Entry |
|
Name |
(GenBank) excinuclease ABC, A subunit
|
KO |
K03701 | excinuclease ABC subunit A |
|
Organism |
cau Chloroflexus aurantiacus
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:cau00001]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Caur_1688
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:cau03400]
Caur_1688
DNA repair and recombination proteins [BR:cau03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Caur_1688
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Caur_1688
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
complement(2318175..2321072)
|
AA seq |
965 aa
MARTTIVIKGAREHNLKGIDVEIPRDRLVVLTGVSGSGKSSLAFDTLYAEGQRRYVESLS
AYARQFLGQMEKPQVDLIEGLSPAIAIEQKSASKNPRSTVGTVTEIYDYLRLLFARIGHQ
YCHRCGQPVAAQSAQQMVDRVLLLPPGTRFMVLAPVVSQRKGEYKDIFAEAKAEGFVRVR
VDGEIRSLDEEIKLNKKVKHSIEVVIDRLALPAASDNGDREGFITRLTDSIETALRVGEG
KVIISLADEPADPAQPREWMMSESNTCPSCGISFPELTPQMFSFNSPQGACPTCSGLGAR
LEVDPALLVPNDALSIHDGAVTYWGEMRKKQDTWAYKALQAIAAHYRIDLDAPWHTLTQR
QRDAIIYGSGQERIRFSWTNEHGSRGEYYRTWEGLASEIRRRYMQSGSDTMREYYTQYMS
EQPCPDCQGARLRPESLAVRVVGRTIRDVTRMNIAQALDWARELPHHLNETEQAIVGDVL
KEIRERLGFLHNVGLHYLTLDRAAPTLSGGEAQRIRLASQIGSGLVGVMYILDEPSIGLH
QRDNRKLLDSLLRLRDLGNTLIVVEHDLETMQAADWIIDFGPGAGVKGGQIVTAGTPDQV
AQHPTSLTGQYLSGRLTIHIPTSRRSATKGWLTLEGATLNNLRDVTVSFPLGCFIAVTGV
SGSGKSSLITETLYPALANRLNRAQLKPGPFRNLYGLEQLDKVINIDQQPIGRTPRSNPA
TYVKLFDLLRELFAETPEAKLRGYGPGRFSFNLKGGRCEACEGNGEIKIDMQFLADVWVR
CAECKGKRYNRETLQVKYKGKTIADVLDMDVQTALEFFANVPRVRRILQTLHDVGLDYIK
LGQPATTLSGGEAQRVKLAKELARVATGRTIYILDEPTTGLHFADIQNLLRVLHRLVDAG
NTVVVIEHNLDVIKTADYVIDMGPEGGDGGGEVVALGTPEEVARHPTSHTGRFLRDILDL
ATVVE |
NT seq |
2898 nt +upstreamnt +downstreamnt
gtggccaggacgacaatcgtaatcaagggtgcccgcgagcacaacctcaaagggattgat
gttgaaattccgcgtgaccggctggtggtattgacgggtgtcagtggatcgggaaaaagc
tcgctggcgtttgatacgctctacgccgaaggtcaacgacgctatgtcgagagcttatcg
gcctacgcacgccagtttctcggtcagatggaaaaaccgcaggtcgatctgatcgaaggc
ttgtcaccggcaatcgctatcgaacagaagagcgccagtaagaacccgcgctcaaccgtt
ggcaccgttaccgaaatttacgattacctgcgtctgctcttcgcccgcattggtcatcag
tactgtcatcgttgtggtcaacccgtcgctgcgcaatcggctcaacagatggttgatcgg
gtgctcttactcccaccgggcacccgctttatggtgctggcccccgttgtctcgcaacgc
aaaggtgagtacaaagacattttcgccgaagcgaaggcggaaggttttgtgcgggtgcgg
gtagacggtgaaatccgctcgctcgacgaagagatcaagctcaacaagaaagtcaaacac
tcgatagaggttgtcattgaccgtctggccctgccggcggcaagtgataatggtgatcgg
