Chloroflexus aurantiacus: Caur_3071
Help
Entry
Caur_3071 CDS
T00639
Name
(GenBank) sigma-54 factor interaction domain-containing protein
KO
K05880
transcriptional activator for dhaKLM operon
Organism
cau
Chloroflexus aurantiacus
Brite
KEGG Orthology (KO) [BR:
cau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cau03000
]
Caur_3071
Transcription factors [BR:
cau03000
]
Prokaryotic type
Other transcription factors
Others
Caur_3071
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
Mg_chelatase
PAS_4
PAS_10
HTH_50
PAS
AAA_16
PAS_9
AAA_2
AAA_5
Xre-like-HTH
DUF3846
HTH_23
Motif
Other DBs
NCBI-ProteinID:
ABY36270
UniProt:
A9WGV4
LinkDB
All DBs
Position
4123232..4125109
Genome browser
AA seq
625 aa
AA seq
DB search
MATPSIPPIQRSWARCQARGLDPTCAPQTGMINLSGWSHLQALVRSSIEDLYQLSDHPGF
VVVICDDQGTIIDMAGDSAIMAQAQQYGIGYGITLAEEYAGTNAVDLALREALPCQTAGD
DHYCQWLQSFALAAAPIFSPDGRALGALAILSLAEERHPYALGMVIAAAQAFHSQLRAER
LLNEANDQLTELYATLDTINEGLIFVGPNGEIRRLSRRVASILGINVRSAAGRPLTSVIS
PPPAIAAALQQLSTLEEQEVIWQTPTGAQAVICGVRPVWDRSRRYLGSVITLRPTESVRQ
LVQQVVGARAAFTFRDIVGQSESMRQAMRQARLAAAGRGAILLRGEAGVGKEIFAQAIHN
ASSRAGGPFIRVSCAAIPRQLIDSELFGVEGTDRQPGRPGKLELAHGGVLYLEAIDALSF
DQQTSLLRVIEMGRVIRTGGARPIPVDVRVITTGHGLEQLVEEGRFRADLYARLSAFVVD
IPPLRQRGDDIILLANHMIRRLSEQFGRQVALDPDALAALRTYPWPGNVRELEVVLEQMV
QTNAKSVLTVSDLPPAIARHTTPLLISDSPRLAETQELSERDAILRAGRAAGGRLGRAAA
LLGISRATLWRKMTRYRISREDMVP
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atggcgacaccatccatcccaccgattcagcgttcgtgggcacgttgtcaggcacgtggg
ctagacccgacgtgtgcaccgcaaaccgggatgattaatctgagtgggtggagccatctg
caagccctggttcgttcgtcaatagaagatttgtatcaacttagtgaccatcccggtttt
gtggtggtcatttgtgatgatcagggaacgatcatcgatatggccggggatagcgccatt
atggcgcaggcgcagcagtatgggattggatatgggatcacgctggccgaggagtatgcc
ggtactaatgcagttgatctggctttgcgcgaagctctgccctgtcagaccgccggtgat
gaccactactgtcagtggttacaatcgtttgcgctggctgcggcaccgatttttagccct
gatggtcgggcattaggtgcgctagccatcctcagcctggccgaagagcggcatccgtat
gcgcttggaatggttatcgcggcagcgcaggcatttcatagtcaattacgtgctgaacgg
ttactgaacgaagcgaacgatcagcttaccgaactctacgcgacgcttgatacgatcaac
gaagggttgatctttgttggccctaacggggaaatccggcgcttgagtcggcgtgtcgcc
agcattctgggtatcaatgtccgctcggctgccgggcgcccgctgaccagtgtgatttca
ccgccacctgcaattgccgctgcgctccagcaactcagtacgctcgaagagcaagaggtg
atctggcaaacaccgaccggagcacaggcggttatctgtggggtgcgcccggtgtgggat
cgcagccgtcgctacctgggcagtgtgatcacgctgcgaccaactgaaagtgtgcgtcaa
ctcgtccaacaagtggtcggggcacgggcggcatttacgtttcgtgatattgttggtcag
agtgagagtatgcggcaggcaatgcgccaggcgcggctggcggctgccggtcggggggca
attttgttgcgaggtgaagccggtgtcggcaaggagatttttgcccaggcgatccacaat
gccagtagtcgcgccggcggcccgttcattcgcgtctcgtgtgcggcaattcctcgccag
ttgattgatagcgagttatttggggtggaggggacggatcgtcagcctggacgccctggg
aagctggagctggcccatggaggcgtattgtatctcgaagctatcgatgccctctcgttc
gatcaacagaccagtctgctgcgggtgatagagatgggacgggtgatccgtaccggtgga
gcgcgcccgataccggttgatgtgcgggtgattaccaccggtcatggtcttgagcaactg
gtggaagagggtcgttttcgcgccgatctgtacgcccgcctgagtgcgtttgtggttgat
attccaccgctgcggcagcgtggcgacgatattatcctgctggctaatcatatgatccgg
cggttgagtgaacagttcgggcgacaagtggcgctcgatccagatgcgttagctgcgttg
cggacgtatccgtggccggggaatgtccgtgaactggaagtggtgctggagcagatggta
cagacgaacgccaagagtgtgctcacggtgtcggatttgcccccggccattgctcgccac
accacaccgttactcatctctgacagcccacgtctggccgaaacccaggagttgagtgaa
cgagacgccatcttacgggccgggcgggcagcgggcgggcggttaggccgggcagccgcg
ttgttggggatcagtcgggccaccctctggcgtaagatgacccgttatcgaatttcgcgt
gaggatatggtaccgtag
DBGET
integrated database retrieval system
