Chloroflexus aurantiacus: Caur_2500
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Entry
Caur_2500 CDS
T00639
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
cau
Chloroflexus aurantiacus
Pathway
cau03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cau00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Caur_2500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cau03021
]
Caur_2500
03400 DNA repair and recombination proteins [BR:
cau03400
]
Caur_2500
Enzymes [BR:
cau01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Caur_2500
Transcription machinery [BR:
cau03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Caur_2500
DNA repair and recombination proteins [BR:
cau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Caur_2500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
Motif
Other DBs
NCBI-ProteinID:
ABY35706
UniProt:
A9WI15
LinkDB
All DBs
Position
3333052..3334059
Genome browser
AA seq
335 aa
AA seq
DB search
METLELSFITPRITLVAAAENYGRFAIAPLQRGHGSSLGNALRRVLLSSIPGAAVTRIKV
SGVIHEFSSIPGVVEDGTQLVLNIKGIRLRSYSDRAVALQLIKQGPGPVFARDIDAPSTV
EIVNPQHYICTIDDEHTTFEMQLTVERGRGVQLADTVSGMPIGEIAVDALFSPIPRVNFL
VEEMGDDPLTGYDRLILEIWTDGTIKPGDALSHAAQILAQYFGRIVNLNQPEEPEPSAHL
PPPIPEEIASRTIDELGLSTRTYNSLRRAEIHTIGQLLRLDDRGLMSIRNLGAKGIEEIH
QRLEALGYRSGSSSRLPAAPSGETAHPGESSHKEE
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggaaacacttgaattgtcgtttattacccctcgcattactcttgtcgctgcggctgag
aattacggtcggtttgcaattgctcccttacagcgtggtcatggctcatcactagggaat
gcgcttcgtcgggtgttgctctcgtctattcccggtgctgctgtaacccggatcaaggtg
tcaggagtcattcatgaattcagcagcattcccggtgtggttgaagatggcacgcaactc
gtcctcaatatcaaagggattcgtctccgttcctacagtgaccgtgcggtagcactacag
ttgatcaaacagggtcctgggccggtgttcgcgcgcgacattgatgcccccagcacggta
gaaattgtgaatcctcagcactacatctgcaccatcgacgacgagcatacaacgtttgaa
atgcaactgaccgtggagcgtgggcggggagtgcaattggccgatacggtgagtggcatg
ccaattggcgaaatcgcggtggatgccctcttcagcccaattccccgtgtcaactttctg
gttgaagagatgggggatgatccgctgaccggctatgatcggctgatcctcgaaatctgg
acggatggcaccatcaaaccgggtgatgcattgagccacgcggcgcagattctggcccaa
tattttgggcggatcgtgaatctgaaccaaccggaagagccagaaccatcggcacatcta
ccaccgcctatccccgaagagattgccagtcggacaattgacgaacttggtttgagcaca
cgtacctacaatagcctgcgacgggcagagattcacacgattggccagttgttgcggctt
gatgaccgcggattgatgagtatccgaaacctgggtgcgaagggtattgaagagattcat
cagcgtctggaggcgcttggctatcgttctggctcatcgagccgcttaccggcagctcca
tccggtgaaacagcgcatcccggcgaatcatctcacaaagaggagtaa
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