Carassius auratus (goldfish): 113037755
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Entry
113037755 CDS
T07313
Name
(RefSeq) tenascin-R-like
KO
K06252
tenascin
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04510
Focal adhesion
caua04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
113037755
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
113037755
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
caua00536
]
113037755
Glycosaminoglycan binding proteins [BR:
caua00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
113037755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
FN3_Tor_3rd
Fn3_Dep-1_2nd
Fn3_Dep-1_4th
Interfer-bind
DUF4998
GH101_dom-5
DUF3515
Motif
Other DBs
NCBI-GeneID:
113037755
NCBI-ProteinID:
XP_026050894
Ensembl:
ENSCARG00000016934
UniProt:
A0A6P6ISX5
LinkDB
All DBs
Position
2:23900863..23937736
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AA seq
1044 aa
AA seq
DB search
MIHFHVISSFFLYTVSPPMNLQVRGVSENSIDLEWEGPVILTDFLITYAPTTPGGVQLEI
RVPGNVTNTTIKGLEPGLEYTINVYAVIDNIISAPLNTLVSTYLTNPDGLLFKSIMETSV
EVQWQPLDYLFDGWEISFIPKDNDGGMTAQLPSTITLFHQTGLRPGEEYTVNLVALKDQG
RSQPVTATIITLIDGPTQLVVRDVLDTVAFVEWSPPKAKVDQILLRYGLVGVDGPKTIFR
LQPTLSQYSLQVLRPGSTYEVSVSGVRNGTESEAISTEFTTEIDAPKNLRVLSKTSTSLE
LEWDNSEADVEGYRVVYSTLAGDQYDKVIVPLNDGATTKTTLTDLLPGTEYGIGISAVLG
ANQSTPATMNARTGLDVPLDLTVTASTDNTITLLWGTVQGPIDHYRVTYTSSTGVTTELT
VPKDVTTTTLTGLEPGTEYTITVAAQRGRQKSTAATIDAFTGFRPITQLFFSDVTSDSLT
VAWSAPAPPADAFILNYNAQDSRDDSEIALDGSKTGITLTGLLPSRRYTVTLVTMHGNVT
SKPVIGSVTTGMDPPRDMTVLYVTEESVTISWIQPYAPFDYYKMSYQSPKGRVDNVVIDN
DVTNYTLSSLHPAAEYEIKLNAVRGSQESKVITTTVFTAMDMPMDLTALNVTPQGALLRW
NPPVSSVDNYVVTLTRNQVMADTFLVEGNKQEYQLSQLIPSTTYSVALYATKGPLTSGTV
IANFVTPMDAPQNLTASEINHRSALISWQPPIADIDNYMLTYKAADGSRKELILDAEDTW
IRLEGLAETTEYTVRLQAARGLETSAIVSTSFTTGNRLFPTPQNCAQHLLNGETLSGIYT
IYINRDFSQGVQVYCDMITDGGGWIVFQRRQNGLTDFSRKWSDYKIGFGNLEDEFWLGLD
SIMKIAAQGRYELRIDMKDGQESVYANYDRFSIGDSKSLYKLRIGEYNGTAGDSLSYHQS
RPFSTKDKDNDIAVTNCAMSYKGAWWYKNCHRANLNGKYGESRHSQGINWYHWKGHEFSI
PFVEMKMRPFNYRSISGKRRRSTH
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atgattcattttcatgtgatatcctcattctttttatacacagtgtcacctcctatgaat
ctgcaagttcggggagtgtccgagaacagcattgatctggagtgggaggggcctgtgatc
ctgacagactttctcatcacttacgcacccacaacccctggtggagtccaactggagatc
cgagtcccaggaaatgttaccaacaccaccatcaaaggattggagccgggtctggagtac
accatcaatgtgtacgcggtgatcgacaacatcatcagtgccccactgaacaccttagtc
tccacctatctcacgaatccagacggtttactcttcaaatccatcatggagacgtccgtg
gaggttcagtggcaacccttagactacttgtttgatggttgggaaataagcttcattccc
aaggacaatgatggagggatgacagcacaactacccagtaccatcacgttgttccaccaa
acagggctgcggcctggggaagaatacactgtcaaccttgtagccttgaaagaccaagga
aggagccagcctgttactgcaaccattatcacattgattgatgggccaacacaacttgtt
