Chloroflexus aurantiacus: Caur_0873
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Entry
Caur_0873 CDS
T00639
Name
(GenBank) DNA-directed RNA polymerase, beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
cau
Chloroflexus aurantiacus
Pathway
cau03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cau00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Caur_0873
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cau03021
]
Caur_0873
03400 DNA repair and recombination proteins [BR:
cau03400
]
Caur_0873
Enzymes [BR:
cau01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Caur_0873
Transcription machinery [BR:
cau03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Caur_0873
DNA repair and recombination proteins [BR:
cau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Caur_0873
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Motif
Other DBs
NCBI-ProteinID:
ABY34106
UniProt:
A9WH11
LinkDB
All DBs
Position
complement(1198894..1203405)
Genome browser
AA seq
1503 aa
AA seq
DB search
MLEINDFNAIRISLASPEDIRSWSHGEVTKPETINYRTLKPERDGLFCERIFGPTKDWEC
FCGKYKRVRYKGVVCDKCGVEVTRSKVRRERMGHINLASPVSHIWFVKGTPSRLGLLLDI
SPRNLERVLYFASYIIVEVKEDMLQVAREMIQEEYAARRQKIQKQAEEKRIELSTQLTQD
LGGMETAQRSTQRQIEEEYRRLRDEIASEAEQLRERLEELSGTLADEDILFRGVTVVEEG
EPINENTLDQLDELVEQELEVLEERRRRDLADAELLTDAERERKAYEATQEQERLQERLQ
RELDHLMREEKEKLEQLDTLKVGRIITETEYRQLRDIAPGVFRADMGAGAVRELIEKTVN
LDKLAEELQAEIQSSQGQRRKKATKRLRVVEAFRKSGNRPEWMILTVLPVIPPDLRPMVQ
LDGGRFATSDLNDLYRRVINRNNRLKRLIELNAPEIIVRNEKRMLQEAVDALIDNGRRGR
AVSGKGKHRLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPNLQLHQCGLPKKMAL
ELFKPFVMRRLVERGVAHNIKNAKRAVERVRPEVWDALEEVIKDYLVLLNRAPSLHRLSI
QAFEAKLIEGSAIQLHPLVCAAFNADFDGDQMAVHVPLSRKAQEEARTRMLSKYNLLSPA
HGEPIITPSQDIVLGCYYLTMVRDGAKGSGKRFSSIDEAMLAYEKHLLDIQAPIWIRMTG
TLSGKSDRPVRELPLAADGTPRMLIETTIGRILLNNELQPPLRFRNRLIDKKGLKEIIAD
CYQYYTNLRNLSEDQLNEVRASHGNKHVQELARIYGSEMTAQQADRIKALGFRYATLGGM
TIGIEDIEVPAKKYDIVREAEQLVADVEKQFRRGLITEEERYQEVVRIWQEATKQTIQAV
KENLNPFGPVAMMSTSGARGNINQISQMAGMRGLMSDPTGRIIELPIKANFREGLSVLDY
FVSTHGVRKGLADTALRTADAGYLTRRLVDVAQDVIITIEDCGTEEGLWLHGADDDELME
KLQVRMLGRILAAPIYHKETGELIADRNTEIDEELATAILASGQESVFVRSPLSCQAEHG
LCRLCYGRNLATGKLVEIGEAVGIIAAQSIGEPGTQLTLRTFHTGGVASADDITQGLPRV
QEIFEARVPKGKALLAEIDGVVQIVRDEEGVRTIRIVSTDVYTDEYPLGRGFSPTINHES
EVYEGQVIAEGPGGAQIVTRLTGKAFIQGDRIIVSQEDHQERELVVPHNARIRVENGERV
MAGQQLTDGSANPQELLELQGREAVQRYLVNEAQKVYRSQGVNINDKHIEVIVRQMLRRV
RIEDPGDTGLLPGELIDSAEFRRLNNDIVSQGGDPATAATMLLGITKASLNTDSFLAAAS
