLTFRRRQTCQLLLEVAWPLFIFLILISVRLSYPPYEQHECHFPNKA
MPSAGTLPWVQGIICNANNPCFRYPTPGEAPGVVGNFDKSIVSRLFSDARKLLLYSQKDT
SMKDMRKVLRTLQQIKKSSSNLKLGSVQWRPTSPVDSTAQAYAVISAGPLGSCFCAPAGK
FILFFPSVASAKFIGLSPDDLYFRISRWTMKPFSRLSPHSVTCPRPQSTVDKMLRADVAI
LHKVFLQGYQLHLTSLCNGSKSEEVIQLGDQEVSELCGLPREKLAAAGQVLHSNVDILKP
ILRGLNSSSPLPSKELAEATKTLLHSLGTLAQELFSMRSWSDMRQEVMFLTNVNSSSSST
QIYQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGGNGTEEDAETFYDNSTTPYCNDL
MKNLESSPLSRIIWKALKPLLVGKILYTPDTPATRQVMAEVNKTFQELAVFHDLEGMWEE
LSPKIWTFMENSQEMDLVRTLLDSRGNDHFWEQQLDGLDWTAQDIVAFLAKHPEDVQSSN
GSVYTWREAFNETNQAIRTISRFMECVNLNKLEPIATEVRLINKSMELLDERKFWAGIVF
TGITPGSIELPHHVKYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDMRYVWGGFAYLQD
VVEQAIIRVLTGTEKKTGVYMQQMPYPCYVDDIFLRVMSRSMPLFMTLAWIYSVAVIIKG
IVYEKEARLKETMRIMGLDNSILWFSWFISSLIPLLVSAGLLVVILKLGNLLPYSDPSVV
FVFLSVFAVVTILQCFLISTLFSRANLAAACGGIIYFTLYLPYVLCVAWQDYVGFTLKIF
ASLLSPVAFGFGCEYFALFEEQGIGVQWDNLFESPMEEDGFNLTTSVSMMLFDTFLYGVM
TWYIEAVFPGQYGIPRPWYFPCTKSYWFGEESDEKSHPGSNQKRMSEICMEEEPTHLKLG
VSIQNLVKVYRDGMKVAVDGLALNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAY
ILGKDIRSEMSTIRQNLGVCPQHNVLFDMLTVEEHIWFYARLKGLSEKHVKAEMEQMALD
VGLPSSKLKSKTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLLKY
RQGRTIILSTHHMDEADVLGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKKDVESS
LSSCRNSSSTVSYLKKEDSVSQSSSDAGLGSDHESDTLTIDVSAISNLIRKHVSEARLVE
DIGHELTYVLPYEAAKEGAFVELFHEIDDRLSDLGISSYGISETTLEEIFLKVAEESGVD
AETSDGTLPARRNRRAFGDKQSCLRPFTEDDAVDPNDSDIDPESRETDLLSGMDGKGSYQ
VKGWKLTQQQFVALLWKRLLIARRSRKGFFAQIVLPAVFVCIALVFSLIVPPFGKYPSLE
LQPWMYNEQYTFVSNDAPEDTGTLELLNALTKDPGFGTRCMEGNPIPDMPCQAGEEEWTT
APVPQTIKDLFQNGNWTMQNPSPACQCSSDKIKKMLPVCPPGAGGLPPPQRKQNTADILQ
DLTGRNISDYLVKTYVQIIAKSLKNKIWVNEFRYGGFSLGVSNTQALPPSQEVNDAIKQM
KKHLKLAKDSSADRFLNSLGRFMTGLDTKNNVKVWFNNKGWHAISSFLNVINNAILRANL
QKGENPSHYGITAFNHPLNLTKQQLSEVALMTTSVDVLVSICVIFAMSFVPASFVVFLIQ
ERVSKAKHLQFISGVKPVIYWLSNFVWDMCNYVVPATLVIIIFICFQQKSYVSSTNLPVL
ALLLLLYGWSITPLMYPASFVFKIPSTAYVVLTSVNLFIGINGSVATFVLELFTDNKLNN
INDILKSVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFVSPLSWDLVGRNLFAMAV
EGVVFFLITVLIQYRFFIRPRPVNAKLPPLNDEDEDVRRERQRILDGGGQNDILEIKELT
KIYRRKRKPAVDRICVGIPPGECFGLLGVNGAGKSSTFKMLTGDTTVTRGDAFLNKNSIL
SNIHEVHQNMGYCPQFDAITELLTGREHVEFFALLRGVPEKEVGKVGEWAIRKLGLVKYG
EKYAGNYSGGNKRKLSTAMALIGGPPVVFLDEPTTGMDPKARRFLWNCALSVVKEGRSVV
LTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIVVRIAGSNPDLKPVQDF
FGLAFPGSVLKEKHRNMLQYQLPSSLSSLARIFSILSQSKKRLHIEDYSVSQTTLDQVFV
