Chloroflexus aurantiacus: Caur_3842
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Entry
Caur_3842 CDS
T00639
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
cau
Chloroflexus aurantiacus
Pathway
cau03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Caur_3842
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cau03400
]
Caur_3842
Enzymes [BR:
cau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Caur_3842
DNA repair and recombination proteins [BR:
cau03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Caur_3842
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
PriA_3primeBD
ResIII
PriA_C
Helicase_C
MarR_2
GntR
PIF1
MarR
HTH_27
HTH_24
LexA_DNA_bind
Motif
Other DBs
NCBI-ProteinID:
ABY37019
UniProt:
A9WCQ7
LinkDB
All DBs
Position
complement(5126782..5129310)
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AA seq
842 aa
AA seq
DB search
MNPVSELVADVAVLTDSLPSQHQGIFSYRVPDHLQAAIAIGQLVWVPLRQQQVQGVVLAM
QRRTVSGLRDLIDLVDPDLSIPQLTIQLAHWVAENCYTTLAAVLDLCLPPGMIRQAVTTW
RATAAGLTCELGALPERERAILFYLRRHGELSEADLRAALRGSDANLRAAYRSLAERGLI
TRRLRIDPPRVRPQQEQFVRLTLPDLDQAIAELRRAPRQAAALRWLAERTTSDPPTVNEL
RRATGIDSTGIRALERRGFVQLVGREIYRDPLATVHPATDTPPPLTSAQRVAYETIVTAL
EAGTGGRFLLYGITGSGKTEVYLRLIARALRLGRQALVLAPEIALTTQLVRRFVARFGHQ
LAVLHSGLSDGERYDEWRRLRRGEARVAIGARSALFAPLPDLGLVIVDEEHEPGYKSDAA
PRYHARDAALHLADLAGVTVVLGSATPSVETYYAARNGQIQLLELPERIGAQIGVDGLVH
SRPLPLPPVRIVDMRHELQQGNTSIFSIKLQHALAQTLARGQQAILFLNRRGAASFVFCR
DCGYVARCERCAAPLTVHYDTATTAEAGESVRVLICHSCGQRTATPVVCPQCLSHRIRAS
GIGTQRVAEVVRELFPDARVARWDRDSISGKNAHDALLEAMVRHEIDVLVGTQMIAKGLD
LPLVGLVGVVLADTGLHLPDFRSGERAFQLLTQVAGRAGRRSEGAQVIIQTYQPDHYALQ
AACEHDYRAFFREEIAFRRALAYPPFGRLVRFVTTAATESICRRQAEQLAVTLQTYITGR
DLVGWRLIGPAPAFFRRQRDRWRWHVLLRVPPATDIREIRLALDAVGPLYGWVIDIDPVH
VL
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atgaatcctgtctctgaactggtggctgatgtggccgtcctcacagactccttgccatcc
caacaccagggcatcttctcgtaccgtgtacctgatcatttgcaagcggccatcgcgata
ggacaactggtgtgggtaccgttgcgccaacagcaggttcagggggtggttctggcaatg
cagcgccgcactgtcagtgggttgcgcgatctgattgacctggtcgatcctgatctatcg
atcccacaactgacgattcaattagcgcattgggtggccgagaactgctatacaacgctg
gcagcggtgcttgatctctgtttgccgccaggcatgatccggcaggcggtgacaacctgg
cgggcaacggcggcagggcttacgtgtgaattgggtgcattaccagagcgtgagcgggcg
atcctcttttatttgcgtcggcacggggaattgagtgaggccgacttgcgggcggcgctg
cgcggaagtgatgcaaatctgcgggctgcgtatcggtcattggctgaacgaggtctgatt
acacgccgcttgcgtatcgatccaccgcgagtacgtccccaacaagagcagtttgtccgg
ttaacgttgcccgatctcgatcaagcaatagccgaactgcgccgtgcacccagacaggca
gcagcattgcgctggctggctgaacggacgacaagcgatcctcctacggtgaatgaatta
cggcgggcgacaggtattgacagtacagggatacgtgcgcttgaacggcggggttttgta
caactggttggtcgtgaaatctatcgggatccactggcaacagtacatccggccaccgat
acaccgccaccattgacaagtgctcagcgggtagcgtatgagacaatcgtgactgcgctt
gaagccggtacgggcggaaggtttctgctctatgggatcaccggtagcgggaaaactgaa
gtctacctgcgactgatcgctcgtgcgttacggcttggccgacaggcattggtactggcg
ccggagattgccctcacgacccagttagtccgtcgctttgtggctcgttttggtcatcaa
ctggcggtcctgcatagcgggttaagtgatggtgagcgctacgatgagtggcggcgattg
cggcggggtgaagccagggtggctatcggtgcacgttctgctcttttcgcaccattaccc
gatcttggtctggtgattgtcgatgaggagcacgaacctggctacaaaagcgatgcagca
cctcgttaccatgcgcgtgatgcagcattacaccttgccgatctggccggagtaacggtc
gtccttggtagtgcgaccccaagcgttgaaacctactatgccgcccgcaatggtcagatt
cagttgctcgaattaccagagcgaattggtgcccagattggcgttgatggtctcgttcac
agtcgccccttgccgctgccgccagtgcgtattgttgatatgcggcatgagctacagcag
gggaatacatctatcttctcgatcaaactgcaacacgcgctggcgcagacccttgcccgt
gggcaacaggcgatcctctttctcaatcgccggggagccgcttcctttgttttttgtcgg
gattgtggttacgttgcccgttgtgaacggtgtgccgcgccactcaccgttcattacgat
acggcaaccactgctgaagccggcgagtcggtgcgcgttttaatctgccattcatgcggt
cagcgcacggctacgccggtagtctgtccacaatgtctcagtcaccgcattcgcgcctcg
ggtatcggcacacagcgcgttgccgaggtggtacgtgaattgtttcccgatgcacgggta
gcacgctgggatcgggatagtatcagtggaaagaatgcccatgatgccctgctagaagca
atggtacgccacgagatcgatgtgctggtcggtacgcagatgattgcgaaagggcttgat
ctacctctggttgggttggtcggtgtggtattagccgataccggtctgcatctgcccgac
tttcgtagtggcgagcgggcatttcaacttctgacccaggttgctggacgagcagggcga
cggagtgaaggggcgcaggtcattattcagacctatcaacccgatcactatgcacttcag
gccgcctgtgagcacgactaccgggcattttttcgggaagagatcgccttccggcgggca
ctggcttatccgccctttggccgattggtacgtttcgtcaccaccgcagcaaccgagtca
atctgtcgacgacaggccgaacagcttgctgttaccttgcagacgtacatcaccggtcgt
gatttggtcggctggcgtctgatcggaccggcgccggcattctttcgccgacaacgtgat
cggtggcgctggcacgtgttgttgcgggtgccaccggctacagacatccgggagatacgt
ctggccctggacgcggttggcccgttgtacggttgggtgatcgatattgatccggtgcat
gtgttgtga
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