FQETTRVLTDAAIQGKVDYLRGLKENVVIGKLIPAGTGIEKRIERPHEDLIGEMARMLEE
SQQAEEAPAETRRATPLPTPNGNKAPESDNDALLRARLEELLSGDGDNDQSDAEEEDNDL
PAF
NT seq
4512 nt
NT seq
+upstream
nt +downstream
nt
atgctggaaattaacgacttcaacgccattcggattagcctcgcctcacccgaagacatc
cgatcgtggtcgcacggcgaagtcacgaagcctgaaactatcaactatcgcacgctcaaa
cctgaacgtgatggtttgttctgcgaacgcattttcggcccaaccaaggactgggaatgc
ttctgtggtaagtacaaacgtgtgcgctacaaaggtgtggtctgcgacaaatgtggtgtc
gaagttactcgctcgaaggtacgccgcgagcgtatgggccacatcaacctggcctcaccg
gtcagccatatctggttcgtcaaaggaacgccgtcacggcttggtcttttactcgacatc
tcgccacgcaaccttgagcgcgtgctctacttcgcttcgtacatcattgtcgaagtgaaa
gaagatatgctccaggttgcccgtgagatgatccaggaagagtatgccgctcgtcgccag
aagatacagaagcaggctgaggagaagcgcatcgagctaagcactcagttgacgcaagac
cttggcgggatggagacggcccaacggagcacccagcgccagattgaagaagagtatcgc
cgtctgcgtgatgagatcgccagcgaggccgaacaactccgtgagcggttagaggaactc
agtggtacgctggccgatgaggatattctcttccgtggcgtcaccgtcgttgaagagggt
gaaccgatcaacgaaaacacccttgaccagctcgacgagctggttgagcaggagcttgag
gtgctcgaagagcggcgccggcgcgatctggccgatgctgagttgctcaccgatgccgag
cgtgagcgcaaagcctacgaggcgacccaggagcaagagcgactgcaagagcgactccag
cgcgaactcgatcatctcatgcgcgaggagaaggagaagctcgaacaacttgacacgctc
aaagttggacggattatcaccgaaactgagtatcgccagttgcgcgacatcgctcccggt
gtcttccgcgccgatatgggtgccggtgcggtgcgggaattgatcgaaaagacggtcaat
ctcgacaaactggccgaagaattgcaggccgagattcagtcctcgcagggacaacggcgg
aagaaggctaccaagcgtctgcgcgtggtggaggcgttccgcaagagtggtaatcgtccc
gaatggatgatccttaccgtgctgccggtgattccgcccgatctgcgcccgatggtgcag
ctcgacggtggccgctttgcgaccagcgatctgaacgatctctatcgccgggtgatcaac
cggaataaccgcttgaagcgcctgattgaactcaacgcgccggaaatcatcgtgcgcaac
gagaagcgcatgctgcaagaggcggttgatgcgctgattgataatggtcgtcgcggtcgg
gccgtgagcggtaaaggcaagcaccgcctgaagagcctgagcgatatgctcaagggtaag
cagggtcgcttccgccagaacctgctcggtaagcgcgttgactattcgggccgctcggtg
atcgtggtcgggccgaacctgcaactacaccagtgtggtctgcccaagaagatggcgctt
gagctgtttaagccctttgtgatgcgccgccttgtcgagcgtggcgtagctcataatatc
aagaacgccaagcgcgctgtcgagcgtgtgcgccccgaagtgtgggacgccctcgaagag
gtgattaaagactatctggtgctgctcaatcgtgcaccatcgctgcaccggctctcaatt
caagcgttcgaggccaaactgatcgaaggatcggccattcagctccatccgctcgtctgt
gccgccttcaacgctgacttcgacggtgaccagatggcggtacacgtaccgctgtcgcgc
aaagctcaggaagaggcgcgcacgcggatgctgagcaagtataacctgcttagcccggcc
cacggtgaaccgatcatcaccccctcgcaagacatcgtgttagggtgctactacctgacc
atggtgcgtgacggtgcaaagggatcggggaagcgcttctcctccatcgacgaggcgatg
ctggcttacgagaagcatctactcgacatccaggccccgatctggattcggatgaccgga
