Carassius auratus (goldfish): 113037748
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Entry
113037748 CDS
T07313
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
113037748
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
caua03021
]
113037748
03036 Chromosome and associated proteins [BR:
caua03036
]
113037748
Transcription machinery [BR:
caua03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
113037748
Coactivators
SAGA/TFTC/STAGA complex
113037748
Chromosome and associated proteins [BR:
caua03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
113037748
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
DUF3106
DUF4337
Motif
Other DBs
NCBI-GeneID:
113037748
NCBI-ProteinID:
XP_026050880
Ensembl:
ENSCARG00000006472
UniProt:
A0A6P6ISW2
LinkDB
All DBs
Position
20:15061989..15084749
Genome browser
AA seq
866 aa
AA seq
DB search
MSETSVSDKLDNDQSRAPTENEEINNNTPKSNIEESLEISQTTFDKKKEVSDSNANANTS
ENSKPDVASNDGEGEQPKPKTDTDLSNTANVSLRPVTVKSSASSEAAPKVIAGPAQVRST
TPVVIGARVVTSNVQGPGATSLALAPQPGRVSVSSVAISQPRVTTLTTAKGAVLTLPRIS
TPSQSVPMTRTPQTVPLQLPANFQVPQGMVLIRSDSGQLMLVSQQALAQAQGMLPKPASA
NASAIVRPPSSQATVTTTPIIRVSFPPSSASATTNIKLNPTTGTAVQKPPSATGTAIFTP
SCTAGATIIKPAGVIRTAIRKPSSTMGPVIKASQMTPNSSTPGTFNQRTNSVTATTIINT
SAVKSGGKGALSTQGNAPRMTSPNVPARSSTNTSSTPVTVTAETLENVKKCKNFLVTLMK
LASSGTRSANMAQNVKALVKALLDGKLEAEEFTEKLYMELKSSPQPYLVPFLKRSLPAVR
QLTPNSQLFIQQCDQLKPSDSTPTKAANQKSTASLSSSLKPNQPTRMAQLVIQQPKGVIV
KQSLTSAQTSLPALNQTQPKQMLIQTNANAAGAVRRQSILQASKTHFSQPLLPAQPHGFK
DSTSGSFRDDDDINDVASMAGVNLSEENARILASGSELVGSVIRSCQEEPFLFPSALQSR
VLQIGGSLSITEVCPDVLELLSLATQERLRDLLEKITIVAQHRQISYKSQMCVSSYSNVS
CGEDDWRYSQTNDTRSQLKFLEQLERLEKQRREEEEREALLRIARSRSNSEDPEQQRLKQ
RAKEMQQLELAQMEHRDANLAALAALGPRKRKSLEAPGSGANQLLGSCGQFATRAPVRIT
LRDLTFCMEQDPTFRHTLMLYRAFLG
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaaacatcggtttcagataaattagacaatgatcagtctcgcgcgccaacagaa
aacgaagaaatcaacaacaacactccaaaaagcaacattgaggagtctttggaaatttca
caaaccacatttgacaagaaaaaagaggtttcagactcaaacgctaatgctaacacctct
gaaaacagcaaaccagatgtagcttctaatgatggggaaggagaacagccaaaaccaaag
acagatactgatttatcaaacactgctaacgttagtctgcggcctgtaaccgttaagagc
tccgcctcatctgaagctgccccaaaggtcatagcaggccctgcacaggtcagatccacc
acaccagtggttataggggccagggtggtgacatctaatgttcagggacccggggccacc
agtttggcactggctcctcagcctggaagggtctctgttagctctgtagccataagccag
cccagggtcaccacactgaccacagccaaaggggcagtcttgacattgccaaggatttcc
accccatcacaaagtgtaccaatgacacgcacccctcagactgtgccactgcagctgcct
gccaacttccaggtaccacaaggaatggtgttaatccgcagtgacagcgggcagttgatg
ttggtatctcagcaggctctggcccaggctcagggaatgctgccaaaaccagccagtgcc
aatgcctctgctatagttagacccccatcctcacaggcaactgtaaccactacaccaatc
atcagagtttcttttccaccttccagtgcatcagctactaccaatattaaacttaacccc
actacagggactgccgttcagaaaccaccctccgctacaggaactgcaattttcacgcca
tcatgtacagcaggagctaccatcattaaaccagccggtgttataaggacggctatcagg
aagcccagttctaccatggggcctgttatcaaagccagtcaaatgactccaaacagcagc
acaccggggacctttaaccagaggactaattctgtcactgcaactaccataattaatacc
tctgctgtaaagtctggtggcaagggtgctctctccacccagggtaatgccccacgtatg
acgtcccctaatgtaccagccagatccagcacgaacacatcatcaaccccagtcactgtt
acagctgagaccttggagaatgtgaagaagtgtaaaaactttctggtcactcttatgaag
ctggcatcgagtggcacacgctcggccaacatggctcagaacgtcaaagctcttgtcaaa
gccctgctggatgggaaactagaggcagaggagtttactgaaaaactctacatggagctc
aagtcatcccctcagccatatctagtgcctttcctgaagaggagcctgccagctgtccgt
cagctcaccccaaactcgcagctcttcattcagcagtgcgaccaactcaagccctcagat
tcgacaccaaccaaggccgcaaaccagaagtccactgcgtctctcagctcctccctcaag
cccaaccagccaaccagaatggctcagctggtgatccagcaacctaaaggagtaatcgtc
aaacagtctttgacgtcagctcagacaagtttacctgcactgaaccaaactcaacccaaa
cagatgctcattcaaaccaatgctaacgcagcaggtgctgttcggcggcagtccatcctt
caggcatctaaaacacacttttcccaaccactccttccagcgcaaccacacggcttcaag
gacagcacctcgggctctttccgagatgatgatgacattaatgatgtggcttccatggcc
ggcgtgaacctgagtgaggagaatgctcgtattttggcctctggctccgagcttgtggga
tcagtgatccgctcctgtcaagaggagccctttttattcccatcagcccttcagtcacga
gtgctgcagataggtggatctttgagcatcacagaggtctgtcctgatgtccttgaactg
ctctctcttgctacacaagagaggcttcgggacctgctggagaagataaccattgtagca
cagcatcgacagatttcttataagtctcaaatgtgtgtctcgtcgtactctaatgtttcc
tgtggtgaggatgattggcgttacagtcagaccaatgacacgcgctctcagctgaagttc
ctggagcagctggaaagactggagaaacagaggagggaggaagaggagcgagaagccctg
ctccgcattgcccggagtcgctcaaacagtgaagacccagagcaacagcgtctgaaacag
cgagccaaagagatgcagcagttggagttggcacagatggagcacagagatgcaaatttg
gcagcgctggcagccctggggccacgtaagaggaaatctctggaggctcccggctcaggg
gccaaccagttgttaggttcatgtgggcagtttgctactcgagcaccggttcgaatcact
ttgagagatctgaccttctgcatggagcaagaccccacattcagacacactctcatgctg
tatagagcatttctaggctag
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