Chloroflexus aurantiacus: Caur_1134
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Entry
Caur_1134 CDS
T00639
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
cau
Chloroflexus aurantiacus
Pathway
cau03410
Base excision repair
cau03430
Mismatch repair
cau03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Caur_1134
03430 Mismatch repair
Caur_1134
03440 Homologous recombination
Caur_1134
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cau03400
]
Caur_1134
DNA repair and recombination proteins [BR:
cau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Caur_1134
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Caur_1134
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Caur_1134
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
ABY34364
UniProt:
A9WJ87
LinkDB
All DBs
Position
complement(1578966..1580678)
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AA seq
570 aa
AA seq
DB search
MSARRQRWEIRPPAPTSFVEQLGLHPLLAHLLYQRGLHEPSIARAFLNADYSSGLHDPFA
MRGMAAAAGRIAEAIERGELIAVYGDFDVDGITAVALLTQAIKAMGGRIRPYIPHRAREG
YGLNNLAISQLVADGVTLLITVDCGISNYAEVAEANRLGLDVIVTDHHHPPMLLPPALAI
VNPRQPDCAYPFKGLVGVGIAFKVVQALARYGKRPAGLRGRDLLDLVALGTVADMGPLHD
ENRVLVRAGLIALNESSRPGVLALVAAAGLSPGMIDSGAIAFALAPRLNAAGRLADARRA
YELLLADERMKADLLAAELNTTNRERQALTRQLYAMAETMVMQSGRTEHPLIVVSHPGFN
AGVIGLVAARLVETYHRPVIVIEQGEETSRGSARSIPGFSIIDLFDQCADLFVRYGGHAA
AAGFTISTNQITALEQRLLALGSQHLSAEQLVPRLLIDATVPLSDLSWDLYATLCQLEPF
GQGNPQPVFMTPNVTVIDPQPTTDGNHLRMRVRVGQTSFEAIGFHFGRFADALRRHPNID
LAYQLAVDEWNGQRRLRLLVRDFRRATKSE
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgtcagctcgccgtcagcgctgggagatccgtccgccagcacccacttctttcgttgag
caacttggtctgcacccgttgcttgcacaccttctttatcagcgtggcttgcatgagcca
tccatcgccagagcttttcttaacgctgattacagctccggcctgcacgatccgtttgcc
atgcgaggtatggcagccgctgccggtcgtattgccgaagcgattgagcggggcgaattg
atcgccgtctacggcgattttgatgtcgatgggatcactgcggttgccctgctgacgcag
gcgatcaaggcgatggggggacggattcggccatacattccgcatcgtgcccgcgaaggg
tatggtcttaacaatctggcgattagtcagttggtggccgatggtgtcacattgctgata
acggtcgactgcggcatttccaattatgcagaggtagccgaagccaatcggctcggcctc
gatgtgattgtcactgatcaccaccatccacccatgttgctgccgccagccctggcaata
gtgaatccacgccagcccgactgtgcctatccattcaaaggtctggttggggtcgggatt
gccttcaaagtcgtgcaggcactggcacgctacggtaagcggccagccggtttacgtgga
cgtgatctgctcgatctggttgcgctaggcactgtcgccgatatgggtccactccacgac
gagaatcgggtgttggtacgggccggcttgattgcgctcaatgaaagttcgcgtcctggt
gtcctggcattggtggcggctgccggcctgtcgccgggtatgatcgacagcggcgcaatt
gcgttcgctctggcaccgcgcctcaacgcagccggtcgcttagccgatgcgcgtcgtgcg
tatgagctgctcctggctgatgagcgaatgaaagccgatctgctggctgccgaattgaat
accaccaatcgtgagcggcaggcattgacccggcaattatatgccatggcagaaaccatg
gtgatgcagagtggtcgcaccgaacatccgctgattgtcgtctcgcaccccggttttaac
gcgggtgttatcggattggtcgccgcccgtttggttgagacctatcatcgtccggtaatt
gtgatcgagcaaggcgaggagacatcacgtggatcagcgcgctcgatccccgggtttagt
atcatcgatctgttcgatcaatgtgccgatctctttgtccgttatggtggacatgctgcg
gctgccggttttacgatttccacgaaccagattacggcgctcgaacagcggttactggcc
ctggggagccagcatctgtcagccgaacagctcgtaccacgattgttgatcgatgccact
gtgccattaagtgatttatcgtgggatctatacgctaccctgtgccagctcgaaccgttt
ggacagggtaatccgcagcctgtgttcatgacccccaatgttacagtcatcgatccgcaa
ccgacaactgatggcaatcatctgcggatgcgtgtgcgtgtcggtcagacctcgttcgag
gctatcggttttcactttggtcgcttcgcggatgcgcttcgtcgtcatccaaacatcgat
ctggcgtaccagttggcagttgatgaatggaacggacagcgtcgcttacggctgctggtg
cgcgatttccggcgcgcaacgaagagcgagtga
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