acgctgtcgggtaagagtgatcgcccggtgcgcgagctacccctggctgctgacggcacg
ccgcgcatgctgatcgaaaccacgattgggcgtattctgctcaataatgaattgcaaccg
ccattgcgtttccgcaaccgcctgatcgacaagaaagggctgaaggagatcatcgccgat
tgctatcagtactacaccaatctgcgcaatctgagcgaagatcagctcaatgaagtacgg
gcttcccacggcaacaagcacgtgcaggaactggcccgtatctacggctcggagatgact
gctcagcaggccgaccgcatcaaggcgctcggtttccgctatgctacgttgggcggtatg
acgattggtatcgaagatattgaagtaccggccaagaaatacgatatcgttcgtgaagcc
gagcagttggtggccgatgttgaaaagcagttccgtcgcggtctgattaccgaagaggaa
cggtatcaagaggttgtgcgtatctggcaagaggctaccaagcagaccattcaggcggtt
aaggaaaacctcaatccctttggcccggtggcgatgatgtccacctccggcgctcgtggt
aacatcaaccagatctcgcagatggccggtatgcgtggcctgatgtcagacccgaccggt
cggattatcgagctgccgattaaagccaacttccgcgaaggcctctcggtgctcgactac
ttcgtctcgacccacggtgttcgcaaaggtctggccgacaccgcactccgtaccgctgac
gccggttatctgacccgccgattggttgatgtggcccaggatgtcatcatcaccatcgaa
gactgtggtaccgaagagggattgtggctccacggtgccgatgatgatgagctgatggag
aagctccaggtacgcatgttgggtcgtatcctggccgcgccgatctatcacaaagagact
ggtgaactgattgccgaccgcaacaccgagatcgacgaagagctggctactgctattctg
gccagcggtcaggagtcggtcttcgttcgctcaccgctcagttgtcaggccgaacatggt
ctctgccggctgtgctacgggcgcaacctggcaaccggcaagctggtcgagatcggcgaa
gcagttgggattattgctgcccagtcgattggtgagccgggcacccagcttacgctgcgc
accttccacaccggtggtgttgcgtcagccgacgacatcacgcagggtctgccgcgtgtg
caggagattttcgaggccagagtaccgaagggcaaagcactcctggccgagattgacggt
gtcgtccagattgtgcgtgacgaagagggtgtccgtaccattcgcatcgtctcaaccgat
gtttacaccgatgaatacccgcttggtcgcggcttcagcccaaccatcaaccacgagagc
gaggtgtatgaagggcaggttatcgccgaagggccgggtggtgctcagatcgtaacccgt
ctgaccggcaaagccttcattcaaggcgaccggatcatcgtcagccaggaagatcaccag
gaacgtgaactggtggtaccgcacaatgcccgcatccgggtagaaaacggtgagcgggtg
atggccggtcagcaactaaccgacggtagtgcgaatccgcaagagctgctcgaactgcaa
ggccgcgaggcggtgcagcgctatctggtcaatgaagcgcaaaaggtctaccgctcacaa
ggcgttaacatcaacgacaaacacatcgaggtcattgtacggcagatgttgcgccgggtg
cggattgaagacccaggcgataccggtctcttgccgggtgagctgatcgatagcgccgag
ttccgccgtctcaacaacgacattgtcagccagggtggcgatccggcaactgcggcgacg
atgctgctcggtatcaccaaagcctcgctcaacaccgacagcttcctggctgccgcctcc
ttccaggagacaacgcgagtgctgaccgatgccgccattcagggtaaggttgactacctg
cgtggtctgaaggagaatgtcgtcatcgggaaactcattcctgccggtaccgggatcgag
aagcggatcgaacgtccgcacgaggatctgatcggcgagatggctcgcatgctcgaagaa
tcgcagcaggcggaagaagcccccgccgagacccggcgagcgacaccattgccgacgcca
aatgggaacaaagccccagaaagcgacaacgacgcactcttacgggcacgactggaagag
ttgctgagtggtgatggcgataacgatcagagtgatgctgaggaagaagataacgacttg
ccggcattctag
DBGET
integrated database retrieval system