gtacgagatgtcttagacacggttgcctttgtggagtggagcccacccaaggctaaagtg
gaccagattttattgcggtatgggctggtaggggtggatggaccaaagaccatctttcgc
ctgcagcctactctgagccagtactccctccaagtcctgaggcctggatccacgtatgaa
gtatcagtcagtggagtccggaatggcactgagagtgaagccatttccacagagtttaca
acagaaatcgatgcaccaaagaacctgagagtgctgtcaaaaacttccactagcctggag
ctggaatgggacaatagtgaggcagatgtagaaggctacagggtggtttacagcacactg
gctggtgatcagtatgacaaagtcattgtcccactcaacgatggcgccaccaccaaaact
actctcactgatttactgcctggcacagagtatggcataggaatttcagcagttctaggt
gccaaccaaagcaccccagctacgatgaatgccagaacgggtctggatgtccccttggat
ttgactgtcacagcctcaacagacaacaccattaccctgttgtggggcacagtgcagggg
cctattgatcactacagggtgacctacacttcctccactggagtgacaactgagctgacg
gtgcccaaggatgtcaccaccaccacactgacaggtctagagcctggcactgagtacacc
attacagttgcagcacagagaggcaggcagaagagcactgcagccactattgatgccttc
acagggttccgccctatcacacagctcttcttctctgatgtcacttctgattcattgact
gtggcatggagtgcaccggctccgcctgctgacgcattcatcttgaactacaatgctcag
gactccagagatgattctgagattgctctagacgggtccaaaaccggtatcaccctcact
ggtctcctgccctccaggcggtatactgttaccttggttaccatgcatggcaatgtgacc
tcaaagccagttattggctcagtcacaacaggaatggaccctccccgagatatgactgtg
ctgtatgtcacagaggaatctgtaaccatttcatggattcaaccatacgcaccctttgat
tactacaaaatgtcttaccaatcaccaaaaggtagggtggataatgtggtgattgacaac
gatgtcaccaactacaccttaagtagcctccatccagcggcggagtatgaaatcaagctg
aacgcagtgagaggaagccaagagagcaaggtcatcaccactactgtcttcacagctatg
gacatgcctatggacctcactgcgttgaatgttacacctcagggggctctgctacgttgg
aacccccctgtttccagtgttgataactacgtggtcaccctcacccgtaaccaagttatg
gcagacaccttcttagtggagggtaacaagcaggagtaccagctgagtcagctcatcccc
agcaccacctattcagtggctctttatgccactaaaggtcctctcaccagtggcaccgtc
atcgccaactttgtcacacccatggatgcgccccagaacctgacagctagtgagattaac
catcgaagtgccctcatatcctggcagccgcccatcgcagacatcgataactacatgctg
acctacaaagcagcggatggcagtcgaaaggagctgatcttagatgccgaagacacatgg
atccgtctcgaggggctggcggagaccactgaatatactgtgagactgcaagccgctaga
ggattagagaccagcgccattgtttctacatctttcacaacaggaaaccgattgtttccc
acgccacagaactgtgcgcaacacctccttaacggagagacactgagtggaatttacacc
atatacatcaacagagacttcagccaaggtgtgcaggtttactgcgacatgatcaccgac
ggaggcggctggatagtgttccagcgacgtcagaacggtttaactgatttctccaggaag
tggagtgactacaagatcggctttggcaacctggaggatgaattctggctcggcttggac
agcattatgaagattgcagctcaaggtcgttacgagctccgcattgacatgaaagatggc
caggagtctgtatatgccaactatgacaggttttccatcggagattccaagagcctctac
aaactgaggataggagagtataatggcactgcaggtgactctctaagctaccaccagagc
agaccgttctctactaaggacaaggacaatgatatcgccgtcaccaactgtgcaatgtcc
tacaagggagcctggtggtacaaaaactgtcatcgagccaaccttaacggcaaatacggc
gagtcgagacatagtcagggtataaactggtaccactggaaaggccatgagttttccatc
ccttttgtggagatgaagatgagacctttcaactaccgcagcatcagtggcaagcggagg
aggtccacccattaa
DBGET
integrated database retrieval system