Chloroflexus aurantiacus: Caur_1873
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Entry
Caur_1873 CDS
T00639
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
cau
Chloroflexus aurantiacus
Pathway
cau03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Caur_1873
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cau03400
]
Caur_1873
Enzymes [BR:
cau01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
Caur_1873
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Caur_1873
DNA repair and recombination proteins [BR:
cau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Caur_1873
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Zn_ribbon_6
Zn_ribbon_IS1595
Motif
Other DBs
NCBI-ProteinID:
ABY35089
UniProt:
A9WDC2
LinkDB
All DBs
Position
2568315..2569151
Genome browser
AA seq
278 aa
AA seq
DB search
MPELPEVETVARSLAPQLQGRTITGLAKLDWPKMLTPSPDEFAALIAGRRIEAIGRRAKW
LLLSLDGEWTLAIHLRMSGQLLVAEPETSEARHVHFALDLDNGRRLIFNDQRKFGRVHLL
DRQGLAALDAVHGPEPLAADFTPSALAERLQNRRAPIKALLLDQHLIAGIGNIYANEALW
LARIHPLTPGAMLTPEQINELHHAIRHVLQEAITNQGSSLRNYRDGYGRQGTQQEHFNVY
DRAGEPCPRCQSTIERIVVAQRSTYFCPTCQITMQQPE
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgccggaacttcctgaagttgaaactgttgcccgctccctcgccccgcagcttcaggga
cgcacaattaccgggctggccaaacttgactggccaaaaatgctgacaccgtcacctgat
gaattcgccgcactgattgccggacggcgcatcgaggcgattgggcggcgagcaaagtgg
ctgctgctgtcgctcgatggtgagtggactctggccattcatctgcgcatgtcgggacaa
ttgctggttgccgaaccggagacatctgaggcacggcacgtccattttgccctcgatctc
gacaacgggcggcgactcatcttcaacgatcagcggaagtttggccgcgtccacctgctc
gaccggcaagggctggccgctctggatgcagtccacggcccagaaccgctcgccgctgat
tttactccctctgcattagccgaacgcctgcaaaaccgccgggcaccgatcaaagctttg
ctgctcgatcaacacctgatcgccggcattggcaacatctacgccaatgaagcgctctgg
ctggcccgcattcacccgctgactccaggcgcaatgcttacgccggaacagatcaacgaa
ctacaccatgccatccggcacgtgctgcaggaagctatcaccaaccagggcagttcgttg
cgcaactaccgtgacggttatggccgacagggtacgcaacaagagcattttaatgtctac
gaccgggccggtgagccgtgcccgcgctgtcagagcacgattgaacggattgtggtcgct
cagcggagcacctatttctgtccgacctgtcagattaccatgcaacaaccggaataa
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