Carassius auratus (goldfish): 113038162
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Entry
113038162 CDS
T07313
Name
(RefSeq) serine/arginine-rich splicing factor 1B
KO
K12890
serine/arginine-rich splicing factor 1
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03040
Spliceosome
caua05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113038162
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
113038162
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
caua03041
]
113038162
Spliceosome [BR:
caua03041
]
Common components
Common spliceosomal components
SR proteins
113038162
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_3
CoV_nucleocap
Nup35_RRM_2
TP2
Motif
Other DBs
NCBI-GeneID:
113038162
NCBI-ProteinID:
XP_026051177
Ensembl:
ENSCARG00000010218
UniProt:
A0A6P6IXL1
LinkDB
All DBs
Position
21
Genome browser
AA seq
243 aa
AA seq
DB search
MSGGVIRGPAGNNDCRIYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPPFAFVEF
EDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGGGRGGGGGVGAPRGRYGPPSRRSEYRV
IVPGLPPSGSWQDLKDHMREAGDVCYADVFRDGTGVVEFVRKEDMTYAVRKLDNTKFRSH
EGETAYIRVKVDGPRSPSYGRSRSRSRSRSRSRSNSRSRSYSPRRSRGSPRYSPRHSRSR
SRT
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgtcagggggtgtgattcgagggcctgcagggaacaacgactgtcggatttacgttggt
aatttaccccccgatattcgcaccaaggacgtggaggatgtgttttataaatatggagcc
attcgggatatcgaccttaaaaacagaagaggaggtccgccgtttgcgttcgtggagttc
gaggacccgagagatgcggaggatgctgtgtatggacgagatggctatgactatgatggc
tatcgtcttcgagtggagttccccaggagtggcaggggaggtggaagaggtggaggtggt
ggagttggagctcccagaggcagatatggccctccatccaggcgttcagagtacagggtc
atagtgccaggacttcctcctagtggcagctggcaggacctaaaggatcacatgcgtgaa
gcaggtgatgtatgttatgctgacgttttccgagatggcaccggcgttgtggagtttgtg
cgcaaagaagacatgacctacgccgttcgaaagctggataacactaagttccggtcacat
gagggagagacggcttacattcgcgtaaaggtggatggcccacgcagccccagttacggg
cgctcgcgttcacgcagccgcagcaggagtcgcagccggagcaacagccgcagtcgcagc
tactctccacgccgcagccgaggatcaccacgttactcgccccgccacagccgctcccgt
tcccgcacctaa
DBGET
integrated database retrieval system