NFAKDQSDDDHLKDLSLHKNQTVVDVAVLTSFLQDEKVKESYV
NT seq
6972 nt
NT seq
+upstream
nt +downstream
nt
atggcttgttggcctcagctgaggttgctgctgtggaagaacctcactttcagaagaaga
caaacatgtcagctgctgctggaagtggcctggcctctatttatcttcctgatcctgatc
tctgttcggctgagctacccaccctatgaacaacatgaatgccattttccaaataaagcc
atgccctctgcaggaacacttccttgggttcaggggattatctgtaatgccaacaacccc
tgtttccgttacccgactcctggggaggctcccggagttgttggaaactttgacaaatcc
attgtgtctcgcctgttttcagatgctcgcaagcttcttttatacagccagaaagacacc
agcatgaaggacatgcgcaaagttctgagaacattacagcagatcaagaaatccagctca
aacttgaagcttggatcagtccagtggagaccaacctctcctgtagactctaccgctcag
gcctatgctgtaatcagtgctgggccactgggctcctgcttctgtgctccagctggaaag
tttatcttgttctttccttcagttgcatctgctaaattcattggactatccccagatgat
ctgtacttcaggatttctcggtggacaatgaaacctttctcgcggctctctcctcattcc
gtaacctgtcctcgtccacaatctactgtggacaagatgctgagggctgatgtagcaatt
ctccacaaggtatttttgcaaggctaccagttacatttgaccagtctgtgcaacggatca
aaatcagaagaggtgattcaacttggtgaccaagaagtttccgagctttgtggcctacca
agggagaaactggctgcagcggggcaggtacttcattccaacgtggacatcctgaagcca
atcctgagaggactaaactcttcatctcccctgccgagcaaggagctggctgaagccaca
aaaacattgctgcatagtcttgggactctggcccaggagctgttcagcatgagaagctgg
agtgacatgcgacaggaggtgatgtttctgaccaatgtgaacagctccagctcttccacc
cagatctaccaggctgtgtctcgtattgtctgcgggcatcccgagggaggggggctgaag
atcaagtctctcaactggtatgaggacaataactacaaagccctcttcggaggcaatggc
actgaggaagatgctgaaaccttctacgacaactctacaactccttactgcaatgatttg
atgaagaatttggagtctagtcctctttcccgcattatttggaaagctctgaagcctctg
cttgttgggaagatcctgtatacacctgacactccagccacaaggcaggttatggctgag
gtgaacaagaccttccaggaattggctgtgttccatgatctggaaggcatgtgggaggaa
ctcagccccaagatctggaccttcatggagaacagccaagaaatggaccttgtccggacg
ctgttggacagcaggggcaatgaccacttttgggaacagcagttggatggcttagattgg
acagcccaagacattgtggcgtttttggccaagcacccagaggatgtccagtccagtaat
ggttctgtgtacacctggagagaagctttcaacgagactaaccaggcaatccggaccata
tctcgcttcatggagtgtgtcaacctgaacaagctggaacccatagcaacagaagtccgg
ctcattaacaagtccatggagctgctggatgagaggaagttctgggctggtattgtgttc
actggaattactccaggcagcattgagctgccccaccatgtcaagtacaagatccgaatg
gacattgacaacgtggagaggacaaataaaatcaaggatgggtactgggaccctggtcct
cgagctgacccctttgaggacatgcggtacgtctggggcggcttcgcctacttgcaggat
gtggtggaacaggcaatcatcagggtgctgacaggcaccgagaagaaaactggtgtctat
atgcaacagatgccctatccctgttatgttgatgacatctttttgcgggtgatgagccgg
tcaatgcccctcttcatgacactggcctggatttactcagtggctgtgatcatcaagggc
attgtgtatgagaaggaggcgcggctgaaagagaccatgcggatcatgggcctggacaac
agcatcctctggtttagctggttcattagtagcctcattcctcttcttgtgagcgctggc