gaaggttttatcacccgcctgaccgacagcatcgaaaccgcattgcgggtaggcgaagga
aaagtcatcatcagcctggccgacgagcctgccgatcctgctcaaccccgcgagtggatg
atgagcgaaagcaatacctgtccgtcgtgtggtatctccttcccggaactgaccccgcag
atgttttcattcaactcgcctcaaggcgcctgcccgacctgtagtggcctgggcgcacgg
ctggaggtcgatccggcgctgctggtgcccaacgacgcgctctcgatccacgatggtgca
gtcacttattggggcgaaatgcgcaagaagcaggacacctgggcgtataaggcgttacag
gcgattgccgcccactaccggatcgatctcgacgcgccatggcatacgctgacccagcgt
caacgcgatgccatcatctacgggagtggtcaggaacgcatccggttttcgtggacgaat
gagcatggttcccgcggcgagtattatcgcacctgggaagggctggcgagcgaaatccgg
cgtcgctacatgcagagcggctcagacaccatgcgcgaatattacacgcagtatatgagc
gagcagccctgcccggattgtcagggtgcccggctccgcccggaaagtctggccgtgcgc
gtggttggccgcacgattcgcgatgtgacccggatgaatatcgcgcaagccctcgattgg
gcgcgtgagttaccccatcacctcaacgagaccgagcaggcaatcgtcggtgatgtgctg
aaagagattcgcgaacgactcggcttcctgcacaacgttggtctgcactacctgaccctc
gaccgggccgcgccaactctctccggcggggaagcgcaacggattcggctggcctcacag
atcggttccgggctggttggcgtgatgtatattctcgatgagccgagtatcggtttgcat
caacgcgataatcgcaaactcctcgactcactgttgcgcttacgtgatctgggtaacacc
ctgatcgtcgtcgaacacgacctggaaacgatgcaggccgccgactggatcattgacttt
ggccccggagccggtgtgaagggcgggcagatcgttactgccggtaccccggatcaggtt
gcccaacatccaacctcgctcaccgggcagtacctctccggtcgactgacgatacacatc
ccaaccagccgtcgttcggcgacgaagggatggttgacgctggaaggagcaacgctcaac
aacctgcgcgatgtcaccgtcagtttcccacttggctgcttcatcgccgttaccggtgtc
tccggttcgggcaaatcatccctcattaccgaaacactttacccggccctggctaatcgc
ctcaaccgtgcccagctcaaacccggccccttccgcaacctgtacggacttgagcagctc
gacaaggtcatcaacatcgaccagcagccgattgggcgcacaccgcgttcaaatccggcg
acctatgtgaagctgttcgatctcttgcgcgagctatttgccgaaacgcccgaagccaaa
ctgcgcggttacgggccaggccgctttagcttcaacctcaaaggtggacgctgtgaagcc
tgtgaggggaacggtgaaatcaagattgacatgcaattcctggccgatgtctgggtacgc
tgcgccgagtgcaagggcaaacgctacaaccgcgagacgttgcaggtgaagtacaaaggc
aagaccatcgccgacgtgctcgatatggatgtgcaaacggcgctggagtttttcgccaac
gtgccacgggtacgccggattctgcaaaccctgcacgatgttggcctcgactacatcaaa
ctcggtcaaccggcgaccaccctctctggcggtgaagcccagcgcgtcaaactggcgaag
gaactggcgcgcgtggcaaccggtcgcaccatctacattctcgatgaaccaaccaccggt
ttacactttgccgatattcaaaacctgctgcgggtgttgcaccgtctggttgatgccggc
aacacggttgtcgtgatcgagcacaacctcgacgtgatcaagacggcggattatgtcatc
gatatggggccggaagggggcgacggcggcggtgaagtggtcgctctgggcaccccggaa
gaggttgcccgccatcccacgtcgcataccggacgatttctacgcgacattcttgatctg
gcaacggtggttgaataa |