ttgctggtggtcatcctgaagttaggaaacctgctgccctacagtgaccccagcgtggtg
tttgtcttcctgtccgtgtttgctgtggtgaccatcctgcagtgcttcctgattagcaca
ctcttctccagagccaacctggcggcagcctgtgggggcatcatctacttcacgctgtac
ctgccctacgttctgtgtgtggcgtggcaggactatgtgggcttcacactcaagatcttc
gctagcctgctgtctcctgtggctttcgggtttggctgtgagtactttgccctttttgag
gagcagggcattggagtgcagtgggacaacctgtttgaaagtcctatggaggaagatggc
ttcaatctcaccacttcagtttccatgatgctgtttgacaccttcctctatggggtgatg
acttggtacatcgaggctgtctttccaggccagtacggaattcccaggccctggtatttt
ccttgcaccaagtcctactggtttggtgaggaaagtgatgagaagagccaccctggttcc
aaccagaagagaatgtcagaaatctgcatggaggaggagcccacccatctgaagctgggc
gtgtccattcagaacctggtaaaagtctaccgagatgggatgaaggtggctgtcgatggc
ctggcactgaatttttatgagggccagatcacctccttcctgggccacaatggagcgggg
aagacgaccaccatgtcaatcctgactgggttgttccccccgacctcgggcacagcctac
atcctgggaaaagacattcgctctgagatgagcactatccggcagaacctgggggtctgt
ccccagcataatgtgctatttgacatgctgactgtcgaagaacacatctggttctatgcc
cgcctgaaagggctctccgagaagcatgtgaaggcggagatggagcagatggccctggat
gttggtttgccatcaagcaagttgaaaagcaaaacaagccagctgtcaggtggaatgcag
agaaagctgtctgtggcgttggcctttgtcgggggatccaaggtcgtcattctggatgaa
cccacagctggtgtggacccttactcccgcaggggaatatgggagctgctgctgaaatac
cgacaaggccgcaccattattctctccacacaccacatggatgaagcggacgtcctgggg
gacaggattgccatcatctcccatgggaagctgtgctgtgtgggctcctccctgtttctg
aagaaccagctgggaacaggctactacctgaccctggtcaagaaagatgtggaatcctcc
ctcagttcctgcagaaacagtagtagcactgtgtcatacctgaaaaaggaggacagtgtt
tctcagagcagttctgatgctggcctgggcagcgaccatgagagtgacacgctgaccatc
gatgtgtctgctatctccaacctcatcaggaagcatgtgtctgaagcccggctggtggaa
gacatagggcatgaactgacctacgtgctgccatatgaagctgctaaggagggggccttt
gtggaactctttcatgagattgatgaccggctctcagacctgggcatttctagttatggc
atctcagagacgaccctggaagaaatattcctcaaggtggccgaagagagtggggtggat
gctgagacctcagatggtaccttgccagcaagacgaaacaggcgggccttcggggacaag
cagagctgtcttcgcccattcactgaagatgatgctgttgatccaaatgattctgacata
gacccagagtccagagagacagacttgctcagcgggatggatggcaaaggctcctaccag
gtgaagggctggaagcttacacagcaacagtttgtggcccttttgtggaagagactgcta
attgccagacggagtcggaaaggattttttgctcagattgtcttgccagctgtgtttgtc
tgcattgcccttgtgttcagcctgatcgtgccaccctttggcaagtaccccagcctggaa
cttcagccctggatgtacaacgaacagtacacatttgtcagcaatgatgctcctgaggac
acgggaaccctggaactcttaaacgccctgacgaaagaccctggcttcggcacccgctgt
atggaaggaaaccccatcccagacatgccctgccaggcaggggaggaagagtggaccact
gccccagttccccaaaccatcaaggacctcttccagaatgggaactggacgatgcagaat
ccttcacctgcatgccaatgtagcagcgacaaaatcaagaagatgctgcccgtgtgtccc
ccaggggcaggggggctgcctcctccgcaaagaaaacaaaacactgcagatatccttcag
gacctgacgggaagaaacatttcggattatctggtgaagacgtatgtgcagatcatagcc
aaaagcttaaagaacaagatctgggtgaatgagtttaggtatggcgggttttccctgggt
gtcagtaatactcaagcacttcctccgagtcaagaagttaatgatgccatcaaacaaatg
aagaaacacctaaagctggccaaggacagttctgcagatcgatttctcaacagcttggga
aggtttatgacaggactggacaccaaaaataatgtcaaggtgtggttcaataacaagggc
tggcatgcaatcagctctttcctgaatgtcatcaacaatgccattctccgggccaacctg
caaaagggagagaaccctagccattatggaattactgctttcaatcatcccctgaatctc
accaaacagcagctctcagaggtggctctgatgaccacatcagtggatgtccttgtgtcc
atctgcgtcatctttgcgatgtccttcgtcccagccagctttgtcgtattcctgatccag
gagcgggtcagcaaagcaaaacacctgcagttcatcagtggcgtgaagcctgtcatctac
tggctctctaattttgtctgggatatgtgcaattacgttgtccctgccacactggtcatt
atcatcttcatctgcttccagcagaagtcctatgtgtcctccaccaacctgcctgtgcta
gcccttctacttttgctgtatgggtggtcaatcacacctctcatgtacccagcctccttc
gtgttcaagatccccagcacagcctatgtggtgctcaccagcgtgaacctcttcatcggc
atcaatggcagcgtggccacctttgtgttggagctcttcaccgacaataagctgaataat
atcaatgatatcctgaagtctgtgttcttgatcttcccacatttttgcctgggacgaggg
ctcattgacatggtgaaaaaccaggcaatggctgatgccctggaaaggtttggggagaac
cgctttgtgtcaccattatcttgggacttggtgggacgaaacctcttcgccatggccgtg
gaaggggtggtgttcttcctcattactgttctgatccagtacagattcttcatcaggccc
agacctgtaaatgcaaagctccctcctctgaatgatgaagatgaagatgtgaggcgggaa
agacagagaattcttgatggtggaggccagaatgacatcttagaaatcaaggagttgacg
aagatatatagaaggaagcggaagcctgctgttgacaggatttgtgtgggcattcctcct
ggtgagtgctttgggctcctgggagttaatggggctggaaaatcatcaactttcaagatg
ttaacaggagataccactgttaccagaggagatgctttccttaacaaaaatagtatctta
tcaaacatacatgaagtacatcagaacatgggctactgccctcagtttgatgccatcaca
gagctgctgactgggagagaacacgtggagttctttgcccttttgagaggagtcccagag
aaagaagttggcaaggttggtgagtgggcgattcggaaactgggcctcgtgaagtatgga
gaaaaatatgctggtaactacagtggaggcaacaagcgcaagctctctacagccatggct
ttgatcggcgggcctcctgtggtgtttctggatgaacccaccacaggcatggatcccaaa
gcccggcggttcttgtggaattgtgccctaagtgttgtcaaggaggggagatcagtagtg
cttacatctcatagtatggaagaatgtgaagctctttgcactaggatggcaattatggtc
aatggaaggttcaggtgccttggcagtgtccagcatctaaaaaataggtttggagatggt
tatacaatagtagtacgaatagcagggtccaacccggacctgaagcctgtccaggatttc
tttggacttgcctttcctggaagtgttctaaaagagaaacaccggaacatgctacaatac
cagcttccatcttcgttatcttctctggccaggatattcagcatcctctcccagagcaaa
aagcgactccacatagaagactactctgtttctcagacaacacttgaccaagtatttgtg
aactttgccaaggaccaaagtgatgatgaccacttaaaggacctctcattacacaaaaac
cagacagtagtggatgttgcggttctcacatcttttctacaggatgagaaagtgaaagaa
agctatgtatga
DBGET
integrated database retrieval system
